RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 COX5AP20674 150 aa14.81□□□□□ -0.04
CACNA1A-259ENST00000638114 ADSLP30566 484 aaPredicted RBP14.81□□□□□ -0.04
CACNA1A-259ENST00000638114 HOXC12P31275 282 aa14.81□□□□□ -0.04
CACNA1A-259ENST00000638114 H3F3AP84243 136 aa14.81□□□□□ -0.04
CACNA1A-259ENST00000638114 HOXC5Q00444 222 aa14.81□□□□□ -0.04
CACNA1A-259ENST00000638114 CDK6Q00534 326 aa14.81□□□□□ -0.04
CACNA1A-259ENST00000638114 CEACAM7Q14002 265 aa14.81□□□□□ -0.04
CACNA1A-259ENST00000638114 OR7A5Q15622 319 aa14.81□□□□□ -0.04
CACNA1A-259ENST00000638114 OTUD3Q5T2D3 398 aaPredicted RBP14.81□□□□□ -0.04
CACNA1A-259ENST00000638114 FBXW9Q5XUX1 488 aa14.81□□□□□ -0.04
CACNA1A-259ENST00000638114 REEP3Q6NUK4 255 aa14.81□□□□□ -0.04
CACNA1A-259ENST00000638114 PAQR6Q6TCH4 344 aa14.81□□□□□ -0.04
CACNA1A-259ENST00000638114 CASP12Q6UXS9 341 aa14.81□□□□□ -0.04
CACNA1A-259ENST00000638114 P3H2Q8IVL5 708 aa14.81□□□□□ -0.04
CACNA1A-259ENST00000638114 C10orf111Q8N326 155 aa14.81□□□□□ -0.04
CACNA1A-259ENST00000638114 TMEM204Q9BSN7 226 aa14.81□□□□□ -0.04
CACNA1A-259ENST00000638114 IKZF5Q9H5V7 419 aa14.81□□□□□ -0.04
CACNA1A-259ENST00000638114 ESRP2Q9H6T0 727 aaKnown RBP14.81□□□□□ -0.04
CACNA1A-259ENST00000638114 LEF1Q9UJU2 399 aaPredicted RBP14.81□□□□□ -0.04
CACNA1A-259ENST00000638114 CORO2BQ9UQ03 480 aa14.81□□□□□ -0.04
CACNA1A-259ENST00000638114 ZNF469Q96JG9 3925 aaPredicted RBP14.81□□□□□ -0.04
CACNA1A-259ENST00000638114 C2CD3Q4AC94 2353 aa14.81□□□□□ -0.04
CACNA1A-259ENST00000638114 SETD2Q9BYW2 2564 aaPredicted RBP14.8□□□□□ -0.04
CACNA1A-259ENST00000638114 VPS13CQ709C8 3753 aa14.8□□□□□ -0.04
CACNA1A-259ENST00000638114 ARID1AO14497 2285 aa14.8□□□□□ -0.04
CACNA1A-259ENST00000638114 A0A0G2JND7 137 aa14.8□□□□□ -0.04
CACNA1A-259ENST00000638114 LIPT2A6NK58 231 aa14.8□□□□□ -0.04
CACNA1A-259ENST00000638114 A8MVM7 634 aa14.8□□□□□ -0.04
CACNA1A-259ENST00000638114 CLOCKO15516 846 aa14.8□□□□□ -0.04
CACNA1A-259ENST00000638114 AKR7A3O95154 331 aa14.8□□□□□ -0.04
CACNA1A-259ENST00000638114 GGT1P19440 569 aa14.8□□□□□ -0.04
CACNA1A-259ENST00000638114 NTF4P34130 210 aa14.8□□□□□ -0.04
CACNA1A-259ENST00000638114 KRT73Q86Y46 540 aa14.8□□□□□ -0.04
CACNA1A-259ENST00000638114 ZNF433Q8N7K0 673 aaPredicted RBP14.8□□□□□ -0.04
CACNA1A-259ENST00000638114 C3orf49Q96BT1 292 aa14.8□□□□□ -0.04
CACNA1A-259ENST00000638114 SIKE1Q9BRV8 207 aa14.8□□□□□ -0.04
CACNA1A-259ENST00000638114 TAPBPLQ9BX59 468 aa14.8□□□□□ -0.04
CACNA1A-259ENST00000638114 ASB6Q9NWX5 421 aa14.8□□□□□ -0.04
CACNA1A-259ENST00000638114 SLC9A8Q9Y2E8 581 aa14.8□□□□□ -0.04
CACNA1A-259ENST00000638114 RNF115Q9Y4L5 304 aa14.8□□□□□ -0.04
CACNA1A-259ENST00000638114 FLVCR1Q9Y5Y0 555 aa14.8□□□□□ -0.04
CACNA1A-259ENST00000638114 GMEB1Q9Y692 573 aa14.8□□□□□ -0.04
CACNA1A-259ENST00000638114 CIB4A0PJX0 185 aa14.79□□□□□ -0.04
CACNA1A-259ENST00000638114 CCT8L1PA6NM43 557 aa14.79□□□□□ -0.04
CACNA1A-259ENST00000638114 HS3ST1O14792 307 aa14.79□□□□□ -0.04
CACNA1A-259ENST00000638114 ANGPT2O15123 496 aa14.79□□□□□ -0.04
CACNA1A-259ENST00000638114 ARHGEF9O43307 516 aa14.79□□□□□ -0.04
CACNA1A-259ENST00000638114 RAD51DO75771 328 aa14.79□□□□□ -0.04
CACNA1A-259ENST00000638114 CD3EP07766 207 aa14.79□□□□□ -0.04
CACNA1A-259ENST00000638114 GPX2P18283 190 aa14.79□□□□□ -0.04
CACNA1A-259ENST00000638114 PRKAR1BP31321 381 aa14.79□□□□□ -0.04
CACNA1A-259ENST00000638114 RIPPLY3P57055 190 aa14.79□□□□□ -0.04
CACNA1A-259ENST00000638114 FAPQ12884 760 aa14.79□□□□□ -0.04
CACNA1A-259ENST00000638114 SCARB2Q14108 478 aa14.79□□□□□ -0.04
CACNA1A-259ENST00000638114 SLC17A1Q14916 467 aa14.79□□□□□ -0.04
CACNA1A-259ENST00000638114 PPA1Q15181 289 aa14.79□□□□□ -0.04
CACNA1A-259ENST00000638114 NCMAPQ5T1S8 102 aa14.79□□□□□ -0.04
CACNA1A-259ENST00000638114 C1orf140Q5VVS0 124 aa14.79□□□□□ -0.04
CACNA1A-259ENST00000638114 SHEQ5VZ18 495 aa14.79□□□□□ -0.04
CACNA1A-259ENST00000638114 DLEU7Q6UYE1 221 aa14.79□□□□□ -0.04
CACNA1A-259ENST00000638114 DHDDSQ86SQ9 333 aa14.79□□□□□ -0.04
CACNA1A-259ENST00000638114 ATG4DQ86TL0 474 aaPredicted RBP14.79□□□□□ -0.04
CACNA1A-259ENST00000638114 TMEM99Q8N816 258 aa14.79□□□□□ -0.04
CACNA1A-259ENST00000638114 AKAP1Q92667 903 aaKnown RBP eCLIP14.79□□□□□ -0.04
CACNA1A-259ENST00000638114 SLC35B4Q969S0 331 aa14.79□□□□□ -0.04
CACNA1A-259ENST00000638114 MUCL1Q96DR8 90 aa14.79□□□□□ -0.04
CACNA1A-259ENST00000638114 PERPQ96FX8 193 aa14.79□□□□□ -0.04
CACNA1A-259ENST00000638114 CPPED1Q9BRF8 314 aaPredicted RBP14.79□□□□□ -0.04
CACNA1A-259ENST00000638114 SPATA5L1Q9BVQ7 753 aa14.79□□□□□ -0.04
CACNA1A-259ENST00000638114 ZNF385DQ9H6B1 395 aa14.79□□□□□ -0.04
CACNA1A-259ENST00000638114 PARPBPQ9NWS1 579 aa14.79□□□□□ -0.04
CACNA1A-259ENST00000638114 ADPRHL2Q9NX46 363 aa14.79□□□□□ -0.04
CACNA1A-259ENST00000638114 RPS6KB2Q9UBS0 482 aa14.79□□□□□ -0.04
CACNA1A-259ENST00000638114 NDUFAF1Q9Y375 327 aa14.79□□□□□ -0.04
CACNA1A-259ENST00000638114 AQP7P3A6NL99 342 aa14.78□□□□□ -0.04
CACNA1A-259ENST00000638114 TMEM229AB2RXF0 380 aa14.78□□□□□ -0.04
CACNA1A-259ENST00000638114 SLC6A2P23975 617 aa14.78□□□□□ -0.04
CACNA1A-259ENST00000638114 AQP1P29972 269 aa14.78□□□□□ -0.04
CACNA1A-259ENST00000638114 Q5PR19 223 aa14.78□□□□□ -0.04
CACNA1A-259ENST00000638114 TIMM23BQ5SRD1 257 aa14.78□□□□□ -0.04
CACNA1A-259ENST00000638114 DHRS4L2Q6PKH6 230 aa14.78□□□□□ -0.04
CACNA1A-259ENST00000638114 KRTAP1-3Q8IUG1 177 aa14.78□□□□□ -0.04
CACNA1A-259ENST00000638114 LRRC75A-AS1Q8N1F1 130 aa14.78□□□□□ -0.04
CACNA1A-259ENST00000638114 OR52E4Q8NGH9 312 aa14.78□□□□□ -0.04
CACNA1A-259ENST00000638114 TMEM38AQ9H6F2 299 aa14.78□□□□□ -0.04
CACNA1A-259ENST00000638114 TAS2R16Q9NYV7 291 aa14.78□□□□□ -0.04
CACNA1A-259ENST00000638114 UPB1Q9UBR1 384 aa14.78□□□□□ -0.04
CACNA1A-259ENST00000638114 MALT1Q9UDY8 824 aa14.78□□□□□ -0.04
CACNA1A-259ENST00000638114 OR5H1A6NKK0 313 aa14.77□□□□□ -0.05
CACNA1A-259ENST00000638114 ELOA3DA6NLF2 546 aaPredicted RBP14.77□□□□□ -0.05
CACNA1A-259ENST00000638114 AHSA1O95433 338 aa14.77□□□□□ -0.05
CACNA1A-259ENST00000638114 BSPH1Q075Z2 132 aa14.77□□□□□ -0.05
CACNA1A-259ENST00000638114 ELOA3BQ3SY89 546 aa14.77□□□□□ -0.05
CACNA1A-259ENST00000638114 RUNDC3AQ59EK9 446 aa14.77□□□□□ -0.05
CACNA1A-259ENST00000638114 TMEM225Q6GV28 225 aa14.77□□□□□ -0.05
CACNA1A-259ENST00000638114 SEZ6L2Q6UXD5 910 aa14.77□□□□□ -0.05
CACNA1A-259ENST00000638114 GPAT4Q86UL3 456 aa14.77□□□□□ -0.05
CACNA1A-259ENST00000638114 P2RY8Q86VZ1 359 aa14.77□□□□□ -0.05
CACNA1A-259ENST00000638114 ZNF611Q8N823 705 aa14.77□□□□□ -0.05
CACNA1A-259ENST00000638114 HIPK4Q8NE63 616 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms