RNA–Protein interactions for RNA: ENST00000599342.5

VRK3-216, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-216ENST00000599342 IMPDH2P12268 514 aa8.62□□□□□ -1.03
VRK3-216ENST00000599342 ETFAP13804 333 aa8.62□□□□□ -1.03
VRK3-216ENST00000599342 NCF2P19878 526 aaPredicted RBP8.62□□□□□ -1.03
VRK3-216ENST00000599342 CD40P25942 277 aa8.62□□□□□ -1.03
VRK3-216ENST00000599342 NUDT6P53370 316 aa8.62□□□□□ -1.03
VRK3-216ENST00000599342 DSTNP60981 165 aa8.62□□□□□ -1.03
VRK3-216ENST00000599342 TGFBR3Q03167 851 aa8.62□□□□□ -1.03
VRK3-216ENST00000599342 SPOCK1Q08629 439 aa8.62□□□□□ -1.03
VRK3-216ENST00000599342 CEACAM7Q14002 265 aa8.62□□□□□ -1.03
VRK3-216ENST00000599342 LARS2Q15031 903 aaKnown RBP8.62□□□□□ -1.03
VRK3-216ENST00000599342 OR7A5Q15622 319 aa8.62□□□□□ -1.03
VRK3-216ENST00000599342 C6orf10Q5SRN2 563 aa8.62□□□□□ -1.03
VRK3-216ENST00000599342 C9orf135Q5VTT2 229 aa8.62□□□□□ -1.03
VRK3-216ENST00000599342 WBP2NLQ6ICG8 309 aa8.62□□□□□ -1.03
VRK3-216ENST00000599342 KLHL24Q6TFL4 600 aa8.62□□□□□ -1.03
VRK3-216ENST00000599342 ZNF836Q6ZNA1 936 aa8.62□□□□□ -1.03
VRK3-216ENST00000599342 MSANTD1Q6ZTZ1 278 aa8.62□□□□□ -1.03
VRK3-216ENST00000599342 ABHD12BQ7Z5M8 362 aaPredicted RBP8.62□□□□□ -1.03
VRK3-216ENST00000599342 GPAT4Q86UL3 456 aa8.62□□□□□ -1.03
VRK3-216ENST00000599342 PRIMA1Q86XR5 153 aa8.62□□□□□ -1.03
VRK3-216ENST00000599342 VRK2Q86Y07 508 aa8.62□□□□□ -1.03
VRK3-216ENST00000599342 FBXL14Q8N1E6 418 aa8.62□□□□□ -1.03
VRK3-216ENST00000599342 CADM2Q8N3J6 435 aa8.62□□□□□ -1.03
VRK3-216ENST00000599342 C17orf78Q8N4C9 275 aa8.62□□□□□ -1.03
VRK3-216ENST00000599342 MAPK1IP1LQ8NDC0 245 aa8.62□□□□□ -1.03
VRK3-216ENST00000599342 C1orf162Q8NEQ5 155 aaPredicted RBP8.62□□□□□ -1.03
VRK3-216ENST00000599342 OR52P1PQ8NH57 321 aa8.62□□□□□ -1.03
VRK3-216ENST00000599342 ITCHQ96J02 903 aa8.62□□□□□ -1.03
VRK3-216ENST00000599342 MUS81Q96NY9 551 aa8.62□□□□□ -1.03
VRK3-216ENST00000599342 DHRS9Q9BPW9 319 aa8.62□□□□□ -1.03
VRK3-216ENST00000599342 TAPBPLQ9BX59 468 aa8.62□□□□□ -1.03
VRK3-216ENST00000599342 CACNG6Q9BXT2 260 aa8.62□□□□□ -1.03
VRK3-216ENST00000599342 GRIP2Q9C0E4 1043 aa8.62□□□□□ -1.03
VRK3-216ENST00000599342 MANSC1Q9H8J5 431 aa8.62□□□□□ -1.03
VRK3-216ENST00000599342 TPT1P8Q9HAU6 139 aa8.62□□□□□ -1.03
VRK3-216ENST00000599342 CBLN4Q9NTU7 201 aa8.62□□□□□ -1.03
VRK3-216ENST00000599342 RLIMQ9NVW2 624 aa8.62□□□□□ -1.03
VRK3-216ENST00000599342 ZIM2Q9NZV7 527 aa8.62□□□□□ -1.03
VRK3-216ENST00000599342 DCTN4Q9UJW0 460 aa8.62□□□□□ -1.03
VRK3-216ENST00000599342 GDF2Q9UK05 429 aaPredicted RBP8.62□□□□□ -1.03
VRK3-216ENST00000599342 ZNF443Q9Y2A4 671 aaPredicted RBP8.62□□□□□ -1.03
VRK3-216ENST00000599342 AMDHD2Q9Y303 409 aa8.62□□□□□ -1.03
VRK3-216ENST00000599342 DSPPQ9NZW4 1301 aa8.61□□□□□ -1.03
VRK3-216ENST00000599342 A0A096LPI6 279 aa8.61□□□□□ -1.03
VRK3-216ENST00000599342 FAM234BA2RU67 622 aa8.61□□□□□ -1.03
VRK3-216ENST00000599342 CDHR4A6H8M9 788 aa8.61□□□□□ -1.03
VRK3-216ENST00000599342 UBDO15205 165 aa8.61□□□□□ -1.03
VRK3-216ENST00000599342 SSX4O60224 188 aa8.61□□□□□ -1.03
VRK3-216ENST00000599342 NDUFS7O75251 213 aa8.61□□□□□ -1.03
VRK3-216ENST00000599342 ERLIN1O75477 346 aa8.61□□□□□ -1.03
VRK3-216ENST00000599342 KRT33AO76009 404 aa8.61□□□□□ -1.03
VRK3-216ENST00000599342 AKR7A3O95154 331 aa8.61□□□□□ -1.03
VRK3-216ENST00000599342 CD8AP01732 235 aa8.61□□□□□ -1.03
VRK3-216ENST00000599342 THBS1P07996 1170 aa8.61□□□□□ -1.03
VRK3-216ENST00000599342 ZCCHC18P0CG32 403 aa8.61□□□□□ -1.03
VRK3-216ENST00000599342 MPGP29372 298 aa8.61□□□□□ -1.03
VRK3-216ENST00000599342 TTKP33981 857 aa8.61□□□□□ -1.03
VRK3-216ENST00000599342 NTF4P34130 210 aa8.61□□□□□ -1.03
VRK3-216ENST00000599342 FABP6P51161 128 aa8.61□□□□□ -1.03
VRK3-216ENST00000599342 SLC18A1P54219 525 aa8.61□□□□□ -1.03
VRK3-216ENST00000599342 STX1BP61266 288 aa8.61□□□□□ -1.03
VRK3-216ENST00000599342 MAGOHP61326 146 aaKnown RBP8.61□□□□□ -1.03
VRK3-216ENST00000599342 SLC17A1Q14916 467 aa8.61□□□□□ -1.03
VRK3-216ENST00000599342 GABRA6Q16445 453 aa8.61□□□□□ -1.03
VRK3-216ENST00000599342 ZSWIM7Q19AV6 140 aa8.61□□□□□ -1.03
VRK3-216ENST00000599342 SLC9B1Q4ZJI4 515 aa8.61□□□□□ -1.03
VRK3-216ENST00000599342 RPS26P11Q5JNZ5 115 aaPredicted RBP8.61□□□□□ -1.03
VRK3-216ENST00000599342 TSPO2Q5TGU0 170 aa8.61□□□□□ -1.03
VRK3-216ENST00000599342 RNF220Q5VTB9 566 aa8.61□□□□□ -1.03
VRK3-216ENST00000599342 TMEM225Q6GV28 225 aa8.61□□□□□ -1.03
VRK3-216ENST00000599342 AAED1Q7RTV5 226 aa8.61□□□□□ -1.03
VRK3-216ENST00000599342 MIER2Q8N344 545 aa8.61□□□□□ -1.03
VRK3-216ENST00000599342 MUC15Q8N387 334 aa8.61□□□□□ -1.03
VRK3-216ENST00000599342 POMGNT2Q8NAT1 580 aa8.61□□□□□ -1.03
VRK3-216ENST00000599342 SLC38A5Q8WUX1 472 aa8.61□□□□□ -1.03
VRK3-216ENST00000599342 TMEM45BQ96B21 275 aa8.61□□□□□ -1.03
VRK3-216ENST00000599342 MAELQ96JY0 434 aaKnown RBP8.61□□□□□ -1.03
VRK3-216ENST00000599342 RHNO1Q9BSD3 238 aa8.61□□□□□ -1.03
VRK3-216ENST00000599342 SF3B5Q9BWJ5 86 aaKnown RBP8.61□□□□□ -1.03
VRK3-216ENST00000599342 C1QTNF6Q9BXI9 259 aa8.61□□□□□ -1.03
VRK3-216ENST00000599342 AMBRA1Q9C0C7 1298 aa8.61□□□□□ -1.03
VRK3-216ENST00000599342 ADAM19Q9H013 955 aa8.61□□□□□ -1.03
VRK3-216ENST00000599342 RAD21L1Q9H4I0 556 aa8.61□□□□□ -1.03
VRK3-216ENST00000599342 FKRPQ9H9S5 495 aa8.61□□□□□ -1.03
VRK3-216ENST00000599342 SDR39U1Q9NRG7 319 aaPredicted RBP8.61□□□□□ -1.03
VRK3-216ENST00000599342 SLC7A10Q9NS82 523 aa8.61□□□□□ -1.03
VRK3-216ENST00000599342 SLC6A13Q9NSD5 602 aa8.61□□□□□ -1.03
VRK3-216ENST00000599342 ADPRHL2Q9NX46 363 aa8.61□□□□□ -1.03
VRK3-216ENST00000599342 PRDM4Q9UKN5 801 aa8.61□□□□□ -1.03
VRK3-216ENST00000599342 ZNF232Q9UNY5 417 aa8.61□□□□□ -1.03
VRK3-216ENST00000599342 B3GALT5Q9Y2C3 310 aa8.61□□□□□ -1.03
VRK3-216ENST00000599342 FREM1Q5H8C1 2179 aa8.61□□□□□ -1.03
VRK3-216ENST00000599342 A0A0G2JPF8 293 aa8.6□□□□□ -1.03
VRK3-216ENST00000599342 LIPT2A6NK58 231 aa8.6□□□□□ -1.03
VRK3-216ENST00000599342 AQP7P3A6NL99 342 aa8.6□□□□□ -1.03
VRK3-216ENST00000599342 A8MVM7 634 aa8.6□□□□□ -1.03
VRK3-216ENST00000599342 HNRNPCL2B2RXH8 293 aa8.6□□□□□ -1.03
VRK3-216ENST00000599342 HNRNPCL3B7ZW38 293 aa8.6□□□□□ -1.03
VRK3-216ENST00000599342 E7EQL1 145 aa8.6□□□□□ -1.03
VRK3-216ENST00000599342 PDLIM1O00151 329 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms