RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 UBE2J2Q8N2K1 259 aa8.97□□□□□ -0.97
BRCA1-227ENST00000591849 C10orf53Q8N6V4 93 aa8.97□□□□□ -0.97
BRCA1-227ENST00000591849 VANGL1Q8TAA9 524 aaPredicted RBP8.97□□□□□ -0.97
BRCA1-227ENST00000591849 STK35Q8TDR2 534 aa8.97□□□□□ -0.97
BRCA1-227ENST00000591849 DNAJA4Q8WW22 397 aaPredicted RBP8.97□□□□□ -0.97
BRCA1-227ENST00000591849 RASSF5Q8WWW0 418 aa8.97□□□□□ -0.97
BRCA1-227ENST00000591849 PROX1Q92786 737 aa8.97□□□□□ -0.97
BRCA1-227ENST00000591849 C3orf49Q96BT1 292 aa8.97□□□□□ -0.97
BRCA1-227ENST00000591849 SLC25A36Q96CQ1 311 aa8.97□□□□□ -0.97
BRCA1-227ENST00000591849 SLC47A1Q96FL8 570 aa8.97□□□□□ -0.97
BRCA1-227ENST00000591849 MCHR1Q99705 422 aa8.97□□□□□ -0.97
BRCA1-227ENST00000591849 GPATCH1Q9BRR8 931 aaKnown RBP8.97□□□□□ -0.97
BRCA1-227ENST00000591849 ADPRHL2Q9NX46 363 aa8.97□□□□□ -0.97
BRCA1-227ENST00000591849 TESQ9UGI8 421 aaKnown RBP8.97□□□□□ -0.97
BRCA1-227ENST00000591849 CHST2Q9Y4C5 530 aa8.97□□□□□ -0.97
BRCA1-227ENST00000591849 FBN2P35556 2912 aa8.97□□□□□ -0.97
BRCA1-227ENST00000591849 MED13LQ71F56 2210 aa8.96□□□□□ -0.97
BRCA1-227ENST00000591849 ZC3H12DA2A288 527 aaKnown RBP8.96□□□□□ -0.98
BRCA1-227ENST00000591849 A6NNC1 897 aa8.96□□□□□ -0.98
BRCA1-227ENST00000591849 ZNF724A8MTY0 619 aa8.96□□□□□ -0.98
BRCA1-227ENST00000591849 NDUFAB1O14561 156 aa8.96□□□□□ -0.98
BRCA1-227ENST00000591849 SNX3O60493 162 aa8.96□□□□□ -0.98
BRCA1-227ENST00000591849 MRPL33O75394 65 aaKnown RBP8.96□□□□□ -0.98
BRCA1-227ENST00000591849 AKR7A3O95154 331 aa8.96□□□□□ -0.98
BRCA1-227ENST00000591849 LGI1O95970 557 aa8.96□□□□□ -0.98
BRCA1-227ENST00000591849 C8BP07358 591 aa8.96□□□□□ -0.98
BRCA1-227ENST00000591849 PNMTP11086 282 aa8.96□□□□□ -0.98
BRCA1-227ENST00000591849 IMPDH2P12268 514 aa8.96□□□□□ -0.98
BRCA1-227ENST00000591849 PPP3CBP16298 524 aa8.96□□□□□ -0.98
BRCA1-227ENST00000591849 NUDT2P50583 147 aa8.96□□□□□ -0.98
BRCA1-227ENST00000591849 PCBP3P57721 371 aaKnown RBP8.96□□□□□ -0.98
BRCA1-227ENST00000591849 IL1RL1Q01638 556 aa8.96□□□□□ -0.98
BRCA1-227ENST00000591849 DMTNQ08495 405 aa8.96□□□□□ -0.98
BRCA1-227ENST00000591849 DAZAP2Q15038 168 aaPredicted RBP8.96□□□□□ -0.98
BRCA1-227ENST00000591849 PDK3Q15120 406 aa8.96□□□□□ -0.98
BRCA1-227ENST00000591849 OR1Q1Q15612 314 aa8.96□□□□□ -0.98
BRCA1-227ENST00000591849 GLIPR1L2Q4G1C9 344 aa8.96□□□□□ -0.98
BRCA1-227ENST00000591849 ALG10BQ5I7T1 473 aa8.96□□□□□ -0.98
BRCA1-227ENST00000591849 OTUD3Q5T2D3 398 aaPredicted RBP8.96□□□□□ -0.98
BRCA1-227ENST00000591849 ULK3Q6PHR2 472 aa8.96□□□□□ -0.98
BRCA1-227ENST00000591849 ATG4DQ86TL0 474 aaPredicted RBP8.96□□□□□ -0.98
BRCA1-227ENST00000591849 GPAT4Q86UL3 456 aa8.96□□□□□ -0.98
BRCA1-227ENST00000591849 CCDC103Q8IW40 242 aa8.96□□□□□ -0.98
BRCA1-227ENST00000591849 STEAP2Q8NFT2 490 aa8.96□□□□□ -0.98
BRCA1-227ENST00000591849 OR2T12Q8NG77 320 aa8.96□□□□□ -0.98
BRCA1-227ENST00000591849 SLC38A4Q969I6 547 aa8.96□□□□□ -0.98
BRCA1-227ENST00000591849 WFIKKN1Q96NZ8 548 aa8.96□□□□□ -0.98
BRCA1-227ENST00000591849 ZNF300Q96RE9 604 aaPredicted RBP8.96□□□□□ -0.98
BRCA1-227ENST00000591849 EPYCQ99645 322 aa8.96□□□□□ -0.98
BRCA1-227ENST00000591849 HOPXQ9BPY8 73 aaPredicted RBP8.96□□□□□ -0.98
BRCA1-227ENST00000591849 PSD2Q9BQI7 771 aa8.96□□□□□ -0.98
BRCA1-227ENST00000591849 PRR14Q9BWN1 585 aa8.96□□□□□ -0.98
BRCA1-227ENST00000591849 HDHD5Q9BXW7 423 aa8.96□□□□□ -0.98
BRCA1-227ENST00000591849 CLEC4MQ9H2X3 399 aaPredicted RBP8.96□□□□□ -0.98
BRCA1-227ENST00000591849 BCO1Q9HAY6 547 aa8.96□□□□□ -0.98
BRCA1-227ENST00000591849 PARPBPQ9NWS1 579 aa8.96□□□□□ -0.98
BRCA1-227ENST00000591849 ITGB1BP2Q9UKP3 347 aa8.96□□□□□ -0.98
BRCA1-227ENST00000591849 BAG5Q9UL15 447 aa8.96□□□□□ -0.98
BRCA1-227ENST00000591849 SLC9A8Q9Y2E8 581 aa8.96□□□□□ -0.98
BRCA1-227ENST00000591849 GPR52Q9Y2T5 361 aa8.96□□□□□ -0.98
BRCA1-227ENST00000591849 TACC2O95359 2948 aa8.96□□□□□ -0.98
BRCA1-227ENST00000591849 ARHGAP21Q5T5U3 1957 aa8.95□□□□□ -0.98
BRCA1-227ENST00000591849 KIAA1549Q9HCM3 1950 aa8.95□□□□□ -0.98
BRCA1-227ENST00000591849 DOCK7Q96N67 2140 aa8.95□□□□□ -0.98
BRCA1-227ENST00000591849 CIB4A0PJX0 185 aa8.95□□□□□ -0.98
BRCA1-227ENST00000591849 ELOVL7A1L3X0 281 aa8.95□□□□□ -0.98
BRCA1-227ENST00000591849 LIPT2A6NK58 231 aa8.95□□□□□ -0.98
BRCA1-227ENST00000591849 CCT8L1PA6NM43 557 aa8.95□□□□□ -0.98
BRCA1-227ENST00000591849 FAM220BPB1ANY3 271 aa8.95□□□□□ -0.98
BRCA1-227ENST00000591849 M0R3H8 397 aa8.95□□□□□ -0.98
BRCA1-227ENST00000591849 OR2T1O43869 369 aa8.95□□□□□ -0.98
BRCA1-227ENST00000591849 GMNNO75496 209 aa8.95□□□□□ -0.98
BRCA1-227ENST00000591849 CTAG2O75638 210 aa8.95□□□□□ -0.98
BRCA1-227ENST00000591849 DCTN3O75935 186 aa8.95□□□□□ -0.98
BRCA1-227ENST00000591849 KRT33AO76009 404 aa8.95□□□□□ -0.98
BRCA1-227ENST00000591849 ADAP00813 363 aa8.95□□□□□ -0.98
BRCA1-227ENST00000591849 KLK2P20151 261 aa8.95□□□□□ -0.98
BRCA1-227ENST00000591849 CD247P20963 164 aa8.95□□□□□ -0.98
BRCA1-227ENST00000591849 PRDX6P30041 224 aa8.95□□□□□ -0.98
BRCA1-227ENST00000591849 IFNA8P32881 189 aa8.95□□□□□ -0.98
BRCA1-227ENST00000591849 RPS5P46782 204 aaKnown RBP8.95□□□□□ -0.98
BRCA1-227ENST00000591849 OR3A2P47893 321 aa8.95□□□□□ -0.98
BRCA1-227ENST00000591849 PCYT1AP49585 367 aa8.95□□□□□ -0.98
BRCA1-227ENST00000591849 GZMMP51124 257 aa8.95□□□□□ -0.98
BRCA1-227ENST00000591849 LIPEQ05469 1076 aa8.95□□□□□ -0.98
BRCA1-227ENST00000591849 VEZF1Q14119 521 aa8.95□□□□□ -0.98
BRCA1-227ENST00000591849 POU4F3Q15319 338 aa8.95□□□□□ -0.98
BRCA1-227ENST00000591849 DUSP7Q16829 419 aa8.95□□□□□ -0.98
BRCA1-227ENST00000591849 LRRC23Q53EV4 343 aaPredicted RBP8.95□□□□□ -0.98
BRCA1-227ENST00000591849 FAM91A1Q658Y4 838 aa8.95□□□□□ -0.98
BRCA1-227ENST00000591849 ABLIM2Q6H8Q1 611 aa8.95□□□□□ -0.98
BRCA1-227ENST00000591849 PAQR6Q6TCH4 344 aa8.95□□□□□ -0.98
BRCA1-227ENST00000591849 C5orf46Q6UWT4 87 aa8.95□□□□□ -0.98
BRCA1-227ENST00000591849 CASP12Q6UXS9 341 aa8.95□□□□□ -0.98
BRCA1-227ENST00000591849 TFAP2EQ6VUC0 442 aa8.95□□□□□ -0.98
BRCA1-227ENST00000591849 CCDC80Q76M96 950 aa8.95□□□□□ -0.98
BRCA1-227ENST00000591849 CXorf67Q86X51 503 aaPredicted RBP8.95□□□□□ -0.98
BRCA1-227ENST00000591849 CALHM3Q86XJ0 350 aa8.95□□□□□ -0.98
BRCA1-227ENST00000591849 WFDC8Q8IUA0 241 aa8.95□□□□□ -0.98
BRCA1-227ENST00000591849 MICU2Q8IYU8 434 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms