RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 ADAM19Q9H013 955 aa16.28■□□□□ 0.2
CLN6-214ENST00000636314 PRDM4Q9UKN5 801 aa16.28■□□□□ 0.2
CLN6-214ENST00000636314 CORO2BQ9UQ03 480 aa16.28■□□□□ 0.2
CLN6-214ENST00000636314 TRAPPC4Q9Y296 219 aa16.28■□□□□ 0.2
CLN6-214ENST00000636314 NOSIPQ9Y314 301 aaKnown RBP16.28■□□□□ 0.2
CLN6-214ENST00000636314 TLN2Q9Y4G6 2542 aa16.28■□□□□ 0.2
CLN6-214ENST00000636314 A0A0G2JND7 137 aa16.27■□□□□ 0.2
CLN6-214ENST00000636314 ZC3H12DA2A288 527 aaKnown RBP16.27■□□□□ 0.2
CLN6-214ENST00000636314 TRIM64A6NGJ6 449 aa16.27■□□□□ 0.2
CLN6-214ENST00000636314 TRIM64BA6NI03 449 aa16.27■□□□□ 0.2
CLN6-214ENST00000636314 ZNF716A6NP11 495 aa16.27■□□□□ 0.2
CLN6-214ENST00000636314 ZNF814B7Z6K7 855 aa16.27■□□□□ 0.2
CLN6-214ENST00000636314 INAFM1C9JVW0 142 aa16.27■□□□□ 0.2
CLN6-214ENST00000636314 GPR171O14626 319 aa16.27■□□□□ 0.2
CLN6-214ENST00000636314 PGM3O95394 542 aa16.27■□□□□ 0.2
CLN6-214ENST00000636314 ARAFP10398 606 aa16.27■□□□□ 0.2
CLN6-214ENST00000636314 FPR1P21462 350 aa16.27■□□□□ 0.2
CLN6-214ENST00000636314 LOXP28300 417 aaPredicted RBP16.27■□□□□ 0.2
CLN6-214ENST00000636314 ACAA2P42765 397 aaKnown RBP16.27■□□□□ 0.2
CLN6-214ENST00000636314 ITGADQ13349 1161 aa16.27■□□□□ 0.2
CLN6-214ENST00000636314 SERPINA11Q86U17 422 aa16.27■□□□□ 0.2
CLN6-214ENST00000636314 LSRQ86X29 649 aaPredicted RBP16.27■□□□□ 0.2
CLN6-214ENST00000636314 POTEKPQ9BYX7 375 aa16.27■□□□□ 0.2
CLN6-214ENST00000636314 LEF1Q9UJU2 399 aaPredicted RBP16.27■□□□□ 0.2
CLN6-214ENST00000636314 CHST2Q9Y4C5 530 aa16.27■□□□□ 0.2
CLN6-214ENST00000636314 RAI1Q7Z5J4 1906 aaPredicted RBP16.27■□□□□ 0.19
CLN6-214ENST00000636314 TRBV5-3A0A0A0MS03 114 aa16.26■□□□□ 0.19
CLN6-214ENST00000636314 EVPLLA8MZ36 301 aa16.26■□□□□ 0.19
CLN6-214ENST00000636314 KLF4O43474 513 aa16.26■□□□□ 0.19
CLN6-214ENST00000636314 EIF1BO60739 113 aaKnown RBP16.26■□□□□ 0.19
CLN6-214ENST00000636314 IMPDH2P12268 514 aa16.26■□□□□ 0.19
CLN6-214ENST00000636314 PRG2P13727 222 aa16.26■□□□□ 0.19
CLN6-214ENST00000636314 ETS2P15036 469 aa16.26■□□□□ 0.19
CLN6-214ENST00000636314 EDNRAP25101 427 aa16.26■□□□□ 0.19
CLN6-214ENST00000636314 IDUAP35475 653 aa16.26■□□□□ 0.19
CLN6-214ENST00000636314 CDK6Q00534 326 aa16.26■□□□□ 0.19
CLN6-214ENST00000636314 ACKR1Q16570 336 aa16.26■□□□□ 0.19
CLN6-214ENST00000636314 PRSS57Q6UWY2 283 aa16.26■□□□□ 0.19
CLN6-214ENST00000636314 BHLHA15Q7RTS1 189 aaPredicted RBP16.26■□□□□ 0.19
CLN6-214ENST00000636314 KRT73Q86Y46 540 aa16.26■□□□□ 0.19
CLN6-214ENST00000636314 CCDC103Q8IW40 242 aa16.26■□□□□ 0.19
CLN6-214ENST00000636314 C10orf111Q8N326 155 aa16.26■□□□□ 0.19
CLN6-214ENST00000636314 APH1AQ96BI3 265 aa16.26■□□□□ 0.19
CLN6-214ENST00000636314 PLPPR2Q96GM1 343 aa16.26■□□□□ 0.19
CLN6-214ENST00000636314 USB1Q9BQ65 265 aaKnown RBP16.26■□□□□ 0.19
CLN6-214ENST00000636314 NAA11Q9BSU3 229 aaPredicted RBP16.26■□□□□ 0.19
CLN6-214ENST00000636314 GMEB1Q9Y692 573 aa16.26■□□□□ 0.19
CLN6-214ENST00000636314 HIVEP2P31629 2446 aa16.26■□□□□ 0.19
CLN6-214ENST00000636314 ANGPT2O15123 496 aa16.25■□□□□ 0.19
CLN6-214ENST00000636314 FRS3O43559 492 aa16.25■□□□□ 0.19
CLN6-214ENST00000636314 RAMP1O60894 148 aa16.25■□□□□ 0.19
CLN6-214ENST00000636314 LYZL6O75951 148 aa16.25■□□□□ 0.19
CLN6-214ENST00000636314 CNOT4O95628 575 aaKnown RBP16.25■□□□□ 0.19
CLN6-214ENST00000636314 GPIP06744 558 aa16.25■□□□□ 0.19
CLN6-214ENST00000636314 SLC16A1P53985 500 aa16.25■□□□□ 0.19
CLN6-214ENST00000636314 REEP3Q6NUK4 255 aa16.25■□□□□ 0.19
CLN6-214ENST00000636314 ZNF704Q6ZNC4 412 aaPredicted RBP16.25■□□□□ 0.19
CLN6-214ENST00000636314 C20orf204Q6ZNR8 217 aa16.25■□□□□ 0.19
CLN6-214ENST00000636314 DHDDSQ86SQ9 333 aa16.25■□□□□ 0.19
CLN6-214ENST00000636314 UBE2J2Q8N2K1 259 aa16.25■□□□□ 0.19
CLN6-214ENST00000636314 SLC35B4Q969S0 331 aa16.25■□□□□ 0.19
CLN6-214ENST00000636314 CPPED1Q9BRF8 314 aaPredicted RBP16.25■□□□□ 0.19
CLN6-214ENST00000636314 SPATA5L1Q9BVQ7 753 aa16.25■□□□□ 0.19
CLN6-214ENST00000636314 IKZF5Q9H5V7 419 aa16.25■□□□□ 0.19
CLN6-214ENST00000636314 ZNF385DQ9H6B1 395 aa16.25■□□□□ 0.19
CLN6-214ENST00000636314 NGBQ9NPG2 151 aa16.25■□□□□ 0.19
CLN6-214ENST00000636314 NDUFAF1Q9Y375 327 aa16.25■□□□□ 0.19
CLN6-214ENST00000636314 CSPG4Q6UVK1 2322 aa16.25■□□□□ 0.19
CLN6-214ENST00000636314 A8MVM7 634 aa16.24■□□□□ 0.19
CLN6-214ENST00000636314 IGHV3-9P01782 118 aa16.24■□□□□ 0.19
CLN6-214ENST00000636314 GPX2P18283 190 aa16.24■□□□□ 0.19
CLN6-214ENST00000636314 COX5AP20674 150 aa16.24■□□□□ 0.19
CLN6-214ENST00000636314 PRKAR1BP31321 381 aa16.24■□□□□ 0.19
CLN6-214ENST00000636314 H3F3AP84243 136 aa16.24■□□□□ 0.19
CLN6-214ENST00000636314 BNIP2Q12982 314 aa16.24■□□□□ 0.19
CLN6-214ENST00000636314 CEACAM7Q14002 265 aa16.24■□□□□ 0.19
CLN6-214ENST00000636314 SCARB2Q14108 478 aa16.24■□□□□ 0.19
CLN6-214ENST00000636314 CAPRIN1Q14444 709 aaKnown RBP16.24■□□□□ 0.19
CLN6-214ENST00000636314 OR7A5Q15622 319 aa16.24■□□□□ 0.19
CLN6-214ENST00000636314 TAB1Q15750 504 aa16.24■□□□□ 0.19
CLN6-214ENST00000636314 STK11Q15831 433 aa16.24■□□□□ 0.19
CLN6-214ENST00000636314 OTUD3Q5T2D3 398 aaPredicted RBP16.24■□□□□ 0.19
CLN6-214ENST00000636314 PAQR6Q6TCH4 344 aa16.24■□□□□ 0.19
CLN6-214ENST00000636314 CASP12Q6UXS9 341 aa16.24■□□□□ 0.19
CLN6-214ENST00000636314 CXXC5Q7LFL8 322 aaKnown RBP16.24■□□□□ 0.19
CLN6-214ENST00000636314 HSD17B8Q92506 261 aa16.24■□□□□ 0.19
CLN6-214ENST00000636314 C3orf49Q96BT1 292 aa16.24■□□□□ 0.19
CLN6-214ENST00000636314 TAPBPLQ9BX59 468 aa16.24■□□□□ 0.19
CLN6-214ENST00000636314 TMEM38AQ9H6F2 299 aa16.24■□□□□ 0.19
CLN6-214ENST00000636314 SLC9A8Q9Y2E8 581 aa16.24■□□□□ 0.19
CLN6-214ENST00000636314 PRR14LQ5THK1 2151 aa16.23■□□□□ 0.19
CLN6-214ENST00000636314 CHD3Q12873 2000 aaKnown RBP16.23■□□□□ 0.19
CLN6-214ENST00000636314 LIPT2A6NK58 231 aa16.23■□□□□ 0.19
CLN6-214ENST00000636314 MRPL33O75394 65 aaKnown RBP16.23■□□□□ 0.19
CLN6-214ENST00000636314 TROVE2P10155 538 aaKnown RBP eCLIP16.23■□□□□ 0.19
CLN6-214ENST00000636314 IGHV1-2P23083 117 aa16.23■□□□□ 0.19
CLN6-214ENST00000636314 SLC6A2P23975 617 aa16.23■□□□□ 0.19
CLN6-214ENST00000636314 HOXC5Q00444 222 aa16.23■□□□□ 0.19
CLN6-214ENST00000636314 FBXW9Q5XUX1 488 aa16.23■□□□□ 0.19
CLN6-214ENST00000636314 DLEU7Q6UYE1 221 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms