RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 IDUAP35475 653 aa12.41□□□□□ -0.42
RNF40-212ENST00000602784 CBX1P83916 185 aa12.41□□□□□ -0.42
RNF40-212ENST00000602784 EGR4Q05215 589 aa12.41□□□□□ -0.42
RNF40-212ENST00000602784 GUSBP1Q15486 140 aa12.41□□□□□ -0.42
RNF40-212ENST00000602784 SLC25A35Q3KQZ1 300 aa12.41□□□□□ -0.42
RNF40-212ENST00000602784 MTX3Q5HYI7 312 aa12.41□□□□□ -0.42
RNF40-212ENST00000602784 C1orf140Q5VVS0 124 aa12.41□□□□□ -0.42
RNF40-212ENST00000602784 PGM2L1Q6PCE3 622 aa12.41□□□□□ -0.42
RNF40-212ENST00000602784 FCRLAQ7L513 359 aa12.41□□□□□ -0.42
RNF40-212ENST00000602784 TSPYL5Q86VY4 417 aaPredicted RBP12.41□□□□□ -0.42
RNF40-212ENST00000602784 OR6S1Q8NH40 331 aa12.41□□□□□ -0.42
RNF40-212ENST00000602784 MFSD8Q8NHS3 518 aa12.41□□□□□ -0.42
RNF40-212ENST00000602784 RNF128Q8TEB7 428 aa12.41□□□□□ -0.42
RNF40-212ENST00000602784 CA5BP1Q8WTZ4 195 aa12.41□□□□□ -0.42
RNF40-212ENST00000602784 INTS12Q96CB8 462 aaKnown RBP12.41□□□□□ -0.42
RNF40-212ENST00000602784 GMPPAQ96IJ6 420 aaPredicted RBP12.41□□□□□ -0.42
RNF40-212ENST00000602784 PSMG3-AS1Q96PY0 264 aa12.41□□□□□ -0.42
RNF40-212ENST00000602784 THTPAQ9BU02 230 aa12.41□□□□□ -0.42
RNF40-212ENST00000602784 ZNF426Q9BUY5 554 aa12.41□□□□□ -0.42
RNF40-212ENST00000602784 RIMS3Q9UJD0 308 aa12.41□□□□□ -0.42
RNF40-212ENST00000602784 IGKV1D-42A0A075B6H8 117 aa12.4□□□□□ -0.42
RNF40-212ENST00000602784 A0A1W2PNV4 684 aa12.4□□□□□ -0.42
RNF40-212ENST00000602784 OR2T1O43869 369 aa12.4□□□□□ -0.42
RNF40-212ENST00000602784 CYTIPO60759 359 aa12.4□□□□□ -0.42
RNF40-212ENST00000602784 FZD7O75084 574 aa12.4□□□□□ -0.42
RNF40-212ENST00000602784 SS18L1O75177 396 aaPredicted RBP12.4□□□□□ -0.42
RNF40-212ENST00000602784 DNAJC8O75937 253 aaPredicted RBP12.4□□□□□ -0.42
RNF40-212ENST00000602784 PRKD3O94806 890 aa12.4□□□□□ -0.42
RNF40-212ENST00000602784 AHSA1O95433 338 aa12.4□□□□□ -0.42
RNF40-212ENST00000602784 THY1P04216 161 aa12.4□□□□□ -0.42
RNF40-212ENST00000602784 IMPDH2P12268 514 aa12.4□□□□□ -0.42
RNF40-212ENST00000602784 IFNA8P32881 189 aa12.4□□□□□ -0.42
RNF40-212ENST00000602784 OR2B6P58173 313 aa12.4□□□□□ -0.42
RNF40-212ENST00000602784 TAS2R41P59536 307 aa12.4□□□□□ -0.42
RNF40-212ENST00000602784 TRAP1Q12931 704 aaKnown RBP12.4□□□□□ -0.42
RNF40-212ENST00000602784 FOXF2Q12947 444 aa12.4□□□□□ -0.42
RNF40-212ENST00000602784 PIN1Q13526 163 aaPredicted RBP12.4□□□□□ -0.42
RNF40-212ENST00000602784 PDK3Q15120 406 aa12.4□□□□□ -0.42
RNF40-212ENST00000602784 LCN8Q6JVE9 175 aa12.4□□□□□ -0.42
RNF40-212ENST00000602784 PAQR6Q6TCH4 344 aa12.4□□□□□ -0.42
RNF40-212ENST00000602784 PLXDC2Q6UX71 529 aa12.4□□□□□ -0.42
RNF40-212ENST00000602784 DEF8Q6ZN54 512 aa12.4□□□□□ -0.42
RNF40-212ENST00000602784 GDF7Q7Z4P5 450 aa12.4□□□□□ -0.42
RNF40-212ENST00000602784 ROBO4Q8WZ75 1007 aa12.4□□□□□ -0.42
RNF40-212ENST00000602784 ASB9Q96DX5 294 aa12.4□□□□□ -0.42
RNF40-212ENST00000602784 SLC41A3Q96GZ6 507 aa12.4□□□□□ -0.42
RNF40-212ENST00000602784 PYURFQ96I23 114 aa12.4□□□□□ -0.42
RNF40-212ENST00000602784 EPYCQ99645 322 aa12.4□□□□□ -0.42
RNF40-212ENST00000602784 TACO1Q9BSH4 297 aaKnown RBP12.4□□□□□ -0.42
RNF40-212ENST00000602784 SLC19A3Q9BZV2 496 aa12.4□□□□□ -0.42
RNF40-212ENST00000602784 AMBRA1Q9C0C7 1298 aa12.4□□□□□ -0.42
RNF40-212ENST00000602784 PIGMQ9H3S5 423 aa12.4□□□□□ -0.42
RNF40-212ENST00000602784 KLF2Q9Y5W3 355 aaPredicted RBP12.4□□□□□ -0.42
RNF40-212ENST00000602784 INTS1Q8N201 2190 aaKnown RBP12.39□□□□□ -0.43
RNF40-212ENST00000602784 TRAV36DV7A0A075B6V5 113 aa12.39□□□□□ -0.43
RNF40-212ENST00000602784 SMAD9O15198 467 aaKnown RBP12.39□□□□□ -0.43
RNF40-212ENST00000602784 GSC2O15499 205 aa12.39□□□□□ -0.43
RNF40-212ENST00000602784 TNFSF13O75888 250 aa12.39□□□□□ -0.43
RNF40-212ENST00000602784 PDE5AO76074 875 aa12.39□□□□□ -0.43
RNF40-212ENST00000602784 FPR1P21462 350 aa12.39□□□□□ -0.43
RNF40-212ENST00000602784 RBM34P42696 430 aaKnown RBP12.39□□□□□ -0.43
RNF40-212ENST00000602784 KIR2DL2P43627 348 aaPredicted RBP12.39□□□□□ -0.43
RNF40-212ENST00000602784 MS4A2Q01362 244 aa12.39□□□□□ -0.43
RNF40-212ENST00000602784 ST3GAL3Q11203 375 aa12.39□□□□□ -0.43
RNF40-212ENST00000602784 MFSD13AQ14CX5 517 aa12.39□□□□□ -0.43
RNF40-212ENST00000602784 FAM69AQ5T7M9 428 aa12.39□□□□□ -0.43
RNF40-212ENST00000602784 FAM214BQ7L5A3 538 aa12.39□□□□□ -0.43
RNF40-212ENST00000602784 DHFR2Q86XF0 187 aa12.39□□□□□ -0.43
RNF40-212ENST00000602784 LIX1LQ8IVB5 337 aa12.39□□□□□ -0.43
RNF40-212ENST00000602784 MCEMP1Q8IX19 187 aa12.39□□□□□ -0.43
RNF40-212ENST00000602784 GCNT2Q8N0V5 402 aa12.39□□□□□ -0.43
RNF40-212ENST00000602784 PIGXQ8TBF5 258 aa12.39□□□□□ -0.43
RNF40-212ENST00000602784 RNF217Q8TC41 542 aa12.39□□□□□ -0.43
RNF40-212ENST00000602784 C7orf34Q96L11 122 aa12.39□□□□□ -0.43
RNF40-212ENST00000602784 PRRC1Q96M27 445 aa12.39□□□□□ -0.43
RNF40-212ENST00000602784 HS6ST2Q96MM7 605 aa12.39□□□□□ -0.43
RNF40-212ENST00000602784 PRSS27Q9BQR3 290 aa12.39□□□□□ -0.43
RNF40-212ENST00000602784 NAA11Q9BSU3 229 aaPredicted RBP12.39□□□□□ -0.43
RNF40-212ENST00000602784 PTDSS2Q9BVG9 487 aa12.39□□□□□ -0.43
RNF40-212ENST00000602784 TAPBPLQ9BX59 468 aa12.39□□□□□ -0.43
RNF40-212ENST00000602784 MMADHCQ9H3L0 296 aaPredicted RBP12.39□□□□□ -0.43
RNF40-212ENST00000602784 BCO1Q9HAY6 547 aa12.39□□□□□ -0.43
RNF40-212ENST00000602784 KCNJ16Q9NPI9 418 aa12.39□□□□□ -0.43
RNF40-212ENST00000602784 KLHL9Q9P2J3 617 aa12.39□□□□□ -0.43
RNF40-212ENST00000602784 SLC7A7Q9UM01 511 aa12.39□□□□□ -0.43
RNF40-212ENST00000602784 A4GNTQ9UNA3 340 aa12.39□□□□□ -0.43
RNF40-212ENST00000602784 ENPP4Q9Y6X5 453 aa12.39□□□□□ -0.43
RNF40-212ENST00000602784 PTPN13Q12923 2485 aa12.39□□□□□ -0.43
RNF40-212ENST00000602784 COL12A1Q99715 3063 aa12.39□□□□□ -0.43
RNF40-212ENST00000602784 DOPEY2Q9Y3R5 2298 aa12.39□□□□□ -0.43
RNF40-212ENST00000602784 MPDZO75970 2070 aa12.38□□□□□ -0.43
RNF40-212ENST00000602784 IGKV3D-15A0A087WSY6 115 aa12.38□□□□□ -0.43
RNF40-212ENST00000602784 HTR3EA5X5Y0 456 aa12.38□□□□□ -0.43
RNF40-212ENST00000602784 ZNF724A8MTY0 619 aa12.38□□□□□ -0.43
RNF40-212ENST00000602784 FTCDNL1E5RQL4 147 aa12.38□□□□□ -0.43
RNF40-212ENST00000602784 EBAG9O00559 213 aa12.38□□□□□ -0.43
RNF40-212ENST00000602784 ACOT8O14734 319 aa12.38□□□□□ -0.43
RNF40-212ENST00000602784 PLGP00747 810 aaPredicted RBP12.38□□□□□ -0.43
RNF40-212ENST00000602784 IGF2P01344 180 aa12.38□□□□□ -0.43
RNF40-212ENST00000602784 SEMG1P04279 462 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms