RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 HS3ST2Q9Y278 367 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 ATG4BQ9Y4P1 393 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 COL4A4P53420 1690 aaPredicted RBP6.44□□□□□ -1.38
NEDD9-216ENST00000620854 OR6C74A6NCV1 312 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 SCGNO76038 276 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 LPLP06858 475 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 DHPSP49366 369 aaPredicted RBP6.44□□□□□ -1.38
NEDD9-216ENST00000620854 FXYD6P3P58550 94 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 FUT5Q11128 374 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 FZD5Q13467 585 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 Q6ZNB5 142 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 STX12Q86Y82 276 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 ZNF101Q8IZC7 436 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 SAMD14Q8IZD0 417 aaPredicted RBP6.44□□□□□ -1.38
NEDD9-216ENST00000620854 SDR16C5Q8N3Y7 309 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 SLC16A11Q8NCK7 471 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 TTLQ8NG68 377 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 OR2L3Q8NG85 312 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 PHOSPHO1Q8TCT1 267 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 ASB12Q8WXK4 309 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 ADAMTS14Q8WXS8 1223 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 ZMYND19Q96E35 227 aaPredicted RBP6.44□□□□□ -1.38
NEDD9-216ENST00000620854 HSPA12BQ96MM6 686 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 OR14A2Q96R54 314 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 MNTQ99583 582 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 SLC38A3Q99624 504 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 CPEB1Q9BZB8 566 aaKnown RBP6.44□□□□□ -1.38
NEDD9-216ENST00000620854 TMEM168Q9H0V1 697 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 C20orf85Q9H1P6 137 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 OR52D1Q9H346 318 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 FKRPQ9H9S5 495 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 C12orf10Q9HB07 376 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 PNO1Q9NRX1 252 aaKnown RBP6.44□□□□□ -1.38
NEDD9-216ENST00000620854 SLC23A2Q9UGH3 650 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 ACAD8Q9UKU7 415 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 PLEKHA6Q9Y2H5 1048 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 CDHR4A6H8M9 788 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 RHPN2P1A8MT19 583 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 LRRN3E7EW58 273 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 RNGTTO60942 597 aaKnown RBP6.44□□□□□ -1.38
NEDD9-216ENST00000620854 ATP5A1P25705 553 aaKnown RBP6.44□□□□□ -1.38
NEDD9-216ENST00000620854 ITGB8P26012 769 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 HSD17B2P37059 387 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 MMP12P39900 470 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 RPL35P42766 123 aaKnown RBP6.44□□□□□ -1.38
NEDD9-216ENST00000620854 OR3A2P47893 321 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 CHAF1BQ13112 559 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 HTR4Q13639 388 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 ATRAIDQ6UW56 229 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 KCTD9Q7L273 389 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 SSX6Q7RTT6 188 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 ZNF547Q8IVP9 402 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 NUP43Q8NFH3 380 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 OR56A1Q8NGH5 318 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 LGALS14Q8TCE9 139 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 KLHL15Q96M94 604 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 SGPP1Q9BX95 441 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 LRRN3Q9H3W5 708 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 SEC61A2Q9H9S3 476 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 IL21Q9HBE4 155 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 SRA1Q9HD15 236 aaKnown RBP6.44□□□□□ -1.38
NEDD9-216ENST00000620854 SCP2D1Q9UJQ7 156 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 A0A0G2JPF8 293 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 CENPVL1A0A0U1RR11 272 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 C7orf66A4D0T2 115 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 ACOD1A6NK06 481 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 KDM4EB2RXH2 506 aaPredicted RBP6.44□□□□□ -1.38
NEDD9-216ENST00000620854 HNRNPCL3B7ZW38 293 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 PDCD5O14737 125 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 PPM1BO75688 479 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 TNFP01375 233 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 HNRNPCL4P0DMR1 293 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 NAGAP17050 411 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 CXCL2P19875 107 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 IL32P24001 234 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 RBMS1P29558 406 aaKnown RBP6.44□□□□□ -1.38
NEDD9-216ENST00000620854 HTR1FP30939 366 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 THBS2P35442 1172 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 MTNR1BP49286 362 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 PLXNA3P51805 1871 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 PDX1P52945 283 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 PCBP4P57723 403 aaKnown RBP6.44□□□□□ -1.38
NEDD9-216ENST00000620854 TAS2R38P59533 333 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 GAS6Q14393 721 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 RNLSQ5VYX0 342 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 ULK3Q6PHR2 472 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 ZNF793Q6ZN11 406 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 GDF7Q7Z4P5 450 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 GPALPP1Q8IXQ4 340 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 SLC44A3Q8N4M1 653 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 OR52I2Q8NH67 350 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 LHFPL5Q8TAF8 219 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 FANK1Q8TC84 345 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 ACOT12Q8WYK0 555 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 HLA-CQ95604 372 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 CNRIP1Q96F85 164 aaPredicted RBP6.44□□□□□ -1.38
NEDD9-216ENST00000620854 KLHDC7BQ96G42 594 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 TOE1Q96GM8 510 aaKnown RBP6.44□□□□□ -1.38
NEDD9-216ENST00000620854 SLC41A3Q96GZ6 507 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 ASB16Q96NS5 453 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms