RNA–Protein interactions for RNA: ENST00000607092.1

CUX1-220, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-220ENST00000607092 POU3F1Q03052 451 aaPredicted RBP5.5□□□□□ -1.53
CUX1-220ENST00000607092 GPR68Q15743 365 aa5.5□□□□□ -1.53
CUX1-220ENST00000607092 TOMM34Q15785 309 aaPredicted RBP5.5□□□□□ -1.53
CUX1-220ENST00000607092 GSTA3Q16772 222 aa5.5□□□□□ -1.53
CUX1-220ENST00000607092 SMU1Q2TAY7 513 aa5.5□□□□□ -1.53
CUX1-220ENST00000607092 ARHGAP11BQ3KRB8 267 aa5.5□□□□□ -1.53
CUX1-220ENST00000607092 MMEL1Q495T6 779 aa5.5□□□□□ -1.53
CUX1-220ENST00000607092 GALNTL6Q49A17 601 aa5.5□□□□□ -1.53
CUX1-220ENST00000607092 RFTN2Q52LD8 501 aaPredicted RBP5.5□□□□□ -1.53
CUX1-220ENST00000607092 ZNF385BQ569K4 471 aa5.5□□□□□ -1.53
CUX1-220ENST00000607092 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.5□□□□□ -1.53
CUX1-220ENST00000607092 AP1ARQ63HQ0 302 aa5.5□□□□□ -1.53
CUX1-220ENST00000607092 ANKRD26P1Q6NSI1 321 aa5.5□□□□□ -1.53
CUX1-220ENST00000607092 SHQ1Q6PI26 577 aaKnown RBP5.5□□□□□ -1.53
CUX1-220ENST00000607092 DEF8Q6ZN54 512 aa5.5□□□□□ -1.53
CUX1-220ENST00000607092 ZNF440Q8IYI8 595 aa5.5□□□□□ -1.53
CUX1-220ENST00000607092 ARFGAP2Q8N6H7 521 aa5.5□□□□□ -1.53
CUX1-220ENST00000607092 ARIH2OSQ8N7S6 290 aa5.5□□□□□ -1.53
CUX1-220ENST00000607092 MAGEE2Q8TD90 523 aaPredicted RBP5.5□□□□□ -1.53
CUX1-220ENST00000607092 C3orf49Q96BT1 292 aa5.5□□□□□ -1.53
CUX1-220ENST00000607092 ZNF775Q96BV0 537 aaPredicted RBP5.5□□□□□ -1.53
CUX1-220ENST00000607092 COQ8BQ96D53 544 aa5.5□□□□□ -1.53
CUX1-220ENST00000607092 FOXN4Q96NZ1 517 aa5.5□□□□□ -1.53
CUX1-220ENST00000607092 ZIM3Q96PE6 472 aa5.5□□□□□ -1.53
CUX1-220ENST00000607092 SLC38A2Q96QD8 506 aa5.5□□□□□ -1.53
CUX1-220ENST00000607092 OR7D2Q96RA2 312 aa5.5□□□□□ -1.53
CUX1-220ENST00000607092 CCDC106Q9BWC9 280 aa5.5□□□□□ -1.53
CUX1-220ENST00000607092 ZNF350Q9GZX5 532 aa5.5□□□□□ -1.53
CUX1-220ENST00000607092 PLK3Q9H4B4 646 aa5.5□□□□□ -1.53
CUX1-220ENST00000607092 ZNF442Q9H7R0 627 aa5.5□□□□□ -1.53
CUX1-220ENST00000607092 CA10Q9NS85 328 aa5.5□□□□□ -1.53
CUX1-220ENST00000607092 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.5□□□□□ -1.53
CUX1-220ENST00000607092 SIRT3Q9NTG7 399 aaPredicted RBP5.5□□□□□ -1.53
CUX1-220ENST00000607092 GPATCH2Q9NW75 528 aa5.5□□□□□ -1.53
CUX1-220ENST00000607092 BAIAP2L1Q9UHR4 511 aa5.5□□□□□ -1.53
CUX1-220ENST00000607092 GRIP1Q9Y3R0 1128 aa5.5□□□□□ -1.53
CUX1-220ENST00000607092 WDR45Q9Y484 360 aa5.5□□□□□ -1.53
CUX1-220ENST00000607092 TRAF6Q9Y4K3 522 aa5.5□□□□□ -1.53
CUX1-220ENST00000607092 FLVCR1Q9Y5Y0 555 aa5.5□□□□□ -1.53
CUX1-220ENST00000607092 A0A096LPI6 279 aa5.49□□□□□ -1.53
CUX1-220ENST00000607092 ARPC4-TTLL3A0A0A6YYG9 625 aa5.49□□□□□ -1.53
CUX1-220ENST00000607092 NPIPA5A0A0B4J1W7 369 aa5.49□□□□□ -1.53
CUX1-220ENST00000607092 IGHV4-61A0A0C4DH41 118 aa5.49□□□□□ -1.53
CUX1-220ENST00000607092 SLC35F4A4IF30 521 aa5.49□□□□□ -1.53
CUX1-220ENST00000607092 NPIPA7E9PJI5 369 aa5.49□□□□□ -1.53
CUX1-220ENST00000607092 ATP6V1G2-DDX39BF2Z307 99 aa5.49□□□□□ -1.53
CUX1-220ENST00000607092 TRIM77I1YAP6 450 aa5.49□□□□□ -1.53
CUX1-220ENST00000607092 FAAHO00519 579 aa5.49□□□□□ -1.53
CUX1-220ENST00000607092 RIPK2O43353 540 aa5.49□□□□□ -1.53
CUX1-220ENST00000607092 OIP5O43482 229 aa5.49□□□□□ -1.53
CUX1-220ENST00000607092 AKAP8O43823 692 aaKnown RBP5.49□□□□□ -1.53
CUX1-220ENST00000607092 NPHS1O60500 1241 aa5.49□□□□□ -1.53
CUX1-220ENST00000607092 ENTPD5O75356 428 aa5.49□□□□□ -1.53
CUX1-220ENST00000607092 UGT2B17O75795 530 aa5.49□□□□□ -1.53
CUX1-220ENST00000607092 IGHV3-9P01782 118 aa5.49□□□□□ -1.53
CUX1-220ENST00000607092 TFP02787 698 aa5.49□□□□□ -1.53
CUX1-220ENST00000607092 GPIP06744 558 aa5.49□□□□□ -1.53
CUX1-220ENST00000607092 ITGA5P08648 1049 aa5.49□□□□□ -1.53
CUX1-220ENST00000607092 LINC00032P0C843 101 aa5.49□□□□□ -1.53
CUX1-220ENST00000607092 NPIPA8P0DM63 369 aa5.49□□□□□ -1.53
CUX1-220ENST00000607092 LAMP1P11279 417 aa5.49□□□□□ -1.53
CUX1-220ENST00000607092 DAOP14920 347 aa5.49□□□□□ -1.53
CUX1-220ENST00000607092 ANPEPP15144 967 aa5.49□□□□□ -1.53
CUX1-220ENST00000607092 NPR2P20594 1047 aa5.49□□□□□ -1.53
CUX1-220ENST00000607092 EVX1P49640 407 aa5.49□□□□□ -1.53
CUX1-220ENST00000607092 COMPP49747 757 aaPredicted RBP5.49□□□□□ -1.53
CUX1-220ENST00000607092 RNF144AP50876 292 aaPredicted RBP5.49□□□□□ -1.53
CUX1-220ENST00000607092 DVL1P1P54792 670 aaPredicted RBP5.49□□□□□ -1.53
CUX1-220ENST00000607092 COPZ1P61923 177 aa5.49□□□□□ -1.53
CUX1-220ENST00000607092 H3F3AP84243 136 aa5.49□□□□□ -1.53
CUX1-220ENST00000607092 LRRC74AQ0VAA2 488 aa5.49□□□□□ -1.53
CUX1-220ENST00000607092 CASP8Q14790 479 aa5.49□□□□□ -1.53
CUX1-220ENST00000607092 SLC17A1Q14916 467 aa5.49□□□□□ -1.53
CUX1-220ENST00000607092 DPY19L1Q2PZI1 675 aa5.49□□□□□ -1.53
CUX1-220ENST00000607092 ANXA8L1Q5VT79 327 aa5.49□□□□□ -1.53
CUX1-220ENST00000607092 KANK2Q63ZY3 851 aa5.49□□□□□ -1.53
CUX1-220ENST00000607092 CLEC6AQ6EIG7 209 aa5.49□□□□□ -1.53
CUX1-220ENST00000607092 TMEM225Q6GV28 225 aa5.49□□□□□ -1.53
CUX1-220ENST00000607092 B3GLCTQ6Y288 498 aa5.49□□□□□ -1.53
CUX1-220ENST00000607092 C6orf120Q7Z4R8 191 aa5.49□□□□□ -1.53
CUX1-220ENST00000607092 SPATA19Q7Z5L4 167 aa5.49□□□□□ -1.53
CUX1-220ENST00000607092 GLCCI1Q86VQ1 547 aa5.49□□□□□ -1.53
CUX1-220ENST00000607092 SNX32Q86XE0 403 aa5.49□□□□□ -1.53
CUX1-220ENST00000607092 ZNF786Q8N393 782 aa5.49□□□□□ -1.53
CUX1-220ENST00000607092 MREGQ8N565 214 aa5.49□□□□□ -1.53
CUX1-220ENST00000607092 TRIML2Q8N7C3 387 aa5.49□□□□□ -1.53
CUX1-220ENST00000607092 C3orf56Q8N813 242 aa5.49□□□□□ -1.53
CUX1-220ENST00000607092 WDR31Q8NA23 367 aa5.49□□□□□ -1.53
CUX1-220ENST00000607092 FNDC5Q8NAU1 212 aa5.49□□□□□ -1.53
CUX1-220ENST00000607092 FAM71CQ8NEG0 241 aa5.49□□□□□ -1.53
CUX1-220ENST00000607092 NUP37Q8NFH4 326 aa5.49□□□□□ -1.53
CUX1-220ENST00000607092 CLHC1Q8NHS4 586 aa5.49□□□□□ -1.53
CUX1-220ENST00000607092 MIPOL1Q8TD10 442 aa5.49□□□□□ -1.53
CUX1-220ENST00000607092 AENQ8WTP8 325 aaKnown RBP5.49□□□□□ -1.53
CUX1-220ENST00000607092 TWIST2Q8WVJ9 160 aa5.49□□□□□ -1.53
CUX1-220ENST00000607092 WDR60Q8WVS4 1066 aa5.49□□□□□ -1.53
CUX1-220ENST00000607092 OTUB1Q96FW1 271 aaPredicted RBP5.49□□□□□ -1.53
CUX1-220ENST00000607092 SLC35G5Q96KT7 338 aa5.49□□□□□ -1.53
CUX1-220ENST00000607092 SORCS2Q96PQ0 1159 aa5.49□□□□□ -1.53
CUX1-220ENST00000607092 DUSP26Q9BV47 211 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 124.1 ms