RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 NXPH3O95157 252 aa8.15□□□□□ -1.11
CSMD1-216ENST00000602557 IL1AP01583 271 aa8.15□□□□□ -1.11
CSMD1-216ENST00000602557 TMEM225BP0DP42 221 aa8.15□□□□□ -1.11
CSMD1-216ENST00000602557 CX3CR1P49238 355 aa8.15□□□□□ -1.11
CSMD1-216ENST00000602557 CLDN8P56748 225 aa8.15□□□□□ -1.11
CSMD1-216ENST00000602557 NKX3-2P78367 333 aa8.15□□□□□ -1.11
CSMD1-216ENST00000602557 HAGHQ16775 308 aa8.15□□□□□ -1.11
CSMD1-216ENST00000602557 FAM74A1Q5RGS3 127 aa8.15□□□□□ -1.11
CSMD1-216ENST00000602557 LARP4Q71RC2 724 aaKnown RBP eCLIP8.15□□□□□ -1.11
CSMD1-216ENST00000602557 ECHDC3Q96DC8 303 aa8.15□□□□□ -1.11
CSMD1-216ENST00000602557 ZNF778Q96MU6 729 aa8.15□□□□□ -1.11
CSMD1-216ENST00000602557 MEPEQ9NQ76 525 aaPredicted RBP8.15□□□□□ -1.11
CSMD1-216ENST00000602557 SYT5O00445 386 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 SRPX2O60687 465 aaPredicted RBP8.14□□□□□ -1.11
CSMD1-216ENST00000602557 MPIG6BO95866 241 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 MAKP20794 623 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 MRPL19P49406 292 aaKnown RBP8.14□□□□□ -1.11
CSMD1-216ENST00000602557 IER5LQ5T953 404 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 FAM69BQ5VUD6 431 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 OR51Q1Q8NH59 317 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 FBXW5Q969U6 566 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 SGCZQ96LD1 299 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 HERPUD2Q9BSE4 406 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 NAA11Q9BSU3 229 aaPredicted RBP8.14□□□□□ -1.11
CSMD1-216ENST00000602557 PDE7BQ9NP56 450 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 HEATR5BQ9P2D3 2071 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 ANKRD61A6NGH8 418 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 LATO43561 262 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 FOLR1P15328 257 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 CPOXP36551 454 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 KCPQ6ZWJ8 1503 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 TMEM82A0PJX8 343 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 SELENBP1Q13228 472 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 OR2T2Q6IF00 324 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 MS4A4EQ96PG1 132 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 DCAF13Q9NV06 445 aaKnown RBP8.14□□□□□ -1.11
CSMD1-216ENST00000602557 RPH3ALQ9UNE2 315 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 ZNF840PA6NDX5 716 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 E7ESA3 106 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 M0QYG6 137 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 F2P00734 622 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 IMPA1P29218 277 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 CLDN12P56749 244 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 CXADRP78310 365 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 RBMS2Q15434 407 aaKnown RBP8.14□□□□□ -1.11
CSMD1-216ENST00000602557 EEF1A1P5Q5VTE0 462 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 OR8J2Q8NGG1 315 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 MED20Q9H944 212 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 RLIMQ9NVW2 624 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 PGAP2Q9UHJ9 254 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 GRXCR2A6NFK2 248 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 ZNF888P0CJ79 500 aaPredicted RBP8.14□□□□□ -1.11
CSMD1-216ENST00000602557 GDPD3Q7L5L3 318 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 MS4A15Q8N5U1 240 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 TMEM102Q8N9M5 508 aaPredicted RBP8.14□□□□□ -1.11
CSMD1-216ENST00000602557 BTF3L4Q96K17 158 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 DPH1Q9BZG8 443 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 DDX31Q9H8H2 851 aaKnown RBP8.14□□□□□ -1.11
CSMD1-216ENST00000602557 FTSJ1Q9UET6 329 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 OSGIN2Q9Y236 505 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 DOCK9Q9BZ29 2069 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 A0A087WV62 115 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 CBX7O95931 251 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 FAM163BP0C2L3 166 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 SIX1Q15475 284 aaPredicted RBP8.14□□□□□ -1.11
CSMD1-216ENST00000602557 ACSM3Q53FZ2 586 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 PHYHD1Q5SRE7 291 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 UBAC2Q8NBM4 344 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 LMO3Q8TAP4 145 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 DDIT4LQ96D03 193 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 RAB3CQ96E17 227 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 PIGQQ9BRB3 760 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 NCDNQ9UBB6 729 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 CLN5O75503 358 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 TCRBP04435 133 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 PIGAP37287 484 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 SOX4Q06945 474 aaPredicted RBP8.14□□□□□ -1.11
CSMD1-216ENST00000602557 MANEALQ5VSG8 457 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 LETMD1Q6P1Q0 360 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 FUBP1Q96AE4 644 aaKnown RBP8.14□□□□□ -1.11
CSMD1-216ENST00000602557 SYT17Q9BSW7 474 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 OR52A5Q9H2C5 316 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 TRAV34A0A0B4J273 112 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 ANGPTL7O43827 346 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 LILRB3O75022 631 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 KCNK2O95069 426 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 ZNF25P17030 456 aaPredicted RBP8.14□□□□□ -1.11
CSMD1-216ENST00000602557 LAP3P28838 519 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 HABP2Q14520 560 aaPredicted RBP8.14□□□□□ -1.11
CSMD1-216ENST00000602557 MAMDC2Q7Z304 686 aaPredicted RBP8.14□□□□□ -1.11
CSMD1-216ENST00000602557 ZC3H3Q8IXZ2 948 aaKnown RBP8.14□□□□□ -1.11
CSMD1-216ENST00000602557 ZNF561Q8N587 486 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 NLGN4YQ8NFZ3 816 aaPredicted RBP8.14□□□□□ -1.11
CSMD1-216ENST00000602557 OR9A2Q8NGT5 310 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 RSRP1Q9BUV0 290 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 OPA3Q9H6K4 179 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 CCSO14618 274 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 CNR1P21554 472 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 FCER1GP30273 86 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 MC3RP41968 323 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms