RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 NUDT4Q9NZJ9 180 aa4.12□□□□□ -1.75
SMAD4-216ENST00000593223 ADAM22Q9P0K1 906 aa4.12□□□□□ -1.75
SMAD4-216ENST00000593223 COPS7AQ9UBW8 275 aa4.12□□□□□ -1.75
SMAD4-216ENST00000593223 ADAM28Q9UKQ2 775 aa4.12□□□□□ -1.75
SMAD4-216ENST00000593223 ELF5Q9UKW6 265 aaPredicted RBP4.12□□□□□ -1.75
SMAD4-216ENST00000593223 RHBDD3Q9Y3P4 386 aa4.12□□□□□ -1.75
SMAD4-216ENST00000593223 KLF2Q9Y5W3 355 aaPredicted RBP4.12□□□□□ -1.75
SMAD4-216ENST00000593223 CEMIPQ8WUJ3 1361 aa4.12□□□□□ -1.75
SMAD4-216ENST00000593223 TENM4Q6N022 2769 aa4.12□□□□□ -1.75
SMAD4-216ENST00000593223 HECTD1Q9ULT8 2610 aa4.11□□□□□ -1.75
SMAD4-216ENST00000593223 TMEM89A2RUT3 159 aa4.11□□□□□ -1.75
SMAD4-216ENST00000593223 SNTNA6NMZ2 147 aa4.11□□□□□ -1.75
SMAD4-216ENST00000593223 WASHC1A8K0Z3 465 aa4.11□□□□□ -1.75
SMAD4-216ENST00000593223 C17orf105B2RV13 164 aa4.11□□□□□ -1.75
SMAD4-216ENST00000593223 BCKDKO14874 412 aa4.11□□□□□ -1.75
SMAD4-216ENST00000593223 HAT1O14929 419 aa4.11□□□□□ -1.75
SMAD4-216ENST00000593223 ADAM12O43184 909 aa4.11□□□□□ -1.75
SMAD4-216ENST00000593223 PSMD3O43242 534 aa4.11□□□□□ -1.75
SMAD4-216ENST00000593223 JAK2O60674 1132 aa4.11□□□□□ -1.75
SMAD4-216ENST00000593223 LRP3O75074 770 aa4.11□□□□□ -1.75
SMAD4-216ENST00000593223 MYOGP15173 224 aa4.11□□□□□ -1.75
SMAD4-216ENST00000593223 AADACP22760 399 aa4.11□□□□□ -1.75
SMAD4-216ENST00000593223 OR3A2P47893 321 aa4.11□□□□□ -1.75
SMAD4-216ENST00000593223 SLC7A2P52569 658 aa4.11□□□□□ -1.75
SMAD4-216ENST00000593223 PRPS1P60891 318 aa4.11□□□□□ -1.75
SMAD4-216ENST00000593223 PSMC5P62195 406 aa4.11□□□□□ -1.75
SMAD4-216ENST00000593223 PIGHQ14442 188 aaPredicted RBP4.11□□□□□ -1.75
SMAD4-216ENST00000593223 MTF1Q14872 753 aa4.11□□□□□ -1.75
SMAD4-216ENST00000593223 FASTKD3Q14CZ7 662 aaKnown RBP4.11□□□□□ -1.75
SMAD4-216ENST00000593223 TGFBIQ15582 683 aa4.11□□□□□ -1.75
SMAD4-216ENST00000593223 TAB1Q15750 504 aa4.11□□□□□ -1.75
SMAD4-216ENST00000593223 VAMP3Q15836 100 aa4.11□□□□□ -1.75
SMAD4-216ENST00000593223 UAP1Q16222 522 aaPredicted RBP4.11□□□□□ -1.75
SMAD4-216ENST00000593223 MOGQ16653 247 aa4.11□□□□□ -1.75
SMAD4-216ENST00000593223 C2CD6Q53TS8 623 aa4.11□□□□□ -1.75
SMAD4-216ENST00000593223 GPR157Q5UAW9 335 aa4.11□□□□□ -1.75
SMAD4-216ENST00000593223 THOC7Q6I9Y2 204 aaKnown RBP4.11□□□□□ -1.75
SMAD4-216ENST00000593223 FUT10Q6P4F1 479 aa4.11□□□□□ -1.75
SMAD4-216ENST00000593223 SLC39A4Q6P5W5 647 aa4.11□□□□□ -1.75
SMAD4-216ENST00000593223 PRSS55Q6UWB4 352 aaPredicted RBP4.11□□□□□ -1.75
SMAD4-216ENST00000593223 WASH2PQ6VEQ5 465 aa4.11□□□□□ -1.75
SMAD4-216ENST00000593223 SNX20Q7Z614 316 aa4.11□□□□□ -1.75
SMAD4-216ENST00000593223 SCD5Q86SK9 330 aa4.11□□□□□ -1.75
SMAD4-216ENST00000593223 MYPOPQ86VE0 399 aaPredicted RBP4.11□□□□□ -1.75
SMAD4-216ENST00000593223 RBM45Q8IUH3 476 aaKnown RBP4.11□□□□□ -1.75
SMAD4-216ENST00000593223 CROCCP3Q8IVE0 287 aa4.11□□□□□ -1.75
SMAD4-216ENST00000593223 VSTM4Q8IW00 320 aa4.11□□□□□ -1.75
SMAD4-216ENST00000593223 THEM5Q8N1Q8 247 aa4.11□□□□□ -1.75
SMAD4-216ENST00000593223 GTPBP8Q8N3Z3 284 aaPredicted RBP4.11□□□□□ -1.75
SMAD4-216ENST00000593223 LRRC17Q8N6Y2 441 aa4.11□□□□□ -1.75
SMAD4-216ENST00000593223 PQLC3Q8N755 202 aa4.11□□□□□ -1.75
SMAD4-216ENST00000593223 MAPK1IP1LQ8NDC0 245 aa4.11□□□□□ -1.75
SMAD4-216ENST00000593223 FBXL13Q8NEE6 735 aa4.11□□□□□ -1.75
SMAD4-216ENST00000593223 OR5T3Q8NGG3 340 aa4.11□□□□□ -1.75
SMAD4-216ENST00000593223 CAPSLQ8WWF8 208 aa4.11□□□□□ -1.75
SMAD4-216ENST00000593223 GGHQ92820 318 aa4.11□□□□□ -1.75
SMAD4-216ENST00000593223 PLEKHA8Q96JA3 519 aa4.11□□□□□ -1.75
SMAD4-216ENST00000593223 C2orf48Q96LS8 159 aa4.11□□□□□ -1.75
SMAD4-216ENST00000593223 ZNF300Q96RE9 604 aaPredicted RBP4.11□□□□□ -1.75
SMAD4-216ENST00000593223 OMDQ99983 421 aa4.11□□□□□ -1.75
SMAD4-216ENST00000593223 CNPY3Q9BT09 278 aa4.11□□□□□ -1.75
SMAD4-216ENST00000593223 TM6SF2Q9BZW4 377 aa4.11□□□□□ -1.75
SMAD4-216ENST00000593223 STRADBQ9C0K7 418 aa4.11□□□□□ -1.75
SMAD4-216ENST00000593223 DERL2Q9GZP9 239 aa4.11□□□□□ -1.75
SMAD4-216ENST00000593223 HOXD1Q9GZZ0 328 aa4.11□□□□□ -1.75
SMAD4-216ENST00000593223 WWP1Q9H0M0 922 aa4.11□□□□□ -1.75
SMAD4-216ENST00000593223 POLR3FQ9H1D9 316 aaPredicted RBP4.11□□□□□ -1.75
SMAD4-216ENST00000593223 GOLPH3Q9H4A6 298 aa4.11□□□□□ -1.75
SMAD4-216ENST00000593223 ZDHHC6Q9H6R6 413 aa4.11□□□□□ -1.75
SMAD4-216ENST00000593223 EGLN3Q9H6Z9 239 aa4.11□□□□□ -1.75
SMAD4-216ENST00000593223 CALHM2Q9HA72 323 aa4.11□□□□□ -1.75
SMAD4-216ENST00000593223 RAVER2Q9HCJ3 691 aaKnown RBP4.11□□□□□ -1.75
SMAD4-216ENST00000593223 ZNF302Q9NR11 478 aa4.11□□□□□ -1.75
SMAD4-216ENST00000593223 C20orf96Q9NUD7 363 aaPredicted RBP4.11□□□□□ -1.75
SMAD4-216ENST00000593223 MED17Q9NVC6 651 aa4.11□□□□□ -1.75
SMAD4-216ENST00000593223 PAQR5Q9NXK6 330 aaPredicted RBP4.11□□□□□ -1.75
SMAD4-216ENST00000593223 AHSPQ9NZD4 102 aa4.11□□□□□ -1.75
SMAD4-216ENST00000593223 MTCH1Q9NZJ7 389 aa4.11□□□□□ -1.75
SMAD4-216ENST00000593223 PISDQ9UG56 409 aa4.11□□□□□ -1.75
SMAD4-216ENST00000593223 GGA2Q9UJY4 613 aa4.11□□□□□ -1.75
SMAD4-216ENST00000593223 B9D1Q9UPM9 204 aa4.11□□□□□ -1.75
SMAD4-216ENST00000593223 RASD1Q9Y272 281 aa4.11□□□□□ -1.75
SMAD4-216ENST00000593223 USP16Q9Y5T5 823 aa4.11□□□□□ -1.75
SMAD4-216ENST00000593223 ZHX2Q9Y6X8 837 aa4.11□□□□□ -1.75
SMAD4-216ENST00000593223 MYO18BQ8IUG5 2567 aa4.11□□□□□ -1.75
SMAD4-216ENST00000593223 FRYLO94915 3013 aa4.11□□□□□ -1.75
SMAD4-216ENST00000593223 BRWD1Q9NSI6 2320 aa4.11□□□□□ -1.75
SMAD4-216ENST00000593223 CACNA1FO60840 1977 aa4.11□□□□□ -1.75
SMAD4-216ENST00000593223 LOC105371242A0A075B767 164 aa4.1□□□□□ -1.75
SMAD4-216ENST00000593223 SMCO3A2RU48 225 aa4.1□□□□□ -1.75
SMAD4-216ENST00000593223 OR6C70A6NIJ9 312 aa4.1□□□□□ -1.75
SMAD4-216ENST00000593223 F8VVB4 439 aa4.1□□□□□ -1.75
SMAD4-216ENST00000593223 F8VWA3 439 aa4.1□□□□□ -1.75
SMAD4-216ENST00000593223 GOLGA8RI6L899 631 aa4.1□□□□□ -1.75
SMAD4-216ENST00000593223 PDLIM1O00151 329 aa4.1□□□□□ -1.75
SMAD4-216ENST00000593223 SCN2BO60939 215 aa4.1□□□□□ -1.75
SMAD4-216ENST00000593223 CPNE6O95741 557 aa4.1□□□□□ -1.75
SMAD4-216ENST00000593223 TSPAN12O95859 305 aa4.1□□□□□ -1.75
SMAD4-216ENST00000593223 MOCS2O96007 188 aaPredicted RBP4.1□□□□□ -1.75
SMAD4-216ENST00000593223 NQO2P16083 231 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms