RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 FAM71E2Q8N5Q1 922 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 IMP4Q96G21 291 aaKnown RBP5.2□□□□□ -1.58
SCN1A-209ENST00000635750 ARV1Q9H2C2 271 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 SAV1Q9H4B6 383 aaPredicted RBP5.2□□□□□ -1.58
SCN1A-209ENST00000635750 IFT172Q9UG01 1749 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 AQP9O43315 295 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 GRPP07492 148 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 OSMP13725 252 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 RAP2BP61225 183 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 SQSTM1Q13501 440 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 SYT6Q5T7P8 510 aaPredicted RBP5.19□□□□□ -1.58
SCN1A-209ENST00000635750 KDM4DQ6B0I6 523 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 PTCRAQ6ISU1 281 aaPredicted RBP5.19□□□□□ -1.58
SCN1A-209ENST00000635750 ILDR1Q86SU0 546 aaPredicted RBP5.19□□□□□ -1.58
SCN1A-209ENST00000635750 COMMD7Q86VX2 200 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 CPXM2Q8N436 756 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 LRRN4CLQ8ND94 238 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 ADAMTS16Q8TE57 1224 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 PAQR8Q8TEZ7 354 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 HPSE2Q8WWQ2 592 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 EMG1Q92979 244 aaKnown RBP5.19□□□□□ -1.58
SCN1A-209ENST00000635750 HHIPL1Q96JK4 782 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 P2RY12Q9H244 342 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 HEYLQ9NQ87 328 aaPredicted RBP5.19□□□□□ -1.58
SCN1A-209ENST00000635750 RIMS3Q9UJD0 308 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 GABRQQ9UN88 632 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 KCTD3Q9Y597 815 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 PCM1Q15154 2024 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 LDB3O75112 727 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 GGT1P19440 569 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 MAOBP27338 520 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 PBX1P40424 430 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 ERHP84090 104 aaKnown RBP5.19□□□□□ -1.58
SCN1A-209ENST00000635750 TMEM176BQ3YBM2 270 aaPredicted RBP5.19□□□□□ -1.58
SCN1A-209ENST00000635750 OR5M10Q6IEU7 315 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 CAMKMTQ7Z624 323 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 PDZD3Q86UT5 571 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 CNIH3Q8TBE1 160 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 MRPL38Q96DV4 380 aaKnown RBP5.19□□□□□ -1.58
SCN1A-209ENST00000635750 ZMYND19Q96E35 227 aaPredicted RBP5.19□□□□□ -1.58
SCN1A-209ENST00000635750 CDCP1Q9H5V8 836 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 C12orf49Q9H741 205 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 CPNE5Q9HCH3 593 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 TAAR2Q9P1P5 351 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 DNMT3BQ9UBC3 853 aaKnown RBP5.19□□□□□ -1.58
SCN1A-209ENST00000635750 COPS3Q9UNS2 423 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 GPR52Q9Y2T5 361 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 A0A0A6YYC8 382 aaPredicted RBP5.19□□□□□ -1.58
SCN1A-209ENST00000635750 TMEM269A0A1B0GVZ9 245 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 I3L1I5 382 aaPredicted RBP5.19□□□□□ -1.58
SCN1A-209ENST00000635750 ARPC5O15511 151 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 C7P10643 843 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 DTYMKP23919 212 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 PXNP49023 591 aaPredicted RBP5.19□□□□□ -1.58
SCN1A-209ENST00000635750 PSMB3P49720 205 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 ZP2Q05996 745 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 ZNF626Q68DY1 528 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 ANKRD54Q6NXT1 300 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 PGAP1Q75T13 922 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 H2BFWTQ7Z2G1 175 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 TMEM25Q86YD3 366 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 SERPINA12Q8IW75 414 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 OR10AD1Q8NGE0 317 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 SECTM1Q8WVN6 248 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 C3orf49Q96BT1 292 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 CHST11Q9NPF2 352 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 FAM212BQ9NTI7 297 aaPredicted RBP5.19□□□□□ -1.58
SCN1A-209ENST00000635750 ACOXLQ9NUZ1 547 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 AK6Q9Y3D8 172 aaKnown RBP5.19□□□□□ -1.58
SCN1A-209ENST00000635750 ARHGEF28Q8N1W1 1705 aaKnown RBP5.19□□□□□ -1.58
SCN1A-209ENST00000635750 COL14A1Q05707 1796 aaKnown RBP5.19□□□□□ -1.58
SCN1A-209ENST00000635750 CHD2O14647 1828 aaKnown RBP5.19□□□□□ -1.58
SCN1A-209ENST00000635750 RNASEK-C17orf49H0YIS7 233 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 RNF225M0QZC1 329 aaPredicted RBP5.19□□□□□ -1.58
SCN1A-209ENST00000635750 AQP7O14520 342 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 RAD1O60671 282 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 TRHRP34981 398 aaPredicted RBP5.19□□□□□ -1.58
SCN1A-209ENST00000635750 RGRP47804 291 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 UBE2IP63279 158 aaKnown RBP5.19□□□□□ -1.58
SCN1A-209ENST00000635750 POU3F1Q03052 451 aaPredicted RBP5.19□□□□□ -1.58
SCN1A-209ENST00000635750 EDDM3AQ14507 147 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 CDCA2Q69YH5 1023 aaPredicted RBP5.19□□□□□ -1.58
SCN1A-209ENST00000635750 COMMD6Q7Z4G1 85 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 CPNE8Q86YQ8 564 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 ZBTB8AQ96BR9 441 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 THSD1Q9NS62 852 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 MTCH1Q9NZJ7 389 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 V9GY05 133 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 A0A1B0GTW7 788 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 SLC22A23A1A5C7 686 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 RAB19A4D1S5 217 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 AGPAT2O15120 278 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 TCAPO15273 167 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 SNAPINO95295 136 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 IL2RAP01589 272 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 CLDN2P57739 230 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 YPEL5P62699 121 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 TMEM236Q5W0B7 351 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 TCTE3Q8IZS6 198 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 FAM58AQ8N1B3 248 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms