RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 ZNF19P17023 458 aa14.39□□□□□ -0.11
MBD1-227ENST00000592060 TRAM1Q15629 374 aa14.39□□□□□ -0.11
MBD1-227ENST00000592060 ZNF74Q16587 644 aa14.39□□□□□ -0.11
MBD1-227ENST00000592060 WDR45BQ5MNZ6 344 aa14.39□□□□□ -0.11
MBD1-227ENST00000592060 LCN1P1Q5VSP4 162 aa14.39□□□□□ -0.11
MBD1-227ENST00000592060 DMKNQ6E0U4 476 aaPredicted RBP14.39□□□□□ -0.11
MBD1-227ENST00000592060 KMT5CQ86Y97 462 aa14.39□□□□□ -0.11
MBD1-227ENST00000592060 GPR135Q8IZ08 494 aa14.39□□□□□ -0.11
MBD1-227ENST00000592060 POMGNT2Q8NAT1 580 aa14.39□□□□□ -0.11
MBD1-227ENST00000592060 C17orf47Q8NEP4 570 aa14.39□□□□□ -0.11
MBD1-227ENST00000592060 OR5J2Q8NH18 312 aa14.39□□□□□ -0.11
MBD1-227ENST00000592060 MOSPD2Q8NHP6 518 aa14.39□□□□□ -0.11
MBD1-227ENST00000592060 ZNRF4Q8WWF5 429 aa14.39□□□□□ -0.11
MBD1-227ENST00000592060 HPS1Q92902 700 aa14.39□□□□□ -0.11
MBD1-227ENST00000592060 ZNF501Q96CX3 271 aaPredicted RBP14.39□□□□□ -0.11
MBD1-227ENST00000592060 PPIL3Q9H2H8 161 aaKnown RBP14.39□□□□□ -0.11
MBD1-227ENST00000592060 COMMD3Q9UBI1 195 aa14.39□□□□□ -0.11
MBD1-227ENST00000592060 ST6GALNAC2Q9UJ37 374 aa14.39□□□□□ -0.11
MBD1-227ENST00000592060 ASXL3Q9C0F0 2248 aa14.39□□□□□ -0.11
MBD1-227ENST00000592060 A0A1B0GX78 115 aa14.38□□□□□ -0.11
MBD1-227ENST00000592060 A8MU76 341 aa14.38□□□□□ -0.11
MBD1-227ENST00000592060 HPGDSO60760 199 aa14.38□□□□□ -0.11
MBD1-227ENST00000592060 ICOSLGO75144 302 aa14.38□□□□□ -0.11
MBD1-227ENST00000592060 SC5DO75845 299 aa14.38□□□□□ -0.11
MBD1-227ENST00000592060 F8A1P23610 371 aa14.38□□□□□ -0.11
MBD1-227ENST00000592060 LCN1P31025 176 aa14.38□□□□□ -0.11
MBD1-227ENST00000592060 RPL4P36578 427 aaKnown RBP14.38□□□□□ -0.11
MBD1-227ENST00000592060 CCR4P51679 360 aa14.38□□□□□ -0.11
MBD1-227ENST00000592060 DCAF7P61962 342 aa14.38□□□□□ -0.11
MBD1-227ENST00000592060 VWA2Q5GFL6 755 aa14.38□□□□□ -0.11
MBD1-227ENST00000592060 WDR74Q6RFH5 385 aaPredicted RBP14.38□□□□□ -0.11
MBD1-227ENST00000592060 PRR22Q8IZ63 422 aa14.38□□□□□ -0.11
MBD1-227ENST00000592060 LRRC75AQ8NAA5 344 aa14.38□□□□□ -0.11
MBD1-227ENST00000592060 IL17RDQ8NFM7 739 aa14.38□□□□□ -0.11
MBD1-227ENST00000592060 OR14A16Q8NHC5 309 aa14.38□□□□□ -0.11
MBD1-227ENST00000592060 ZPLD1Q8TCW7 415 aa14.38□□□□□ -0.11
MBD1-227ENST00000592060 RASD2Q96D21 266 aa14.38□□□□□ -0.11
MBD1-227ENST00000592060 GAL3ST4Q96RP7 486 aa14.38□□□□□ -0.11
MBD1-227ENST00000592060 CNN2Q99439 309 aaKnown RBP14.38□□□□□ -0.11
MBD1-227ENST00000592060 RTN4RQ9BZR6 473 aa14.38□□□□□ -0.11
MBD1-227ENST00000592060 LAT2Q9GZY6 243 aa14.38□□□□□ -0.11
MBD1-227ENST00000592060 SACM1LQ9NTJ5 587 aa14.38□□□□□ -0.11
MBD1-227ENST00000592060 MRTO4Q9UKD2 239 aaKnown RBP14.38□□□□□ -0.11
MBD1-227ENST00000592060 HIF3AQ9Y2N7 669 aa14.38□□□□□ -0.11
MBD1-227ENST00000592060 OR6C68A6NDL8 312 aa14.38□□□□□ -0.11
MBD1-227ENST00000592060 IMPA2O14732 288 aa14.38□□□□□ -0.11
MBD1-227ENST00000592060 TO15178 435 aa14.38□□□□□ -0.11
MBD1-227ENST00000592060 IDH3BO43837 385 aa14.38□□□□□ -0.11
MBD1-227ENST00000592060 TSPAN2O60636 221 aa14.38□□□□□ -0.11
MBD1-227ENST00000592060 OR2T7P0C7T2 308 aa14.38□□□□□ -0.11
MBD1-227ENST00000592060 CXCL12P48061 93 aa14.38□□□□□ -0.11
MBD1-227ENST00000592060 DIO1P49895 249 aa14.38□□□□□ -0.11
MBD1-227ENST00000592060 PRPS1P60891 318 aa14.38□□□□□ -0.11
MBD1-227ENST00000592060 ERVK-25P63136 954 aa14.38□□□□□ -0.11
MBD1-227ENST00000592060 EGR4Q05215 589 aa14.38□□□□□ -0.11
MBD1-227ENST00000592060 ASAH1Q13510 395 aa14.38□□□□□ -0.11
MBD1-227ENST00000592060 ARHGAP40Q5TG30 622 aa14.38□□□□□ -0.11
MBD1-227ENST00000592060 YOD1Q5VVQ6 348 aaPredicted RBP14.38□□□□□ -0.11
MBD1-227ENST00000592060 CNIH2Q6PI25 160 aa14.38□□□□□ -0.11
MBD1-227ENST00000592060 RPTNQ6XPR3 784 aa14.38□□□□□ -0.11
MBD1-227ENST00000592060 NRARPQ7Z6K4 114 aa14.38□□□□□ -0.11
MBD1-227ENST00000592060 C7orf57Q8NEG2 295 aa14.38□□□□□ -0.11
MBD1-227ENST00000592060 OR2T27Q8NH04 317 aa14.38□□□□□ -0.11
MBD1-227ENST00000592060 MOGAT1Q96PD6 335 aa14.38□□□□□ -0.11
MBD1-227ENST00000592060 ADOQ96SZ5 270 aa14.38□□□□□ -0.11
MBD1-227ENST00000592060 NMNAT3Q96T66 252 aa14.38□□□□□ -0.11
MBD1-227ENST00000592060 NUDT22Q9BRQ3 303 aa14.38□□□□□ -0.11
MBD1-227ENST00000592060 ZNF768Q9H5H4 540 aaKnown RBP14.38□□□□□ -0.11
MBD1-227ENST00000592060 PPP1R3EQ9H7J1 279 aa14.38□□□□□ -0.11
MBD1-227ENST00000592060 KLHL1Q9NR64 748 aa14.38□□□□□ -0.11
MBD1-227ENST00000592060 TMCC2O75069 709 aa14.37□□□□□ -0.11
MBD1-227ENST00000592060 SPI1P17947 270 aa14.37□□□□□ -0.11
MBD1-227ENST00000592060 EIF2B2P49770 351 aaKnown RBP14.37□□□□□ -0.11
MBD1-227ENST00000592060 HCCSP53701 268 aa14.37□□□□□ -0.11
MBD1-227ENST00000592060 ZP2Q05996 745 aa14.37□□□□□ -0.11
MBD1-227ENST00000592060 SCN1BQ07699 218 aa14.37□□□□□ -0.11
MBD1-227ENST00000592060 SLC3A1Q07837 685 aa14.37□□□□□ -0.11
MBD1-227ENST00000592060 SELENBP1Q13228 472 aa14.37□□□□□ -0.11
MBD1-227ENST00000592060 SLC35D3Q5M8T2 416 aa14.37□□□□□ -0.11
MBD1-227ENST00000592060 C1orf189Q5VU69 101 aa14.37□□□□□ -0.11
MBD1-227ENST00000592060 METAP1DQ6UB28 335 aaPredicted RBP14.37□□□□□ -0.11
MBD1-227ENST00000592060 FAM122BQ7Z309 247 aa14.37□□□□□ -0.11
MBD1-227ENST00000592060 PXKQ7Z7A4 578 aa14.37□□□□□ -0.11
MBD1-227ENST00000592060 SLC35F2Q8IXU6 374 aa14.37□□□□□ -0.11
MBD1-227ENST00000592060 SYS1Q8N2H4 156 aa14.37□□□□□ -0.11
MBD1-227ENST00000592060 OR51L1Q8NGJ5 315 aa14.37□□□□□ -0.11
MBD1-227ENST00000592060 NEDD4LQ96PU5 975 aa14.37□□□□□ -0.11
MBD1-227ENST00000592060 NRSN2Q9GZP1 204 aa14.37□□□□□ -0.11
MBD1-227ENST00000592060 VN1R1Q9GZP7 353 aa14.37□□□□□ -0.11
MBD1-227ENST00000592060 C12orf10Q9HB07 376 aa14.37□□□□□ -0.11
MBD1-227ENST00000592060 MMP25Q9NPA2 562 aa14.37□□□□□ -0.11
MBD1-227ENST00000592060 GRIP1Q9Y3R0 1128 aa14.37□□□□□ -0.11
MBD1-227ENST00000592060 TNRC6BQ9UPQ9 1833 aaKnown RBP14.36□□□□□ -0.11
MBD1-227ENST00000592060 OGG1O15527 345 aa14.36□□□□□ -0.11
MBD1-227ENST00000592060 PTBP1P26599 531 aaKnown RBP eCLIP14.36□□□□□ -0.11
MBD1-227ENST00000592060 SHC1P29353 583 aa14.36□□□□□ -0.11
MBD1-227ENST00000592060 UQCRC1P31930 480 aa14.36□□□□□ -0.11
MBD1-227ENST00000592060 AQP2P41181 271 aa14.36□□□□□ -0.11
MBD1-227ENST00000592060 NAA10P41227 235 aaPredicted RBP14.36□□□□□ -0.11
MBD1-227ENST00000592060 GRK6P43250 576 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms