RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 CSNK1A1LQ8N752 337 aa0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 ZBTB44Q8NCP5 570 aa0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 DEFB124Q8NES8 71 aa0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 OR13F1Q8NGS4 319 aa0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 WDR36Q8NI36 951 aaKnown RBP0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 URGCPQ8TCY9 931 aa0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 SETD7Q8WTS6 366 aaKnown RBP0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 DCUN1D4Q92564 292 aa0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 FGF14Q92915 247 aa0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 ART4Q93070 314 aa0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 PTP4A1Q93096 173 aa0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 PSMG2Q969U7 264 aa0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 MRPL38Q96DV4 380 aaKnown RBP0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 NUS1Q96E22 293 aa0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 TCEAL4Q96EI5 215 aa0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 DTD2Q96FN9 168 aa0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 SDSLQ96GA7 329 aa0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 CPB2Q96IY4 423 aa0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 MS4A14Q96JA4 679 aa0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 CABS1Q96KC9 395 aa0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 NSMCE2Q96MF7 247 aa0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 RUFY1Q96T51 708 aa0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 KIR2DL4Q99706 377 aa0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 CBWD1Q9BRT8 395 aa0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 NICN1Q9BSH3 213 aa0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 EDEM2Q9BV94 578 aa0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 PLA2G2FQ9BZM2 168 aa0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 API5Q9BZZ5 524 aaKnown RBP0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 TSPYL1Q9H0U9 437 aa0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 NXF3Q9H4D5 531 aaKnown RBP0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 FAM124BQ9H5Z6 455 aaPredicted RBP0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 TMEM231Q9H6L2 316 aa0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 NARFLQ9H6Q4 476 aa0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 CWH43Q9H720 699 aa0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 SYTL2Q9HCH5 934 aa0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 MID1IP1Q9NPA3 183 aa0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 EXOSC3Q9NQT5 275 aaKnown RBP0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 NANSQ9NR45 359 aa0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 HEBP1Q9NRV9 189 aa0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 PNPLA3Q9NST1 481 aa0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 C1orf123Q9NWV4 160 aa0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 ANAPC11Q9NYG5 84 aa0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 WRAP73Q9P2S5 460 aaPredicted RBP0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 FETUBQ9UGM5 382 aa0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 APOBEC3BQ9UH17 382 aaKnown RBP0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 TRMT6Q9UJA5 497 aaKnown RBP0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 MOSPD1Q9UJG1 213 aa0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 NAP1L2Q9ULW6 460 aaPredicted RBP0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 PDE10AQ9Y233 779 aa0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 PIN4Q9Y237 131 aaKnown RBP0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 KLHDC2Q9Y2U9 406 aa0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 EXOSC1Q9Y3B2 195 aaKnown RBP0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 KIF25-AS1Q9Y6Z4 181 aa0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 PRR14LQ5THK1 2151 aa0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 CLUHO75153 1309 aa0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 FRMPD4Q14CM0 1322 aa0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 NRCAMQ92823 1304 aa0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 ARID1AO14497 2285 aa0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 ABCA4P78363 2273 aa0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 AHCTF1Q8WYP5 2266 aa0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 NBASA2RRP1 2371 aa0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 SPTBN1Q01082 2364 aaKnown RBP0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 NAV3Q8IVL0 2385 aa0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 SPTA1P02549 2419 aa0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 WDFY3Q8IZQ1 3526 aa0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 CEP295Q9C0D2 2601 aa0.78□□□□□ -2.29
SMARCB1-209ENST00000635578 CHD6Q8TD26 2715 aa0.78□□□□□ -2.29
SMARCB1-209ENST00000635578 SPEGQ15772 3267 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 FREM1Q5H8C1 2179 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 MALRD1Q5VYJ5 2156 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 SPENQ96T58 3664 aaKnown RBP0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 URB1O60287 2271 aaKnown RBP0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 SPTAN1Q13813 2472 aaKnown RBP0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 UTP20O75691 2785 aaKnown RBP0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 TRBV2A0A0J9YWF9 115 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 A0A0U1RRA0 63 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 GSTTP1A0A1W2PQM5 241 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 CFAP73A6NFT4 308 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 SAGE2PA6NJ88 616 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 FAM74A7A6NL05 159 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 PP2D1A8MPX8 630 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 RSPH10B2B2RC85 870 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 CDX4O14627 284 aaPredicted RBP0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 ARPC1BO15143 372 aaKnown RBP0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 RNF113AO15541 343 aaKnown RBP0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 BUB1O43683 1085 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 NUDT21O43809 227 aaKnown RBP0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 SLC37A4O43826 429 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 ZBTB14O43829 449 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 VEGFDO43915 354 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 LRP3O75074 770 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 SERF1AO75920 110 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 STK17BO94768 372 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 KLF8O95600 359 aaPredicted RBP0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 CXCL14O95715 111 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 SLC25A27O95847 323 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 MT-ATP6P00846 226 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 HSPB1P04792 205 aaKnown RBP0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 RSPH10BP0C881 870 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 ELK1P19419 428 aa0.77□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms