RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 MTX2O75431 263 aa14.1□□□□□ -0.15
COL5A1-208ENST00000618395 GABARAPO95166 117 aa14.1□□□□□ -0.15
COL5A1-208ENST00000618395 FPGSQ05932 587 aa14.1□□□□□ -0.15
COL5A1-208ENST00000618395 STEAP1BQ6NZ63 245 aa14.1□□□□□ -0.15
COL5A1-208ENST00000618395 RPL3LQ92901 407 aaKnown RBP14.1□□□□□ -0.15
COL5A1-208ENST00000618395 GSX1Q9H4S2 264 aaPredicted RBP14.1□□□□□ -0.15
COL5A1-208ENST00000618395 METTL7AQ9H8H3 244 aa14.1□□□□□ -0.15
COL5A1-208ENST00000618395 IL17BQ9UHF5 180 aa14.1□□□□□ -0.15
COL5A1-208ENST00000618395 HES2Q9Y543 173 aa14.1□□□□□ -0.15
COL5A1-208ENST00000618395 CLLU1Q5K131 121 aa14.1□□□□□ -0.15
COL5A1-208ENST00000618395 UTP4Q969X6 686 aaKnown RBP14.1□□□□□ -0.15
COL5A1-208ENST00000618395 LDAHQ9H6V9 325 aa14.1□□□□□ -0.15
COL5A1-208ENST00000618395 TPOP07202 933 aa14.1□□□□□ -0.15
COL5A1-208ENST00000618395 NCBP2-AS2Q69YL0 99 aa14.1□□□□□ -0.15
COL5A1-208ENST00000618395 SFXN4Q6P4A7 337 aa14.1□□□□□ -0.15
COL5A1-208ENST00000618395 CREB3L4Q8TEY5 395 aa14.1□□□□□ -0.15
COL5A1-208ENST00000618395 MS4A10Q96PG2 267 aa14.1□□□□□ -0.15
COL5A1-208ENST00000618395 INPP5KQ9BT40 448 aa14.1□□□□□ -0.15
COL5A1-208ENST00000618395 TRAV34A0A0B4J273 112 aa14.09□□□□□ -0.15
COL5A1-208ENST00000618395 INHBCP55103 352 aa14.09□□□□□ -0.15
COL5A1-208ENST00000618395 SAMD7Q7Z3H4 446 aa14.09□□□□□ -0.15
COL5A1-208ENST00000618395 SLC39A11Q8N1S5 342 aa14.09□□□□□ -0.15
COL5A1-208ENST00000618395 OR4F5Q8NH21 305 aa14.09□□□□□ -0.15
COL5A1-208ENST00000618395 TMEM125Q96AQ2 219 aa14.09□□□□□ -0.15
COL5A1-208ENST00000618395 OR4F4Q96R69 305 aa14.09□□□□□ -0.15
COL5A1-208ENST00000618395 UBTD1Q9HAC8 227 aa14.09□□□□□ -0.15
COL5A1-208ENST00000618395 OLAHQ9NV23 265 aa14.09□□□□□ -0.15
COL5A1-208ENST00000618395 CAMK2AQ9UQM7 478 aa14.09□□□□□ -0.15
COL5A1-208ENST00000618395 PCDHA9Q9Y5H5 950 aa14.09□□□□□ -0.15
COL5A1-208ENST00000618395 PTGDR2Q9Y5Y4 395 aa14.09□□□□□ -0.15
COL5A1-208ENST00000618395 PSAT1Q9Y617 370 aa14.09□□□□□ -0.15
COL5A1-208ENST00000618395 CSNK1G3Q9Y6M4 447 aa14.09□□□□□ -0.15
COL5A1-208ENST00000618395 DEPDC5O75140 1603 aa14.09□□□□□ -0.15
COL5A1-208ENST00000618395 B4DXG7 233 aa14.09□□□□□ -0.15
COL5A1-208ENST00000618395 F7P08709 466 aaPredicted RBP14.09□□□□□ -0.15
COL5A1-208ENST00000618395 NDUFS1P28331 727 aa14.09□□□□□ -0.15
COL5A1-208ENST00000618395 PSMD8P48556 350 aa14.09□□□□□ -0.15
COL5A1-208ENST00000618395 EFNA3P52797 238 aa14.09□□□□□ -0.15
COL5A1-208ENST00000618395 PPP1CBP62140 327 aa14.09□□□□□ -0.15
COL5A1-208ENST00000618395 C9orf152Q5JTZ5 239 aa14.09□□□□□ -0.15
COL5A1-208ENST00000618395 TMEM244Q5VVB8 128 aa14.09□□□□□ -0.15
COL5A1-208ENST00000618395 VITQ6UXI7 678 aa14.09□□□□□ -0.15
COL5A1-208ENST00000618395 SCMH1Q96GD3 660 aa14.09□□□□□ -0.15
COL5A1-208ENST00000618395 M0R1X1 148 aa14.09□□□□□ -0.15
COL5A1-208ENST00000618395 GABRA3P34903 492 aa14.09□□□□□ -0.15
COL5A1-208ENST00000618395 TAF10Q12962 218 aa14.09□□□□□ -0.15
COL5A1-208ENST00000618395 ADGRG3Q86Y34 549 aa14.09□□□□□ -0.15
COL5A1-208ENST00000618395 CMTM2Q8TAZ6 248 aa14.09□□□□□ -0.15
COL5A1-208ENST00000618395 AKR1E2Q96JD6 320 aa14.09□□□□□ -0.15
COL5A1-208ENST00000618395 RNF19AQ9NV58 838 aa14.09□□□□□ -0.15
COL5A1-208ENST00000618395 PPP1R3DO95685 299 aa14.09□□□□□ -0.15
COL5A1-208ENST00000618395 PCSK6P29122 969 aa14.09□□□□□ -0.15
COL5A1-208ENST00000618395 DYNC2LI1Q8TCX1 351 aa14.09□□□□□ -0.15
COL5A1-208ENST00000618395 A0A1W2PPQ1 181 aa14.09□□□□□ -0.15
COL5A1-208ENST00000618395 DEDDO75618 318 aa14.09□□□□□ -0.15
COL5A1-208ENST00000618395 ALDOCP09972 364 aaKnown RBP14.09□□□□□ -0.15
COL5A1-208ENST00000618395 OR10J4P0C629 311 aa14.09□□□□□ -0.15
COL5A1-208ENST00000618395 MMP11P24347 488 aa14.09□□□□□ -0.15
COL5A1-208ENST00000618395 ZNF66Q6ZN08 573 aa14.09□□□□□ -0.15
COL5A1-208ENST00000618395 PLD4Q96BZ4 506 aa14.09□□□□□ -0.15
COL5A1-208ENST00000618395 ADGRG7Q96K78 797 aa14.09□□□□□ -0.15
COL5A1-208ENST00000618395 PLK3Q9H4B4 646 aa14.09□□□□□ -0.15
COL5A1-208ENST00000618395 TRABD2BA6NFA1 517 aa14.08□□□□□ -0.15
COL5A1-208ENST00000618395 OR8J2Q8NGG1 315 aa14.08□□□□□ -0.15
COL5A1-208ENST00000618395 LGALS14Q8TCE9 139 aa14.08□□□□□ -0.15
COL5A1-208ENST00000618395 GPR152Q8TDT2 470 aa14.08□□□□□ -0.15
COL5A1-208ENST00000618395 TRIB3Q96RU7 358 aa14.08□□□□□ -0.15
COL5A1-208ENST00000618395 NIFKQ9BYG3 293 aaKnown RBP14.08□□□□□ -0.15
COL5A1-208ENST00000618395 PARP12Q9H0J9 701 aaKnown RBP14.08□□□□□ -0.15
COL5A1-208ENST00000618395 TAC3Q9UHF0 121 aa14.08□□□□□ -0.15
COL5A1-208ENST00000618395 GRXCR2A6NFK2 248 aa14.08□□□□□ -0.15
COL5A1-208ENST00000618395 EMC8O43402 210 aa14.08□□□□□ -0.15
COL5A1-208ENST00000618395 SUSD5O60279 629 aa14.08□□□□□ -0.15
COL5A1-208ENST00000618395 CST3P01034 146 aaPredicted RBP14.08□□□□□ -0.15
COL5A1-208ENST00000618395 MMP2P08253 660 aa14.08□□□□□ -0.15
COL5A1-208ENST00000618395 CLCNKAP51800 687 aa14.08□□□□□ -0.15
COL5A1-208ENST00000618395 SLC25A11Q02978 314 aaKnown RBP14.08□□□□□ -0.15
COL5A1-208ENST00000618395 SQSTM1Q13501 440 aa14.08□□□□□ -0.15
COL5A1-208ENST00000618395 OR2A2Q6IF42 318 aa14.08□□□□□ -0.15
COL5A1-208ENST00000618395 DUS3LQ96G46 650 aaKnown RBP14.08□□□□□ -0.15
COL5A1-208ENST00000618395 ZNF845Q96IR2 970 aaPredicted RBP14.08□□□□□ -0.15
COL5A1-208ENST00000618395 AK1P00568 194 aa14.08□□□□□ -0.16
COL5A1-208ENST00000618395 AMTP48728 403 aa14.08□□□□□ -0.16
COL5A1-208ENST00000618395 MELKQ14680 651 aa14.08□□□□□ -0.16
COL5A1-208ENST00000618395 ZNF528Q3MIS6 628 aa14.08□□□□□ -0.16
COL5A1-208ENST00000618395 C11orf42Q8N5U0 333 aa14.08□□□□□ -0.16
COL5A1-208ENST00000618395 CXXC1Q9P0U4 656 aaPredicted RBP14.08□□□□□ -0.16
COL5A1-208ENST00000618395 RGPD8O14715 1765 aaPredicted RBP14.08□□□□□ -0.16
COL5A1-208ENST00000618395 HELTA6NFD8 242 aa14.08□□□□□ -0.16
COL5A1-208ENST00000618395 FTCDNL1E5RQL4 147 aa14.08□□□□□ -0.16
COL5A1-208ENST00000618395 FBXO45P0C2W1 286 aa14.08□□□□□ -0.16
COL5A1-208ENST00000618395 SFTA3P0C7M3 94 aa14.08□□□□□ -0.16
COL5A1-208ENST00000618395 SFTPDP35247 375 aa14.08□□□□□ -0.16
COL5A1-208ENST00000618395 GRM5P41594 1212 aa14.08□□□□□ -0.16
COL5A1-208ENST00000618395 NCR3LG1Q68D85 454 aa14.08□□□□□ -0.16
COL5A1-208ENST00000618395 AGTRAPQ6RW13 159 aa14.08□□□□□ -0.16
COL5A1-208ENST00000618395 ADAM11O75078 769 aa14.08□□□□□ -0.16
COL5A1-208ENST00000618395 SDHAF4Q5VUM1 108 aa14.08□□□□□ -0.16
COL5A1-208ENST00000618395 ZNF558Q96NG5 402 aa14.08□□□□□ -0.16
COL5A1-208ENST00000618395 HHATLQ9HCP6 504 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms