RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 C11orf71Q6IPW1 123 aa16.58■□□□□ 0.24
CCDC43-205ENST00000592333 SLC22A25Q6T423 547 aa16.58■□□□□ 0.24
CCDC43-205ENST00000592333 MSANTD1Q6ZTZ1 278 aa16.58■□□□□ 0.24
CCDC43-205ENST00000592333 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.58■□□□□ 0.24
CCDC43-205ENST00000592333 CCDC103Q8IW40 242 aa16.58■□□□□ 0.24
CCDC43-205ENST00000592333 FBXL14Q8N1E6 418 aa16.58■□□□□ 0.24
CCDC43-205ENST00000592333 POMGNT2Q8NAT1 580 aa16.58■□□□□ 0.24
CCDC43-205ENST00000592333 OR52N5Q8NH56 324 aa16.58■□□□□ 0.24
CCDC43-205ENST00000592333 SPATA3Q8NHX4 192 aa16.58■□□□□ 0.24
CCDC43-205ENST00000592333 FKRPQ9H9S5 495 aa16.58■□□□□ 0.24
CCDC43-205ENST00000592333 UPB1Q9UBR1 384 aa16.58■□□□□ 0.24
CCDC43-205ENST00000592333 DSPPQ9NZW4 1301 aa16.57■□□□□ 0.24
CCDC43-205ENST00000592333 A0A096LPI6 279 aa16.57■□□□□ 0.24
CCDC43-205ENST00000592333 TMEM72A0PK05 275 aa16.57■□□□□ 0.24
CCDC43-205ENST00000592333 CDHR4A6H8M9 788 aa16.57■□□□□ 0.24
CCDC43-205ENST00000592333 H7C417 338 aa16.57■□□□□ 0.24
CCDC43-205ENST00000592333 RFXANKO14593 260 aa16.57■□□□□ 0.24
CCDC43-205ENST00000592333 AP3D1O14617 1153 aa16.57■□□□□ 0.24
CCDC43-205ENST00000592333 VAMP5O95183 116 aa16.57■□□□□ 0.24
CCDC43-205ENST00000592333 IGHV3-9P01782 118 aa16.57■□□□□ 0.24
CCDC43-205ENST00000592333 IMPDH2P12268 514 aa16.57■□□□□ 0.24
CCDC43-205ENST00000592333 IL12AP29459 219 aa16.57■□□□□ 0.24
CCDC43-205ENST00000592333 PDCD4Q53EL6 469 aaKnown RBP16.57■□□□□ 0.24
CCDC43-205ENST00000592333 HHATQ5VTY9 493 aa16.57■□□□□ 0.24
CCDC43-205ENST00000592333 CASP12Q6UXS9 341 aa16.57■□□□□ 0.24
CCDC43-205ENST00000592333 ABHD12BQ7Z5M8 362 aaPredicted RBP16.57■□□□□ 0.24
CCDC43-205ENST00000592333 MUC15Q8N387 334 aa16.57■□□□□ 0.24
CCDC43-205ENST00000592333 OR10H5Q8NGA6 315 aa16.57■□□□□ 0.24
CCDC43-205ENST00000592333 INPP5KQ9BT40 448 aa16.57■□□□□ 0.24
CCDC43-205ENST00000592333 ARMC7Q9H6L4 198 aa16.57■□□□□ 0.24
CCDC43-205ENST00000592333 OBP2BQ9NPH6 170 aa16.57■□□□□ 0.24
CCDC43-205ENST00000592333 P2RX2Q9UBL9 471 aa16.57■□□□□ 0.24
CCDC43-205ENST00000592333 POU2F3Q9UKI9 436 aa16.57■□□□□ 0.24
CCDC43-205ENST00000592333 OR6C65A6NJZ3 312 aa16.56■□□□□ 0.24
CCDC43-205ENST00000592333 E7EQL1 145 aa16.56■□□□□ 0.24
CCDC43-205ENST00000592333 SNNO75324 88 aaPredicted RBP16.56■□□□□ 0.24
CCDC43-205ENST00000592333 CXCR1P25024 350 aa16.56■□□□□ 0.24
CCDC43-205ENST00000592333 MPGP29372 298 aa16.56■□□□□ 0.24
CCDC43-205ENST00000592333 CRISP3P54108 245 aa16.56■□□□□ 0.24
CCDC43-205ENST00000592333 COPZ1P61923 177 aa16.56■□□□□ 0.24
CCDC43-205ENST00000592333 RAB35Q15286 201 aa16.56■□□□□ 0.24
CCDC43-205ENST00000592333 LIN52Q52LA3 116 aa16.56■□□□□ 0.24
CCDC43-205ENST00000592333 RNF220Q5VTB9 566 aa16.56■□□□□ 0.24
CCDC43-205ENST00000592333 ATG16L1Q676U5 607 aa16.56■□□□□ 0.24
CCDC43-205ENST00000592333 WBP2NLQ6ICG8 309 aa16.56■□□□□ 0.24
CCDC43-205ENST00000592333 SLC35B4Q969S0 331 aa16.56■□□□□ 0.24
CCDC43-205ENST00000592333 MAELQ96JY0 434 aaKnown RBP16.56■□□□□ 0.24
CCDC43-205ENST00000592333 ZNF317Q96PQ6 595 aaPredicted RBP16.56■□□□□ 0.24
CCDC43-205ENST00000592333 CENPHQ9H3R5 247 aa16.56■□□□□ 0.24
CCDC43-205ENST00000592333 MOV10Q9HCE1 1003 aaKnown RBP16.56■□□□□ 0.24
CCDC43-205ENST00000592333 SLC17A5Q9NRA2 495 aa16.56■□□□□ 0.24
CCDC43-205ENST00000592333 GDF2Q9UK05 429 aaPredicted RBP16.56■□□□□ 0.24
CCDC43-205ENST00000592333 ADAM21Q9UKJ8 722 aa16.56■□□□□ 0.24
CCDC43-205ENST00000592333 PLCE1Q9P212 2302 aa16.56■□□□□ 0.24
CCDC43-205ENST00000592333 ATRQ13535 2644 aa16.55■□□□□ 0.24
CCDC43-205ENST00000592333 CHD3Q12873 2000 aaKnown RBP16.55■□□□□ 0.24
CCDC43-205ENST00000592333 LIPT2A6NK58 231 aa16.55■□□□□ 0.24
CCDC43-205ENST00000592333 ELOA3DA6NLF2 546 aaPredicted RBP16.55■□□□□ 0.24
CCDC43-205ENST00000592333 SLC22A3O75751 556 aa16.55■□□□□ 0.24
CCDC43-205ENST00000592333 WNT11O96014 354 aa16.55■□□□□ 0.24
CCDC43-205ENST00000592333 CCNA2P20248 432 aa16.55■□□□□ 0.24
CCDC43-205ENST00000592333 CDKN2CP42773 168 aa16.55■□□□□ 0.24
CCDC43-205ENST00000592333 ZNF83P51522 516 aa16.55■□□□□ 0.24
CCDC43-205ENST00000592333 NUDT6P53370 316 aa16.55■□□□□ 0.24
CCDC43-205ENST00000592333 MVDP53602 400 aa16.55■□□□□ 0.24
CCDC43-205ENST00000592333 PRPS1P60891 318 aa16.55■□□□□ 0.24
CCDC43-205ENST00000592333 CHRNB3Q05901 458 aa16.55■□□□□ 0.24
CCDC43-205ENST00000592333 ELOA3BQ3SY89 546 aa16.55■□□□□ 0.24
CCDC43-205ENST00000592333 OTUD3Q5T2D3 398 aaPredicted RBP16.55■□□□□ 0.24
CCDC43-205ENST00000592333 CLEC2AQ6UVW9 174 aa16.55■□□□□ 0.24
CCDC43-205ENST00000592333 HIPK1Q86Z02 1210 aa16.55■□□□□ 0.24
CCDC43-205ENST00000592333 WDR31Q8NA23 367 aa16.55■□□□□ 0.24
CCDC43-205ENST00000592333 ELOA3Q8NG57 546 aa16.55■□□□□ 0.24
CCDC43-205ENST00000592333 OR52P1PQ8NH57 321 aa16.55■□□□□ 0.24
CCDC43-205ENST00000592333 MDFIQ99750 246 aa16.55■□□□□ 0.24
CCDC43-205ENST00000592333 CACNG6Q9BXT2 260 aa16.55■□□□□ 0.24
CCDC43-205ENST00000592333 RMND5AQ9H871 391 aa16.55■□□□□ 0.24
CCDC43-205ENST00000592333 SLC7A10Q9NS82 523 aa16.55■□□□□ 0.24
CCDC43-205ENST00000592333 ZIM2Q9NZV7 527 aa16.55■□□□□ 0.24
CCDC43-205ENST00000592333 ZNF232Q9UNY5 417 aa16.55■□□□□ 0.24
CCDC43-205ENST00000592333 A0A0G2JPF8 293 aa16.54■□□□□ 0.24
CCDC43-205ENST00000592333 TMEM247A6NEH6 219 aa16.54■□□□□ 0.24
CCDC43-205ENST00000592333 AQP7P3A6NL99 342 aa16.54■□□□□ 0.24
CCDC43-205ENST00000592333 A8MVM7 634 aa16.54■□□□□ 0.24
CCDC43-205ENST00000592333 HNRNPCL2B2RXH8 293 aa16.54■□□□□ 0.24
CCDC43-205ENST00000592333 HNRNPCL3B7ZW38 293 aa16.54■□□□□ 0.24
CCDC43-205ENST00000592333 SSX4O60224 188 aa16.54■□□□□ 0.24
CCDC43-205ENST00000592333 HNRNPCL1O60812 293 aaKnown RBP16.54■□□□□ 0.24
CCDC43-205ENST00000592333 NDUFS7O75251 213 aa16.54■□□□□ 0.24
CCDC43-205ENST00000592333 IFNA2P01563 188 aa16.54■□□□□ 0.24
CCDC43-205ENST00000592333 CSF3P09919 207 aa16.54■□□□□ 0.24
CCDC43-205ENST00000592333 TFPTP0C1Z6 253 aa16.54■□□□□ 0.24
CCDC43-205ENST00000592333 HNRNPCL4P0DMR1 293 aa16.54■□□□□ 0.24
CCDC43-205ENST00000592333 SLC25A16P16260 332 aa16.54■□□□□ 0.24
CCDC43-205ENST00000592333 EPHA3P29320 983 aa16.54■□□□□ 0.24
CCDC43-205ENST00000592333 FABP6P51161 128 aa16.54■□□□□ 0.24
CCDC43-205ENST00000592333 NME5P56597 212 aa16.54■□□□□ 0.24
CCDC43-205ENST00000592333 IRX1P78414 480 aaPredicted RBP16.54■□□□□ 0.24
CCDC43-205ENST00000592333 LOXL1Q08397 574 aaPredicted RBP16.54■□□□□ 0.24
CCDC43-205ENST00000592333 LARS2Q15031 903 aaKnown RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms