RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 KCNS2Q9ULS6 477 aa14.92□□□□□ -0.02
PNKP-210ENST00000597965 YLPM1P49750 1951 aaKnown RBP14.91□□□□□ -0.02
PNKP-210ENST00000597965 A0A1W2PR80 420 aa14.91□□□□□ -0.02
PNKP-210ENST00000597965 HMGB1P1B2RPK0 211 aaPredicted RBP14.91□□□□□ -0.02
PNKP-210ENST00000597965 PDLIM1O00151 329 aa14.91□□□□□ -0.02
PNKP-210ENST00000597965 LMX1BO60663 402 aa14.91□□□□□ -0.02
PNKP-210ENST00000597965 SRD5A1P18405 259 aa14.91□□□□□ -0.02
PNKP-210ENST00000597965 CHI3L1P36222 383 aaPredicted RBP14.91□□□□□ -0.02
PNKP-210ENST00000597965 PDLIM4P50479 330 aa14.91□□□□□ -0.02
PNKP-210ENST00000597965 CLNS1AP54105 237 aaKnown RBP14.91□□□□□ -0.02
PNKP-210ENST00000597965 GYS2P54840 703 aa14.91□□□□□ -0.02
PNKP-210ENST00000597965 MAPK14Q16539 360 aa14.91□□□□□ -0.02
PNKP-210ENST00000597965 KRT71Q3SY84 523 aa14.91□□□□□ -0.02
PNKP-210ENST00000597965 FAM166AQ6J272 317 aa14.91□□□□□ -0.02
PNKP-210ENST00000597965 PAQR6Q6TCH4 344 aa14.91□□□□□ -0.02
PNKP-210ENST00000597965 CCDC103Q8IW40 242 aa14.91□□□□□ -0.02
PNKP-210ENST00000597965 LRRC34Q8IZ02 419 aa14.91□□□□□ -0.02
PNKP-210ENST00000597965 POMGNT2Q8NAT1 580 aa14.91□□□□□ -0.02
PNKP-210ENST00000597965 ZNF540Q8NDQ6 660 aa14.91□□□□□ -0.02
PNKP-210ENST00000597965 TESCQ96BS2 214 aa14.91□□□□□ -0.02
PNKP-210ENST00000597965 SF3B5Q9BWJ5 86 aaKnown RBP14.91□□□□□ -0.02
PNKP-210ENST00000597965 TMED7-TICAM2A0A0A6YYA0 188 aa14.9□□□□□ -0.02
PNKP-210ENST00000597965 CENPVL1A0A0U1RR11 272 aa14.9□□□□□ -0.02
PNKP-210ENST00000597965 FAAHO00519 579 aa14.9□□□□□ -0.02
PNKP-210ENST00000597965 BPGMP07738 259 aa14.9□□□□□ -0.02
PNKP-210ENST00000597965 SLC1A3P43003 542 aa14.9□□□□□ -0.02
PNKP-210ENST00000597965 SNRPD2P62316 118 aaKnown RBP14.9□□□□□ -0.02
PNKP-210ENST00000597965 SAXO2Q658L1 398 aa14.9□□□□□ -0.02
PNKP-210ENST00000597965 TNFAIP8L2Q6P589 184 aaPredicted RBP14.9□□□□□ -0.02
PNKP-210ENST00000597965 B3GLCTQ6Y288 498 aa14.9□□□□□ -0.02
PNKP-210ENST00000597965 FRRS1Q6ZNA5 592 aa14.9□□□□□ -0.02
PNKP-210ENST00000597965 CLEC4FQ8N1N0 589 aa14.9□□□□□ -0.02
PNKP-210ENST00000597965 WDR31Q8NA23 367 aa14.9□□□□□ -0.02
PNKP-210ENST00000597965 OR52E4Q8NGH9 312 aa14.9□□□□□ -0.02
PNKP-210ENST00000597965 TMEM45BQ96B21 275 aa14.9□□□□□ -0.02
PNKP-210ENST00000597965 NEURL3Q96EH8 262 aa14.9□□□□□ -0.02
PNKP-210ENST00000597965 BOD1Q96IK1 185 aa14.9□□□□□ -0.02
PNKP-210ENST00000597965 TRNT1Q96Q11 434 aaKnown RBP14.9□□□□□ -0.02
PNKP-210ENST00000597965 C1QTNF6Q9BXI9 259 aa14.9□□□□□ -0.02
PNKP-210ENST00000597965 OR11A1Q9GZK7 315 aa14.9□□□□□ -0.02
PNKP-210ENST00000597965 MARCOQ9UEW3 520 aaPredicted RBP14.9□□□□□ -0.02
PNKP-210ENST00000597965 LGALS13Q9UHV8 139 aa14.9□□□□□ -0.02
PNKP-210ENST00000597965 TMED7Q9Y3B3 224 aa14.9□□□□□ -0.02
PNKP-210ENST00000597965 FLVCR1Q9Y5Y0 555 aa14.9□□□□□ -0.02
PNKP-210ENST00000597965 OR6C65A6NJZ3 312 aa14.89□□□□□ -0.03
PNKP-210ENST00000597965 SPAG7O75391 227 aa14.89□□□□□ -0.03
PNKP-210ENST00000597965 KRT33AO76009 404 aa14.89□□□□□ -0.03
PNKP-210ENST00000597965 CPSF4O95639 269 aaKnown RBP14.89□□□□□ -0.03
PNKP-210ENST00000597965 GPIP06744 558 aa14.89□□□□□ -0.03
PNKP-210ENST00000597965 IGHV4-31P0DP07 118 aa14.89□□□□□ -0.03
PNKP-210ENST00000597965 NTF4P34130 210 aa14.89□□□□□ -0.03
PNKP-210ENST00000597965 LRRC74AQ0VAA2 488 aa14.89□□□□□ -0.03
PNKP-210ENST00000597965 SLC17A1Q14916 467 aa14.89□□□□□ -0.03
PNKP-210ENST00000597965 GSTA3Q16772 222 aa14.89□□□□□ -0.03
PNKP-210ENST00000597965 TNFAIP8L3Q5GJ75 292 aa14.89□□□□□ -0.03
PNKP-210ENST00000597965 NUDCD3Q8IVD9 361 aa14.89□□□□□ -0.03
PNKP-210ENST00000597965 ZNF440Q8IYI8 595 aa14.89□□□□□ -0.03
PNKP-210ENST00000597965 HTRA1Q92743 480 aa14.89□□□□□ -0.03
PNKP-210ENST00000597965 RAB8BQ92930 207 aa14.89□□□□□ -0.03
PNKP-210ENST00000597965 TLCD1Q96CP7 247 aa14.89□□□□□ -0.03
PNKP-210ENST00000597965 ZNF317Q96PQ6 595 aaPredicted RBP14.89□□□□□ -0.03
PNKP-210ENST00000597965 MTHFD2LQ9H903 347 aaPredicted RBP14.89□□□□□ -0.03
PNKP-210ENST00000597965 SLC7A10Q9NS82 523 aa14.89□□□□□ -0.03
PNKP-210ENST00000597965 LOC390937A0A1W2PQ73 354 aa14.88□□□□□ -0.03
PNKP-210ENST00000597965 AGAP5A6NIR3 686 aa14.88□□□□□ -0.03
PNKP-210ENST00000597965 VSTM5A8MXK1 200 aa14.88□□□□□ -0.03
PNKP-210ENST00000597965 IL7RP16871 459 aa14.88□□□□□ -0.03
PNKP-210ENST00000597965 ZNF16P17020 682 aaPredicted RBP14.88□□□□□ -0.03
PNKP-210ENST00000597965 CCNA2P20248 432 aa14.88□□□□□ -0.03
PNKP-210ENST00000597965 GABPB1Q06547 395 aaPredicted RBP14.88□□□□□ -0.03
PNKP-210ENST00000597965 SQLEQ14534 574 aa14.88□□□□□ -0.03
PNKP-210ENST00000597965 TSPO2Q5TGU0 170 aa14.88□□□□□ -0.03
PNKP-210ENST00000597965 ANKRD46Q86W74 232 aa14.88□□□□□ -0.03
PNKP-210ENST00000597965 SLC35A5Q9BS91 424 aa14.88□□□□□ -0.03
PNKP-210ENST00000597965 AKTIPQ9H8T0 292 aa14.88□□□□□ -0.03
PNKP-210ENST00000597965 TMEM45AQ9NWC5 275 aa14.88□□□□□ -0.03
PNKP-210ENST00000597965 OSGIN1Q9UJX0 560 aa14.88□□□□□ -0.03
PNKP-210ENST00000597965 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.88□□□□□ -0.03
PNKP-210ENST00000597965 CFAP73A6NFT4 308 aa14.87□□□□□ -0.03
PNKP-210ENST00000597965 SCN2BO60939 215 aa14.87□□□□□ -0.03
PNKP-210ENST00000597965 PDE5AO76074 875 aa14.87□□□□□ -0.03
PNKP-210ENST00000597965 VAMP5O95183 116 aa14.87□□□□□ -0.03
PNKP-210ENST00000597965 CRYAAP02489 173 aa14.87□□□□□ -0.03
PNKP-210ENST00000597965 DBIP07108 87 aaKnown RBP14.87□□□□□ -0.03
PNKP-210ENST00000597965 ERCC1P07992 297 aaPredicted RBP14.87□□□□□ -0.03
PNKP-210ENST00000597965 APEHP13798 732 aaKnown RBP14.87□□□□□ -0.03
PNKP-210ENST00000597965 CXCR1P25024 350 aa14.87□□□□□ -0.03
PNKP-210ENST00000597965 TACR3P29371 465 aa14.87□□□□□ -0.03
PNKP-210ENST00000597965 ARRB2P32121 409 aa14.87□□□□□ -0.03
PNKP-210ENST00000597965 NR4A2P43354 598 aa14.87□□□□□ -0.03
PNKP-210ENST00000597965 UBE2NP61088 152 aaKnown RBP14.87□□□□□ -0.03
PNKP-210ENST00000597965 GGTLC2Q14390 218 aa14.87□□□□□ -0.03
PNKP-210ENST00000597965 PDCD2Q16342 344 aaPredicted RBP14.87□□□□□ -0.03
PNKP-210ENST00000597965 SWI5Q1ZZU3 235 aa14.87□□□□□ -0.03
PNKP-210ENST00000597965 OTUD3Q5T2D3 398 aaPredicted RBP14.87□□□□□ -0.03
PNKP-210ENST00000597965 C9orf135Q5VTT2 229 aa14.87□□□□□ -0.03
PNKP-210ENST00000597965 LRRC74BQ6ZQY2 392 aa14.87□□□□□ -0.03
PNKP-210ENST00000597965 OLIG3Q7RTU3 272 aa14.87□□□□□ -0.03
PNKP-210ENST00000597965 AAED1Q7RTV5 226 aa14.87□□□□□ -0.03
PNKP-210ENST00000597965 WDR60Q8WVS4 1066 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms