RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 C7orf57Q8NEG2 295 aa19.64■□□□□ 0.73
SGMS1-210ENST00000619438 OR52R1Q8NGF1 315 aa19.64■□□□□ 0.73
SGMS1-210ENST00000619438 MCFD2Q8NI22 146 aa19.64■□□□□ 0.73
SGMS1-210ENST00000619438 ELP5Q8TE02 316 aa19.64■□□□□ 0.73
SGMS1-210ENST00000619438 DEFB126Q9BYW3 111 aa19.64■□□□□ 0.73
SGMS1-210ENST00000619438 HHATLQ9HCP6 504 aa19.64■□□□□ 0.73
SGMS1-210ENST00000619438 ETAA1Q9NY74 926 aa19.64■□□□□ 0.73
SGMS1-210ENST00000619438 SLC7A7Q9UM01 511 aa19.64■□□□□ 0.73
SGMS1-210ENST00000619438 CDH10Q9Y6N8 788 aa19.64■□□□□ 0.73
SGMS1-210ENST00000619438 TGFBR3LH3BV60 316 aa19.63■□□□□ 0.73
SGMS1-210ENST00000619438 TGFBR1P36897 503 aa19.63■□□□□ 0.73
SGMS1-210ENST00000619438 MLLT11Q13015 90 aaPredicted RBP19.63■□□□□ 0.73
SGMS1-210ENST00000619438 C1DQ13901 141 aaKnown RBP19.63■□□□□ 0.73
SGMS1-210ENST00000619438 ELAVL1Q15717 326 aaKnown RBP19.63■□□□□ 0.73
SGMS1-210ENST00000619438 ZSWIM7Q19AV6 140 aa19.63■□□□□ 0.73
SGMS1-210ENST00000619438 BCDIN3DQ7Z5W3 292 aaKnown RBP19.63■□□□□ 0.73
SGMS1-210ENST00000619438 GRAMD2AQ8IUY3 354 aa19.63■□□□□ 0.73
SGMS1-210ENST00000619438 GALNT12Q8IXK2 581 aa19.63■□□□□ 0.73
SGMS1-210ENST00000619438 B4GALNT2Q8NHY0 566 aa19.63■□□□□ 0.73
SGMS1-210ENST00000619438 TMEM255BQ8WV15 326 aa19.63■□□□□ 0.73
SGMS1-210ENST00000619438 DAZLQ92904 295 aaKnown RBP19.63■□□□□ 0.73
SGMS1-210ENST00000619438 SLC35B4Q969S0 331 aa19.63■□□□□ 0.73
SGMS1-210ENST00000619438 PPP1R14BQ96C90 147 aa19.63■□□□□ 0.73
SGMS1-210ENST00000619438 CDCP1Q9H5V8 836 aa19.63■□□□□ 0.73
SGMS1-210ENST00000619438 SIAEQ9HAT2 523 aa19.63■□□□□ 0.73
SGMS1-210ENST00000619438 FAIMQ9NVQ4 179 aa19.63■□□□□ 0.73
SGMS1-210ENST00000619438 FBXO34Q9NWN3 711 aa19.63■□□□□ 0.73
SGMS1-210ENST00000619438 CLEC2DQ9UHP7 191 aa19.63■□□□□ 0.73
SGMS1-210ENST00000619438 ZNF223Q9UK11 482 aaPredicted RBP19.63■□□□□ 0.73
SGMS1-210ENST00000619438 KCNK2O95069 426 aa19.62■□□□□ 0.73
SGMS1-210ENST00000619438 BMP4P12644 408 aa19.62■□□□□ 0.73
SGMS1-210ENST00000619438 DRD5P21918 477 aa19.62■□□□□ 0.73
SGMS1-210ENST00000619438 HTR2AP28223 471 aa19.62■□□□□ 0.73
SGMS1-210ENST00000619438 FOXK1P85037 733 aa19.62■□□□□ 0.73
SGMS1-210ENST00000619438 ZNF155Q12901 538 aaPredicted RBP19.62■□□□□ 0.73
SGMS1-210ENST00000619438 TUBA3EQ6PEY2 450 aa19.62■□□□□ 0.73
SGMS1-210ENST00000619438 DGAT2L6Q6ZPD8 337 aa19.62■□□□□ 0.73
SGMS1-210ENST00000619438 RPS19BP1Q86WX3 136 aaKnown RBP19.62■□□□□ 0.73
SGMS1-210ENST00000619438 NFAM1Q8NET5 270 aaPredicted RBP19.62■□□□□ 0.73
SGMS1-210ENST00000619438 RBM18Q96H35 190 aaKnown RBP19.62■□□□□ 0.73
SGMS1-210ENST00000619438 CENPOQ9BU64 300 aa19.62■□□□□ 0.73
SGMS1-210ENST00000619438 CLDN16Q9Y5I7 305 aa19.62■□□□□ 0.73
SGMS1-210ENST00000619438 GXYLT2A0PJZ3 443 aa19.62■□□□□ 0.73
SGMS1-210ENST00000619438 HMGN1P05114 100 aa19.62■□□□□ 0.73
SGMS1-210ENST00000619438 TNFSF10P50591 281 aa19.62■□□□□ 0.73
SGMS1-210ENST00000619438 DOC2BQ14184 412 aa19.62■□□□□ 0.73
SGMS1-210ENST00000619438 OR1Q1Q15612 314 aa19.62■□□□□ 0.73
SGMS1-210ENST00000619438 ZNHIT3Q15649 155 aaPredicted RBP19.62■□□□□ 0.73
SGMS1-210ENST00000619438 ZNF613Q6PF04 617 aa19.62■□□□□ 0.73
SGMS1-210ENST00000619438 BEST3Q8N1M1 668 aa19.62■□□□□ 0.73
SGMS1-210ENST00000619438 ANKK1Q8NFD2 765 aa19.62■□□□□ 0.73
SGMS1-210ENST00000619438 DOK4Q8TEW6 326 aa19.62■□□□□ 0.73
SGMS1-210ENST00000619438 RFKQ969G6 155 aa19.62■□□□□ 0.73
SGMS1-210ENST00000619438 SNRNP40Q96DI7 357 aaKnown RBP19.62■□□□□ 0.73
SGMS1-210ENST00000619438 COX4I2Q96KJ9 171 aa19.62■□□□□ 0.73
SGMS1-210ENST00000619438 ZNF559Q9BR84 538 aa19.62■□□□□ 0.73
SGMS1-210ENST00000619438 CHCHD6Q9BRQ6 235 aa19.62■□□□□ 0.73
SGMS1-210ENST00000619438 FOLH1BQ9HBA9 442 aa19.62■□□□□ 0.73
SGMS1-210ENST00000619438 ISYNA1Q9NPH2 558 aa19.62■□□□□ 0.73
SGMS1-210ENST00000619438 SEC14L4Q9UDX3 406 aa19.62■□□□□ 0.73
SGMS1-210ENST00000619438 COL12A1Q99715 3063 aa19.61■□□□□ 0.73
SGMS1-210ENST00000619438 TRAV17A0A0B4J275 112 aa19.61■□□□□ 0.73
SGMS1-210ENST00000619438 LOC100506127A0A0U1RQW1 187 aa19.61■□□□□ 0.73
SGMS1-210ENST00000619438 TMEM129A0AVI4 362 aa19.61■□□□□ 0.73
SGMS1-210ENST00000619438 OR5H15A6NDH6 313 aa19.61■□□□□ 0.73
SGMS1-210ENST00000619438 TTC36A6NLP5 189 aa19.61■□□□□ 0.73
SGMS1-210ENST00000619438 SURF4O15260 269 aa19.61■□□□□ 0.73
SGMS1-210ENST00000619438 PRG2P13727 222 aa19.61■□□□□ 0.73
SGMS1-210ENST00000619438 GALNSP34059 522 aa19.61■□□□□ 0.73
SGMS1-210ENST00000619438 EMDP50402 254 aa19.61■□□□□ 0.73
SGMS1-210ENST00000619438 PSG6Q00889 435 aa19.61■□□□□ 0.73
SGMS1-210ENST00000619438 BIKQ13323 160 aa19.61■□□□□ 0.73
SGMS1-210ENST00000619438 TMED1Q13445 227 aa19.61■□□□□ 0.73
SGMS1-210ENST00000619438 INAQ16352 499 aa19.61■□□□□ 0.73
SGMS1-210ENST00000619438 RGS21Q2M5E4 152 aa19.61■□□□□ 0.73
SGMS1-210ENST00000619438 PGGHGQ32M88 737 aa19.61■□□□□ 0.73
SGMS1-210ENST00000619438 PRR30Q53SZ7 412 aaPredicted RBP19.61■□□□□ 0.73
SGMS1-210ENST00000619438 FIGNL1Q6PIW4 674 aa19.61■□□□□ 0.73
SGMS1-210ENST00000619438 DCDC5Q6ZRR9 648 aa19.61■□□□□ 0.73
SGMS1-210ENST00000619438 MEX3DQ86XN8 651 aaKnown RBP19.61■□□□□ 0.73
SGMS1-210ENST00000619438 OR4Q3Q8NH05 313 aa19.61■□□□□ 0.73
SGMS1-210ENST00000619438 THAP3Q8WTV1 239 aaPredicted RBP19.61■□□□□ 0.73
SGMS1-210ENST00000619438 RIT1Q92963 219 aa19.61■□□□□ 0.73
SGMS1-210ENST00000619438 MIB2Q96AX9 1013 aa19.61■□□□□ 0.73
SGMS1-210ENST00000619438 VSTM2LQ96N03 204 aa19.61■□□□□ 0.73
SGMS1-210ENST00000619438 DGAT2Q96PD7 388 aa19.61■□□□□ 0.73
SGMS1-210ENST00000619438 UTP23Q9BRU9 249 aaKnown RBP19.61■□□□□ 0.73
SGMS1-210ENST00000619438 CDADC1Q9BWV3 514 aa19.61■□□□□ 0.73
SGMS1-210ENST00000619438 RNF32Q9H0A6 362 aa19.61■□□□□ 0.73
SGMS1-210ENST00000619438 NDUFB11Q9NX14 153 aa19.61■□□□□ 0.73
SGMS1-210ENST00000619438 GALNT8Q9NY28 637 aa19.61■□□□□ 0.73
SGMS1-210ENST00000619438 TRBV11-1A0A0K0K1C0 115 aa19.6■□□□□ 0.73
SGMS1-210ENST00000619438 C17orf105B2RV13 164 aa19.6■□□□□ 0.73
SGMS1-210ENST00000619438 MYL12BO14950 172 aa19.6■□□□□ 0.73
SGMS1-210ENST00000619438 DYRK3O43781 588 aa19.6■□□□□ 0.73
SGMS1-210ENST00000619438 NTN1O95631 604 aa19.6■□□□□ 0.73
SGMS1-210ENST00000619438 GPR4P46093 362 aa19.6■□□□□ 0.73
SGMS1-210ENST00000619438 MTNR1AP48039 350 aa19.6■□□□□ 0.73
SGMS1-210ENST00000619438 OC90Q02509 493 aaPredicted RBP19.6■□□□□ 0.73
SGMS1-210ENST00000619438 PRKCDQ05655 676 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms