RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 GJD2Q9UKL4 321 aa6.88□□□□□ -1.31
PDE6A-205ENST00000617647 GBAP04062 536 aa6.88□□□□□ -1.31
PDE6A-205ENST00000617647 OR8U8P0C7N1 319 aa6.88□□□□□ -1.31
PDE6A-205ENST00000617647 TM4SF1P30408 202 aa6.88□□□□□ -1.31
PDE6A-205ENST00000617647 NOVP48745 357 aa6.88□□□□□ -1.31
PDE6A-205ENST00000617647 PPM1FP49593 454 aaPredicted RBP6.88□□□□□ -1.31
PDE6A-205ENST00000617647 IDH3GP51553 393 aaPredicted RBP6.88□□□□□ -1.31
PDE6A-205ENST00000617647 TAS2R43P59537 309 aa6.88□□□□□ -1.31
PDE6A-205ENST00000617647 MAPK14Q16539 360 aa6.88□□□□□ -1.31
PDE6A-205ENST00000617647 EXOSC6Q5RKV6 272 aaKnown RBP6.88□□□□□ -1.31
PDE6A-205ENST00000617647 LRIF1Q5T3J3 769 aa6.88□□□□□ -1.31
PDE6A-205ENST00000617647 VHLLQ6RSH7 139 aa6.88□□□□□ -1.31
PDE6A-205ENST00000617647 RNF165Q6ZSG1 346 aa6.88□□□□□ -1.31
PDE6A-205ENST00000617647 LRP11Q86VZ4 500 aa6.88□□□□□ -1.31
PDE6A-205ENST00000617647 THAP3Q8WTV1 239 aaPredicted RBP6.88□□□□□ -1.31
PDE6A-205ENST00000617647 SMIM4Q8WVI0 70 aa6.88□□□□□ -1.31
PDE6A-205ENST00000617647 RAB8BQ92930 207 aa6.88□□□□□ -1.31
PDE6A-205ENST00000617647 NTAN1Q96AB6 310 aa6.88□□□□□ -1.31
PDE6A-205ENST00000617647 NECAB3Q96P71 396 aaPredicted RBP6.88□□□□□ -1.31
PDE6A-205ENST00000617647 PBX4Q9BYU1 374 aa6.88□□□□□ -1.31
PDE6A-205ENST00000617647 RBM7Q9Y580 266 aaKnown RBP6.88□□□□□ -1.31
PDE6A-205ENST00000617647 TNRC6CQ9HCJ0 1690 aaKnown RBP6.87□□□□□ -1.31
PDE6A-205ENST00000617647 LOC102724200A0A096LPH7 203 aaPredicted RBP6.87□□□□□ -1.31
PDE6A-205ENST00000617647 FAM183AA6NL82 134 aa6.87□□□□□ -1.31
PDE6A-205ENST00000617647 RRP8O43159 456 aaKnown RBP6.87□□□□□ -1.31
PDE6A-205ENST00000617647 AKR1C4P17516 323 aa6.87□□□□□ -1.31
PDE6A-205ENST00000617647 TAGLN2P37802 199 aaKnown RBP6.87□□□□□ -1.31
PDE6A-205ENST00000617647 HTR5AP47898 357 aa6.87□□□□□ -1.31
PDE6A-205ENST00000617647 SF1Q15637 639 aaKnown RBP6.87□□□□□ -1.31
PDE6A-205ENST00000617647 TIGD5Q53EQ6 642 aa6.87□□□□□ -1.31
PDE6A-205ENST00000617647 RPS26P11Q5JNZ5 115 aaPredicted RBP6.87□□□□□ -1.31
PDE6A-205ENST00000617647 SOHLH1Q5JUK2 328 aa6.87□□□□□ -1.31
PDE6A-205ENST00000617647 UBE2NLQ5JXB2 153 aa6.87□□□□□ -1.31
PDE6A-205ENST00000617647 FRG2Q64ET8 278 aa6.87□□□□□ -1.31
PDE6A-205ENST00000617647 REEP3Q6NUK4 255 aa6.87□□□□□ -1.31
PDE6A-205ENST00000617647 SLC22A25Q6T423 547 aa6.87□□□□□ -1.31
PDE6A-205ENST00000617647 ADCK2Q7Z695 626 aa6.87□□□□□ -1.31
PDE6A-205ENST00000617647 MUC20Q8N307 709 aaPredicted RBP6.87□□□□□ -1.31
PDE6A-205ENST00000617647 OR1J1Q8NGS3 322 aa6.87□□□□□ -1.31
PDE6A-205ENST00000617647 SH3RF2Q8TEC5 729 aa6.87□□□□□ -1.31
PDE6A-205ENST00000617647 SECTM1Q8WVN6 248 aa6.87□□□□□ -1.31
PDE6A-205ENST00000617647 THRSPQ92748 146 aa6.87□□□□□ -1.31
PDE6A-205ENST00000617647 NKD1Q969G9 470 aa6.87□□□□□ -1.31
PDE6A-205ENST00000617647 SLC25A28Q96A46 364 aa6.87□□□□□ -1.31
PDE6A-205ENST00000617647 PHYHIPLQ96FC7 376 aa6.87□□□□□ -1.31
PDE6A-205ENST00000617647 FRG2BQ96QU4 278 aa6.87□□□□□ -1.31
PDE6A-205ENST00000617647 ARHGAP9Q9BRR9 750 aa6.87□□□□□ -1.31
PDE6A-205ENST00000617647 ACPTQ9BZG2 426 aa6.87□□□□□ -1.31
PDE6A-205ENST00000617647 OR52A5Q9H2C5 316 aa6.87□□□□□ -1.31
PDE6A-205ENST00000617647 EGLN3Q9H6Z9 239 aa6.87□□□□□ -1.31
PDE6A-205ENST00000617647 SEC61A2Q9H9S3 476 aa6.87□□□□□ -1.31
PDE6A-205ENST00000617647 FBRSQ9HAH7 460 aa6.87□□□□□ -1.31
PDE6A-205ENST00000617647 SGK2Q9HBY8 427 aa6.87□□□□□ -1.31
PDE6A-205ENST00000617647 MRPL22Q9NWU5 206 aaKnown RBP6.87□□□□□ -1.31
PDE6A-205ENST00000617647 VPS29Q9UBQ0 182 aa6.87□□□□□ -1.31
PDE6A-205ENST00000617647 OR14J1Q9UGF5 321 aa6.87□□□□□ -1.31
PDE6A-205ENST00000617647 WIF1Q9Y5W5 379 aa6.87□□□□□ -1.31
PDE6A-205ENST00000617647 USP3Q9Y6I4 520 aa6.87□□□□□ -1.31
PDE6A-205ENST00000617647 A0A0A6YYC8 382 aaPredicted RBP6.87□□□□□ -1.31
PDE6A-205ENST00000617647 GABARAPH6UMI1 98 aa6.87□□□□□ -1.31
PDE6A-205ENST00000617647 I3L1I5 382 aaPredicted RBP6.87□□□□□ -1.31
PDE6A-205ENST00000617647 PTHLHP12272 177 aa6.87□□□□□ -1.31
PDE6A-205ENST00000617647 ARF4P18085 180 aaPredicted RBP6.87□□□□□ -1.31
PDE6A-205ENST00000617647 ZFP36L2P47974 494 aaKnown RBP6.87□□□□□ -1.31
PDE6A-205ENST00000617647 SOX2P48431 317 aa6.87□□□□□ -1.31
PDE6A-205ENST00000617647 MANFP55145 182 aaKnown RBP6.87□□□□□ -1.31
PDE6A-205ENST00000617647 EBPQ15125 230 aaKnown RBP6.87□□□□□ -1.31
PDE6A-205ENST00000617647 TCEAL5Q5H9L2 206 aa6.87□□□□□ -1.31
PDE6A-205ENST00000617647 WDR88Q6ZMY6 472 aa6.87□□□□□ -1.31
PDE6A-205ENST00000617647 UBE2R2Q712K3 238 aaPredicted RBP6.87□□□□□ -1.31
PDE6A-205ENST00000617647 THEM5Q8N1Q8 247 aa6.87□□□□□ -1.31
PDE6A-205ENST00000617647 PLPP5Q8NEB5 264 aa6.87□□□□□ -1.31
PDE6A-205ENST00000617647 OR4K17Q8NGC6 315 aa6.87□□□□□ -1.31
PDE6A-205ENST00000617647 PSMG2Q969U7 264 aa6.87□□□□□ -1.31
PDE6A-205ENST00000617647 SLC2A13Q96QE2 648 aa6.87□□□□□ -1.31
PDE6A-205ENST00000617647 CNTNAP3Q9BZ76 1288 aa6.87□□□□□ -1.31
PDE6A-205ENST00000617647 SMOC1Q9H4F8 434 aa6.87□□□□□ -1.31
PDE6A-205ENST00000617647 ASB8Q9H765 288 aa6.87□□□□□ -1.31
PDE6A-205ENST00000617647 LHX9Q9NQ69 397 aa6.87□□□□□ -1.31
PDE6A-205ENST00000617647 TAS2R8Q9NYW2 309 aa6.87□□□□□ -1.31
PDE6A-205ENST00000617647 DOK5Q9P104 306 aa6.87□□□□□ -1.31
PDE6A-205ENST00000617647 NHSQ6T4R5 1651 aa6.87□□□□□ -1.31
PDE6A-205ENST00000617647 TRAV18A0A075B6X5 111 aa6.87□□□□□ -1.31
PDE6A-205ENST00000617647 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.87□□□□□ -1.31
PDE6A-205ENST00000617647 ANKUB1A6NFN9 424 aa6.87□□□□□ -1.31
PDE6A-205ENST00000617647 UGDHO60701 494 aa6.87□□□□□ -1.31
PDE6A-205ENST00000617647 AHSA1O95433 338 aa6.87□□□□□ -1.31
PDE6A-205ENST00000617647 FAM157BP0CG42 384 aa6.87□□□□□ -1.31
PDE6A-205ENST00000617647 AKAIN1P0CW23 69 aa6.87□□□□□ -1.31
PDE6A-205ENST00000617647 GPX2P18283 190 aa6.87□□□□□ -1.31
PDE6A-205ENST00000617647 OR1E1P30953 314 aa6.87□□□□□ -1.31
PDE6A-205ENST00000617647 IGFALSP35858 605 aa6.87□□□□□ -1.31
PDE6A-205ENST00000617647 LSSP48449 732 aa6.87□□□□□ -1.31
PDE6A-205ENST00000617647 ADPRHP54922 357 aa6.87□□□□□ -1.31
PDE6A-205ENST00000617647 RPS26P62854 115 aaKnown RBP6.87□□□□□ -1.31
PDE6A-205ENST00000617647 SLC14A2Q15849 920 aa6.87□□□□□ -1.31
PDE6A-205ENST00000617647 NKPD1Q17RQ9 610 aa6.87□□□□□ -1.31
PDE6A-205ENST00000617647 FAM151BQ6UXP7 276 aa6.87□□□□□ -1.31
PDE6A-205ENST00000617647 MOB3CQ70IA8 216 aa6.87□□□□□ -1.31
PDE6A-205ENST00000617647 C17orf64Q86WR6 236 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms