RNA–Protein interactions for RNA: ENST00000597618.5

TRIM28-210, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-210ENST00000597618 OR1K1Q8NGR3 316 aa8.76□□□□□ -1.01
TRIM28-210ENST00000597618 CLDND2Q8NHS1 167 aa8.76□□□□□ -1.01
TRIM28-210ENST00000597618 CKAP2Q8WWK9 683 aa8.76□□□□□ -1.01
TRIM28-210ENST00000597618 OR5P2Q8WZ92 322 aa8.76□□□□□ -1.01
TRIM28-210ENST00000597618 DDIT4LQ96D03 193 aa8.76□□□□□ -1.01
TRIM28-210ENST00000597618 FAHD2AQ96GK7 314 aa8.76□□□□□ -1.01
TRIM28-210ENST00000597618 ATP6V1HQ9UI12 483 aa8.76□□□□□ -1.01
TRIM28-210ENST00000597618 KCNE5Q9UJ90 142 aa8.76□□□□□ -1.01
TRIM28-210ENST00000597618 PCDHGB4Q9UN71 923 aa8.76□□□□□ -1.01
TRIM28-210ENST00000597618 SLC35A3Q9Y2D2 325 aa8.76□□□□□ -1.01
TRIM28-210ENST00000597618 PTGDR2Q9Y5Y4 395 aa8.76□□□□□ -1.01
TRIM28-210ENST00000597618 CENPVL1A0A0U1RR11 272 aa8.75□□□□□ -1.01
TRIM28-210ENST00000597618 SH3PXD2BA1X283 911 aa8.75□□□□□ -1.01
TRIM28-210ENST00000597618 OR6C65A6NJZ3 312 aa8.75□□□□□ -1.01
TRIM28-210ENST00000597618 DUXAA6NLW8 204 aa8.75□□□□□ -1.01
TRIM28-210ENST00000597618 LYNX1G3V0Z9 82 aa8.75□□□□□ -1.01
TRIM28-210ENST00000597618 ZNF208O43345 1280 aa8.75□□□□□ -1.01
TRIM28-210ENST00000597618 UGT2B17O75795 530 aa8.75□□□□□ -1.01
TRIM28-210ENST00000597618 LGI1O95970 557 aa8.75□□□□□ -1.01
TRIM28-210ENST00000597618 IGKV3-15P01624 115 aa8.75□□□□□ -1.01
TRIM28-210ENST00000597618 LYNX1P0DP58 116 aa8.75□□□□□ -1.01
TRIM28-210ENST00000597618 GAAP10253 952 aa8.75□□□□□ -1.01
TRIM28-210ENST00000597618 MYL2P10916 166 aa8.75□□□□□ -1.01
TRIM28-210ENST00000597618 RYKP34925 604 aa8.75□□□□□ -1.01
TRIM28-210ENST00000597618 PGM1P36871 562 aa8.75□□□□□ -1.01
TRIM28-210ENST00000597618 HTR3AP46098 478 aa8.75□□□□□ -1.01
TRIM28-210ENST00000597618 HGFACQ04756 655 aa8.75□□□□□ -1.01
TRIM28-210ENST00000597618 LSM12Q3MHD2 195 aaKnown RBP8.75□□□□□ -1.01
TRIM28-210ENST00000597618 SLC9B1Q4ZJI4 515 aa8.75□□□□□ -1.01
TRIM28-210ENST00000597618 RFTN2Q52LD8 501 aaPredicted RBP8.75□□□□□ -1.01
TRIM28-210ENST00000597618 CFAP157Q5JU67 520 aa8.75□□□□□ -1.01
TRIM28-210ENST00000597618 CLEC6AQ6EIG7 209 aa8.75□□□□□ -1.01
TRIM28-210ENST00000597618 EMBQ6PCB8 327 aa8.75□□□□□ -1.01
TRIM28-210ENST00000597618 ZYG11AQ6WRX3 759 aa8.75□□□□□ -1.01
TRIM28-210ENST00000597618 RNF165Q6ZSG1 346 aa8.75□□□□□ -1.01
TRIM28-210ENST00000597618 ADGRG3Q86Y34 549 aa8.75□□□□□ -1.01
TRIM28-210ENST00000597618 CDK20Q8IZL9 346 aa8.75□□□□□ -1.01
TRIM28-210ENST00000597618 BPIFB2Q8N4F0 458 aa8.75□□□□□ -1.01
TRIM28-210ENST00000597618 NATD1Q8N6N6 113 aa8.75□□□□□ -1.01
TRIM28-210ENST00000597618 OR9K2Q8NGE7 335 aa8.75□□□□□ -1.01
TRIM28-210ENST00000597618 OR2T11Q8NH01 316 aa8.75□□□□□ -1.01
TRIM28-210ENST00000597618 MAGEE2Q8TD90 523 aaPredicted RBP8.75□□□□□ -1.01
TRIM28-210ENST00000597618 PMM1Q92871 262 aa8.75□□□□□ -1.01
TRIM28-210ENST00000597618 SF3B5Q9BWJ5 86 aaKnown RBP8.75□□□□□ -1.01
TRIM28-210ENST00000597618 ZNF350Q9GZX5 532 aa8.75□□□□□ -1.01
TRIM28-210ENST00000597618 RACGAP1Q9H0H5 632 aa8.75□□□□□ -1.01
TRIM28-210ENST00000597618 TSPYL1Q9H0U9 437 aa8.75□□□□□ -1.01
TRIM28-210ENST00000597618 KCNF1Q9H3M0 494 aa8.75□□□□□ -1.01
TRIM28-210ENST00000597618 TPK1Q9H3S4 243 aa8.75□□□□□ -1.01
TRIM28-210ENST00000597618 PIF1Q9H611 641 aa8.75□□□□□ -1.01
TRIM28-210ENST00000597618 NARFLQ9H6Q4 476 aa8.75□□□□□ -1.01
TRIM28-210ENST00000597618 SEC61A2Q9H9S3 476 aa8.75□□□□□ -1.01
TRIM28-210ENST00000597618 TNFRSF12AQ9NP84 129 aa8.75□□□□□ -1.01
TRIM28-210ENST00000597618 ATAD3AQ9NVI7 634 aa8.75□□□□□ -1.01
TRIM28-210ENST00000597618 MKLN1Q9UL63 735 aa8.75□□□□□ -1.01
TRIM28-210ENST00000597618 LOC105371242A0A075B767 164 aa8.74□□□□□ -1.01
TRIM28-210ENST00000597618 A0A087WUV0 522 aaPredicted RBP8.74□□□□□ -1.01
TRIM28-210ENST00000597618 TMED7-TICAM2A0A0A6YYA0 188 aa8.74□□□□□ -1.01
TRIM28-210ENST00000597618 EXOC1LA0A1B0GW35 172 aa8.74□□□□□ -1.01
TRIM28-210ENST00000597618 TMEM129A0AVI4 362 aa8.74□□□□□ -1.01
TRIM28-210ENST00000597618 TMEM114B3SHH9 223 aa8.74□□□□□ -1.01
TRIM28-210ENST00000597618 M0R233 179 aa8.74□□□□□ -1.01
TRIM28-210ENST00000597618 LSM1O15116 133 aaKnown RBP8.74□□□□□ -1.01
TRIM28-210ENST00000597618 FCMRO60667 390 aa8.74□□□□□ -1.01
TRIM28-210ENST00000597618 SKAP2O75563 359 aaPredicted RBP8.74□□□□□ -1.01
TRIM28-210ENST00000597618 C6orf47O95873 294 aa8.74□□□□□ -1.01
TRIM28-210ENST00000597618 BCL10O95999 233 aa8.74□□□□□ -1.01
TRIM28-210ENST00000597618 CHEK2O96017 543 aa8.74□□□□□ -1.01
TRIM28-210ENST00000597618 IGFBP1P08833 259 aaPredicted RBP8.74□□□□□ -1.01
TRIM28-210ENST00000597618 HKR1P10072 659 aa8.74□□□□□ -1.01
TRIM28-210ENST00000597618 LAMP1P11279 417 aa8.74□□□□□ -1.01
TRIM28-210ENST00000597618 IMPDH2P12268 514 aa8.74□□□□□ -1.01
TRIM28-210ENST00000597618 BCKDHAP12694 445 aa8.74□□□□□ -1.01
TRIM28-210ENST00000597618 HOXB1P14653 301 aaPredicted RBP8.74□□□□□ -1.01
TRIM28-210ENST00000597618 CCNA2P20248 432 aa8.74□□□□□ -1.01
TRIM28-210ENST00000597618 ACHEP22303 614 aa8.74□□□□□ -1.01
TRIM28-210ENST00000597618 MAP2K6P52564 334 aa8.74□□□□□ -1.01
TRIM28-210ENST00000597618 SH3BGRP55822 239 aaPredicted RBP8.74□□□□□ -1.01
TRIM28-210ENST00000597618 UBA52P62987 128 aaKnown RBP8.74□□□□□ -1.01
TRIM28-210ENST00000597618 TUBA1BP68363 451 aa8.74□□□□□ -1.01
TRIM28-210ENST00000597618 TUBA4AP68366 448 aa8.74□□□□□ -1.01
TRIM28-210ENST00000597618 SLC7A5Q01650 507 aa8.74□□□□□ -1.01
TRIM28-210ENST00000597618 ARHGAP11BQ3KRB8 267 aa8.74□□□□□ -1.01
TRIM28-210ENST00000597618 FAM153CQ494X1 144 aa8.74□□□□□ -1.01
TRIM28-210ENST00000597618 ELFN2Q5R3F8 820 aa8.74□□□□□ -1.01
TRIM28-210ENST00000597618 OTUD3Q5T2D3 398 aaPredicted RBP8.74□□□□□ -1.01
TRIM28-210ENST00000597618 LIPMQ5VYY2 423 aa8.74□□□□□ -1.01
TRIM28-210ENST00000597618 REP15Q6BDI9 236 aa8.74□□□□□ -1.01
TRIM28-210ENST00000597618 C8orf74Q6P047 294 aa8.74□□□□□ -1.01
TRIM28-210ENST00000597618 TUBA1AQ71U36 451 aa8.74□□□□□ -1.01
TRIM28-210ENST00000597618 C16orf62Q7Z3J2 963 aa8.74□□□□□ -1.01
TRIM28-210ENST00000597618 C1QL2Q7Z5L3 287 aa8.74□□□□□ -1.01
TRIM28-210ENST00000597618 ZIC4Q8N9L1 334 aa8.74□□□□□ -1.01
TRIM28-210ENST00000597618 OR7A2PQ8NGA2 310 aa8.74□□□□□ -1.01
TRIM28-210ENST00000597618 OR5AK3PQ8NH89 298 aa8.74□□□□□ -1.01
TRIM28-210ENST00000597618 ACMSDQ8TDX5 336 aa8.74□□□□□ -1.01
TRIM28-210ENST00000597618 BCL2L2Q92843 193 aaPredicted RBP8.74□□□□□ -1.01
TRIM28-210ENST00000597618 AURKBQ96GD4 344 aaPredicted RBP8.74□□□□□ -1.01
TRIM28-210ENST00000597618 ZNF385AQ96PM9 386 aaKnown RBP8.74□□□□□ -1.01
TRIM28-210ENST00000597618 ALKBH3Q96Q83 286 aaPredicted RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms