RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 IL20RAQ9UHF4 553 aa18.23■□□□□ 0.51
PNKP-214ENST00000600573 OSGIN1Q9UJX0 560 aa18.23■□□□□ 0.51
PNKP-214ENST00000600573 EXOSC1Q9Y3B2 195 aaKnown RBP18.23■□□□□ 0.51
PNKP-214ENST00000600573 IGKV1D-42A0A075B6H8 117 aa18.23■□□□□ 0.51
PNKP-214ENST00000600573 TRAV27A0A087WT01 109 aa18.23■□□□□ 0.51
PNKP-214ENST00000600573 SLC25A12O75746 678 aa18.23■□□□□ 0.51
PNKP-214ENST00000600573 MST1P26927 711 aa18.23■□□□□ 0.51
PNKP-214ENST00000600573 RBMS1P29558 406 aaKnown RBP18.23■□□□□ 0.51
PNKP-214ENST00000600573 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.23■□□□□ 0.51
PNKP-214ENST00000600573 H3F3CQ6NXT2 135 aa18.23■□□□□ 0.51
PNKP-214ENST00000600573 CXXC5Q7LFL8 322 aaKnown RBP18.23■□□□□ 0.51
PNKP-214ENST00000600573 GPALPP1Q8IXQ4 340 aa18.23■□□□□ 0.51
PNKP-214ENST00000600573 PROKR2Q8NFJ6 384 aa18.23■□□□□ 0.51
PNKP-214ENST00000600573 OR6S1Q8NH40 331 aa18.23■□□□□ 0.51
PNKP-214ENST00000600573 STK35Q8TDR2 534 aa18.23■□□□□ 0.51
PNKP-214ENST00000600573 SGCZQ96LD1 299 aa18.23■□□□□ 0.51
PNKP-214ENST00000600573 TNFRSF13CQ96RJ3 184 aa18.23■□□□□ 0.51
PNKP-214ENST00000600573 P4HTMQ9NXG6 502 aa18.23■□□□□ 0.51
PNKP-214ENST00000600573 H2AFY2Q9P0M6 372 aaPredicted RBP18.23■□□□□ 0.51
PNKP-214ENST00000600573 PPP4R1LQ9P1A2 415 aa18.23■□□□□ 0.51
PNKP-214ENST00000600573 WIF1Q9Y5W5 379 aa18.23■□□□□ 0.51
PNKP-214ENST00000600573 ETV2O00321 342 aaPredicted RBP18.22■□□□□ 0.51
PNKP-214ENST00000600573 IDH3BO43837 385 aa18.22■□□□□ 0.51
PNKP-214ENST00000600573 AIREO43918 545 aa18.22■□□□□ 0.51
PNKP-214ENST00000600573 HSMCR30P0CW71 290 aa18.22■□□□□ 0.51
PNKP-214ENST00000600573 PEPDP12955 493 aa18.22■□□□□ 0.51
PNKP-214ENST00000600573 GADD45AP24522 165 aa18.22■□□□□ 0.51
PNKP-214ENST00000600573 HTR1FP30939 366 aa18.22■□□□□ 0.51
PNKP-214ENST00000600573 APOBEC1P41238 236 aaKnown RBP18.22■□□□□ 0.51
PNKP-214ENST00000600573 CASP3P42574 277 aa18.22■□□□□ 0.51
PNKP-214ENST00000600573 RGS6P49758 472 aa18.22■□□□□ 0.51
PNKP-214ENST00000600573 CLK1P49759 484 aaKnown RBP18.22■□□□□ 0.51
PNKP-214ENST00000600573 TMED1Q13445 227 aa18.22■□□□□ 0.51
PNKP-214ENST00000600573 ZNF74Q16587 644 aa18.22■□□□□ 0.51
PNKP-214ENST00000600573 IGF2-ASQ6U949 168 aa18.22■□□□□ 0.51
PNKP-214ENST00000600573 THSD4Q6ZMP0 1018 aa18.22■□□□□ 0.51
PNKP-214ENST00000600573 DPY19L2P2Q6ZN68 376 aa18.22■□□□□ 0.51
PNKP-214ENST00000600573 NANOGP1Q8N7R0 232 aa18.22■□□□□ 0.51
PNKP-214ENST00000600573 OR10G3Q8NGC4 313 aa18.22■□□□□ 0.51
PNKP-214ENST00000600573 OR51A7Q8NH64 312 aa18.22■□□□□ 0.51
PNKP-214ENST00000600573 CDCP1Q9H5V8 836 aa18.22■□□□□ 0.51
PNKP-214ENST00000600573 HINT3Q9NQE9 182 aaKnown RBP18.22■□□□□ 0.51
PNKP-214ENST00000600573 CMC2Q9NRP2 79 aa18.22■□□□□ 0.51
PNKP-214ENST00000600573 CHCHD3Q9NX63 227 aaKnown RBP18.22■□□□□ 0.51
PNKP-214ENST00000600573 FBXL4Q9UKA2 621 aa18.22■□□□□ 0.51
PNKP-214ENST00000600573 TRAV36DV7A0A075B6V5 113 aa18.21■□□□□ 0.51
PNKP-214ENST00000600573 TNFSF12-TNFSF13A0A0A6YY99 330 aa18.21■□□□□ 0.51
PNKP-214ENST00000600573 SPAARA0A1B0GVQ0 90 aa18.21■□□□□ 0.51
PNKP-214ENST00000600573 RIIAD1A6NNX1 92 aa18.21■□□□□ 0.51
PNKP-214ENST00000600573 A8MVM7 634 aa18.21■□□□□ 0.51
PNKP-214ENST00000600573 GNB5O14775 395 aa18.21■□□□□ 0.51
PNKP-214ENST00000600573 MT-ATP6P00846 226 aa18.21■□□□□ 0.51
PNKP-214ENST00000600573 IFNGP01579 166 aa18.21■□□□□ 0.51
PNKP-214ENST00000600573 HK1P19367 917 aa18.21■□□□□ 0.51
PNKP-214ENST00000600573 SOX3P41225 446 aa18.21■□□□□ 0.51
PNKP-214ENST00000600573 VBP1P61758 197 aa18.21■□□□□ 0.51
PNKP-214ENST00000600573 RPS18P62269 152 aaKnown RBP18.21■□□□□ 0.51
PNKP-214ENST00000600573 SPHARQ15513 63 aa18.21■□□□□ 0.51
PNKP-214ENST00000600573 TSTQ16762 297 aaKnown RBP18.21■□□□□ 0.51
PNKP-214ENST00000600573 TIMM50Q3ZCQ8 353 aa18.21■□□□□ 0.51
PNKP-214ENST00000600573 ARHGAP11AQ6P4F7 1023 aa18.21■□□□□ 0.51
PNKP-214ENST00000600573 FRMD6Q96NE9 622 aa18.21■□□□□ 0.51
PNKP-214ENST00000600573 PHOX2BQ99453 314 aa18.21■□□□□ 0.51
PNKP-214ENST00000600573 FKRPQ9H9S5 495 aa18.21■□□□□ 0.51
PNKP-214ENST00000600573 MCCC2Q9HCC0 563 aa18.21■□□□□ 0.51
PNKP-214ENST00000600573 NANSQ9NR45 359 aa18.21■□□□□ 0.51
PNKP-214ENST00000600573 ZNF229Q9UJW7 825 aa18.21■□□□□ 0.51
PNKP-214ENST00000600573 SLC6A5Q9Y345 797 aa18.21■□□□□ 0.51
PNKP-214ENST00000600573 OTOGLQ3ZCN5 2332 aa18.2■□□□□ 0.5
PNKP-214ENST00000600573 KIF26BQ2KJY2 2108 aa18.2■□□□□ 0.5
PNKP-214ENST00000600573 TMED7-TICAM2A0A0A6YYA0 188 aa18.2■□□□□ 0.5
PNKP-214ENST00000600573 FAM47E-STBD1D6RA91 191 aa18.2■□□□□ 0.5
PNKP-214ENST00000600573 CCRL2O00421 344 aa18.2■□□□□ 0.5
PNKP-214ENST00000600573 CDK2AP1O14519 115 aa18.2■□□□□ 0.5
PNKP-214ENST00000600573 OR2T1O43869 369 aa18.2■□□□□ 0.5
PNKP-214ENST00000600573 SLC2A10O95528 541 aa18.2■□□□□ 0.5
PNKP-214ENST00000600573 HIST1H2ABP04908 130 aa18.2■□□□□ 0.5
PNKP-214ENST00000600573 FKBP2P26885 142 aaKnown RBP18.2■□□□□ 0.5
PNKP-214ENST00000600573 PTGDSP41222 190 aa18.2■□□□□ 0.5
PNKP-214ENST00000600573 NCS1P62166 190 aa18.2■□□□□ 0.5
PNKP-214ENST00000600573 LSM3P62310 102 aaKnown RBP18.2■□□□□ 0.5
PNKP-214ENST00000600573 FOXK2Q01167 660 aa18.2■□□□□ 0.5
PNKP-214ENST00000600573 ARMC4Q5T2S8 1044 aa18.2■□□□□ 0.5
PNKP-214ENST00000600573 NIPAL3Q6P499 406 aa18.2■□□□□ 0.5
PNKP-214ENST00000600573 HIST3H2AQ7L7L0 130 aa18.2■□□□□ 0.5
PNKP-214ENST00000600573 CPOQ8IVL8 374 aa18.2■□□□□ 0.5
PNKP-214ENST00000600573 TMEM156Q8N614 296 aa18.2■□□□□ 0.5
PNKP-214ENST00000600573 NDNFQ8TB73 568 aa18.2■□□□□ 0.5
PNKP-214ENST00000600573 TBC1D15Q8TC07 691 aa18.2■□□□□ 0.5
PNKP-214ENST00000600573 RPL3LQ92901 407 aaKnown RBP18.2■□□□□ 0.5
PNKP-214ENST00000600573 HIST1H2ACQ93077 130 aa18.2■□□□□ 0.5
PNKP-214ENST00000600573 OPALINQ96PE5 141 aa18.2■□□□□ 0.5
PNKP-214ENST00000600573 GPX7Q96SL4 187 aaPredicted RBP18.2■□□□□ 0.5
PNKP-214ENST00000600573 TAPBPLQ9BX59 468 aa18.2■□□□□ 0.5
PNKP-214ENST00000600573 CLEC2DQ9UHP7 191 aa18.2■□□□□ 0.5
PNKP-214ENST00000600573 HIF3AQ9Y2N7 669 aa18.2■□□□□ 0.5
PNKP-214ENST00000600573 TMED7Q9Y3B3 224 aa18.2■□□□□ 0.5
PNKP-214ENST00000600573 CHCHD2Q9Y6H1 151 aaPredicted RBP18.2■□□□□ 0.5
PNKP-214ENST00000600573 ANKRD33BA6NCL7 494 aa18.2■□□□□ 0.5
PNKP-214ENST00000600573 PCNX2A6NKB5 2137 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms