RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 MED18Q9BUE0 208 aa16.05■□□□□ 0.16
VAT1-208ENST00000590924 GSX1Q9H4S2 264 aaPredicted RBP16.05■□□□□ 0.16
VAT1-208ENST00000590924 GORASP2Q9H8Y8 452 aa16.05■□□□□ 0.16
VAT1-208ENST00000590924 ACER3Q9NUN7 267 aa16.05■□□□□ 0.16
VAT1-208ENST00000590924 C6orf203Q9P0P8 240 aaPredicted RBP16.05■□□□□ 0.16
VAT1-208ENST00000590924 STOML1Q9UBI4 398 aa16.05■□□□□ 0.16
VAT1-208ENST00000590924 NTN1O95631 604 aa16.04■□□□□ 0.16
VAT1-208ENST00000590924 PRKCAP17252 672 aa16.04■□□□□ 0.16
VAT1-208ENST00000590924 CD247P20963 164 aa16.04■□□□□ 0.16
VAT1-208ENST00000590924 ACAA2P42765 397 aaKnown RBP16.04■□□□□ 0.16
VAT1-208ENST00000590924 CCR4P51679 360 aa16.04■□□□□ 0.16
VAT1-208ENST00000590924 SELENOWP63302 87 aa16.04■□□□□ 0.16
VAT1-208ENST00000590924 QPRTQ15274 297 aa16.04■□□□□ 0.16
VAT1-208ENST00000590924 SHEQ5VZ18 495 aa16.04■□□□□ 0.16
VAT1-208ENST00000590924 GLYATQ6IB77 296 aa16.04■□□□□ 0.16
VAT1-208ENST00000590924 FAM214BQ7L5A3 538 aa16.04■□□□□ 0.16
VAT1-208ENST00000590924 RNF148Q8N7C7 305 aa16.04■□□□□ 0.16
VAT1-208ENST00000590924 OR52E4Q8NGH9 312 aa16.04■□□□□ 0.16
VAT1-208ENST00000590924 LZICQ8WZA0 190 aa16.04■□□□□ 0.16
VAT1-208ENST00000590924 MUC13Q9H3R2 512 aa16.04■□□□□ 0.16
VAT1-208ENST00000590924 GMPR2Q9P2T1 348 aaKnown RBP16.04■□□□□ 0.16
VAT1-208ENST00000590924 MAGEL2Q9UJ55 1249 aa16.04■□□□□ 0.16
VAT1-208ENST00000590924 VDAC3Q9Y277 283 aa16.04■□□□□ 0.16
VAT1-208ENST00000590924 C16orf97H3BN30 126 aa16.03■□□□□ 0.16
VAT1-208ENST00000590924 GMFGO60234 142 aa16.03■□□□□ 0.16
VAT1-208ENST00000590924 AQP8O94778 261 aa16.03■□□□□ 0.16
VAT1-208ENST00000590924 FESP07332 822 aa16.03■□□□□ 0.16
VAT1-208ENST00000590924 ME2P23368 584 aa16.03■□□□□ 0.16
VAT1-208ENST00000590924 PSMA4P25789 261 aaKnown RBP16.03■□□□□ 0.16
VAT1-208ENST00000590924 FKBP2P26885 142 aaKnown RBP16.03■□□□□ 0.16
VAT1-208ENST00000590924 ELK4P28324 431 aa16.03■□□□□ 0.16
VAT1-208ENST00000590924 HTR3AP46098 478 aa16.03■□□□□ 0.16
VAT1-208ENST00000590924 MAP2K6P52564 334 aa16.03■□□□□ 0.16
VAT1-208ENST00000590924 NKX6-1P78426 367 aaPredicted RBP16.03■□□□□ 0.16
VAT1-208ENST00000590924 SGCBQ16585 318 aa16.03■□□□□ 0.16
VAT1-208ENST00000590924 NRF1Q16656 503 aa16.03■□□□□ 0.16
VAT1-208ENST00000590924 CYBRD1Q53TN4 286 aa16.03■□□□□ 0.16
VAT1-208ENST00000590924 BIVMQ86UB2 503 aa16.03■□□□□ 0.16
VAT1-208ENST00000590924 ZNF610Q8N9Z0 462 aa16.03■□□□□ 0.16
VAT1-208ENST00000590924 SMYD1Q8NB12 490 aa16.03■□□□□ 0.16
VAT1-208ENST00000590924 GPR32P1Q8NGA4 272 aa16.03■□□□□ 0.16
VAT1-208ENST00000590924 PROX1Q92786 737 aa16.03■□□□□ 0.16
VAT1-208ENST00000590924 PIP5K1AQ99755 562 aa16.03■□□□□ 0.16
VAT1-208ENST00000590924 ARHGDIGQ99819 225 aa16.03■□□□□ 0.16
VAT1-208ENST00000590924 ADPRHL2Q9NX46 363 aa16.03■□□□□ 0.16
VAT1-208ENST00000590924 PROCRQ9UNN8 238 aa16.03■□□□□ 0.16
VAT1-208ENST00000590924 NSD1Q96L73 2696 aaPredicted RBP16.02■□□□□ 0.16
VAT1-208ENST00000590924 SHISA8B8ZZ34 492 aa16.02■□□□□ 0.16
VAT1-208ENST00000590924 FMO6PO60774 539 aa16.02■□□□□ 0.16
VAT1-208ENST00000590924 ADAM11O75078 769 aa16.02■□□□□ 0.16
VAT1-208ENST00000590924 DNAJC8O75937 253 aaPredicted RBP16.02■□□□□ 0.16
VAT1-208ENST00000590924 OPN1SWP03999 348 aa16.02■□□□□ 0.16
VAT1-208ENST00000590924 RYKP34925 604 aa16.02■□□□□ 0.16
VAT1-208ENST00000590924 APOBEC1P41238 236 aaKnown RBP16.02■□□□□ 0.16
VAT1-208ENST00000590924 SLC1A3P43003 542 aa16.02■□□□□ 0.16
VAT1-208ENST00000590924 IDH2P48735 452 aaKnown RBP16.02■□□□□ 0.16
VAT1-208ENST00000590924 SESN3P58005 492 aa16.02■□□□□ 0.16
VAT1-208ENST00000590924 COPZ1P61923 177 aa16.02■□□□□ 0.16
VAT1-208ENST00000590924 TOMM34Q15785 309 aaPredicted RBP16.02■□□□□ 0.16
VAT1-208ENST00000590924 GLIPR1L2Q4G1C9 344 aa16.02■□□□□ 0.16
VAT1-208ENST00000590924 WBP2NLQ6ICG8 309 aa16.02■□□□□ 0.16
VAT1-208ENST00000590924 CCDC121Q6ZUS5 278 aa16.02■□□□□ 0.16
VAT1-208ENST00000590924 CBLL1Q75N03 491 aa16.02■□□□□ 0.16
VAT1-208ENST00000590924 LRRC75A-AS1Q8N1F1 130 aa16.02■□□□□ 0.16
VAT1-208ENST00000590924 LSMEM1Q8N8F7 131 aa16.02■□□□□ 0.16
VAT1-208ENST00000590924 ZNF563Q8TA94 476 aa16.02■□□□□ 0.16
VAT1-208ENST00000590924 POC1BQ8TC44 478 aa16.02■□□□□ 0.16
VAT1-208ENST00000590924 POP5Q969H6 163 aaKnown RBP16.02■□□□□ 0.16
VAT1-208ENST00000590924 PIGTQ969N2 578 aa16.02■□□□□ 0.16
VAT1-208ENST00000590924 C18orf12Q96KH6 178 aa16.02■□□□□ 0.16
VAT1-208ENST00000590924 KLHDC3Q9BQ90 382 aa16.02■□□□□ 0.16
VAT1-208ENST00000590924 THTPAQ9BU02 230 aa16.02■□□□□ 0.16
VAT1-208ENST00000590924 ADAM19Q9H013 955 aa16.02■□□□□ 0.16
VAT1-208ENST00000590924 MMADHCQ9H3L0 296 aaPredicted RBP16.02■□□□□ 0.16
VAT1-208ENST00000590924 PAQR5Q9NXK6 330 aaPredicted RBP16.02■□□□□ 0.16
VAT1-208ENST00000590924 EGFL7Q9UHF1 273 aa16.02■□□□□ 0.16
VAT1-208ENST00000590924 RPS6KA6Q9UK32 745 aa16.02■□□□□ 0.16
VAT1-208ENST00000590924 SLC9A8Q9Y2E8 581 aa16.02■□□□□ 0.16
VAT1-208ENST00000590924 SNX13Q9Y5W8 968 aa16.02■□□□□ 0.16
VAT1-208ENST00000590924 TMEM229AB2RXF0 380 aa16.01■□□□□ 0.15
VAT1-208ENST00000590924 EIF1AYO14602 144 aaKnown RBP16.01■□□□□ 0.15
VAT1-208ENST00000590924 AP3D1O14617 1153 aa16.01■□□□□ 0.15
VAT1-208ENST00000590924 GSC2O15499 205 aa16.01■□□□□ 0.15
VAT1-208ENST00000590924 GKN3PP0CG01 181 aa16.01■□□□□ 0.15
VAT1-208ENST00000590924 TCN1P20061 433 aaPredicted RBP16.01■□□□□ 0.15
VAT1-208ENST00000590924 EIF1AXP47813 144 aaKnown RBP16.01■□□□□ 0.15
VAT1-208ENST00000590924 RAC1P63000 192 aa16.01■□□□□ 0.15
VAT1-208ENST00000590924 TRIM25Q14258 630 aaKnown RBP16.01■□□□□ 0.15
VAT1-208ENST00000590924 CTU2Q2VPK5 515 aaKnown RBP16.01■□□□□ 0.15
VAT1-208ENST00000590924 LRRC23Q53EV4 343 aaPredicted RBP16.01■□□□□ 0.15
VAT1-208ENST00000590924 PGM2L1Q6PCE3 622 aa16.01■□□□□ 0.15
VAT1-208ENST00000590924 GRINAQ7Z429 371 aa16.01■□□□□ 0.15
VAT1-208ENST00000590924 RANBP3LQ86VV4 465 aaPredicted RBP16.01■□□□□ 0.15
VAT1-208ENST00000590924 FAM156AQ8NDB6 213 aa16.01■□□□□ 0.15
VAT1-208ENST00000590924 OR6K3Q8NGY3 331 aa16.01■□□□□ 0.15
VAT1-208ENST00000590924 FAM162AQ96A26 154 aa16.01■□□□□ 0.15
VAT1-208ENST00000590924 PIK3IP1Q96FE7 263 aa16.01■□□□□ 0.15
VAT1-208ENST00000590924 GMPPAQ96IJ6 420 aaPredicted RBP16.01■□□□□ 0.15
VAT1-208ENST00000590924 ADGRG7Q96K78 797 aa16.01■□□□□ 0.15
VAT1-208ENST00000590924 TRIM2Q9C040 744 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms