RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 ANKRD46Q86W74 232 aa10.33□□□□□ -0.76
BRCA1-225ENST00000586385 TMEM99Q8N816 258 aa10.33□□□□□ -0.76
BRCA1-225ENST00000586385 XAGE5Q8WWM1 108 aa10.33□□□□□ -0.76
BRCA1-225ENST00000586385 OIT3Q8WWZ8 545 aa10.33□□□□□ -0.76
BRCA1-225ENST00000586385 ANP32BQ92688 251 aaKnown RBP10.33□□□□□ -0.76
BRCA1-225ENST00000586385 PRPF18Q99633 342 aaKnown RBP10.33□□□□□ -0.76
BRCA1-225ENST00000586385 RHOXF2Q9BQY4 288 aa10.33□□□□□ -0.76
BRCA1-225ENST00000586385 NELFAQ9H3P2 528 aa10.33□□□□□ -0.76
BRCA1-225ENST00000586385 PLK3Q9H4B4 646 aa10.33□□□□□ -0.76
BRCA1-225ENST00000586385 POLE3Q9NRF9 147 aa10.33□□□□□ -0.76
BRCA1-225ENST00000586385 CA10Q9NS85 328 aa10.33□□□□□ -0.76
BRCA1-225ENST00000586385 ASIC5Q9NY37 505 aa10.33□□□□□ -0.76
BRCA1-225ENST00000586385 UPB1Q9UBR1 384 aa10.33□□□□□ -0.76
BRCA1-225ENST00000586385 MID2Q9UJV3 735 aa10.33□□□□□ -0.76
BRCA1-225ENST00000586385 FKBP7Q9Y680 259 aa10.33□□□□□ -0.76
BRCA1-225ENST00000586385 NR5A2O00482 541 aa10.32□□□□□ -0.76
BRCA1-225ENST00000586385 ZNF208O43345 1280 aa10.32□□□□□ -0.76
BRCA1-225ENST00000586385 AKR7A3O95154 331 aa10.32□□□□□ -0.76
BRCA1-225ENST00000586385 STAMBPO95630 424 aa10.32□□□□□ -0.76
BRCA1-225ENST00000586385 LGI1O95970 557 aa10.32□□□□□ -0.76
BRCA1-225ENST00000586385 TACSTD2P09758 323 aa10.32□□□□□ -0.76
BRCA1-225ENST00000586385 ITGA2P17301 1181 aa10.32□□□□□ -0.76
BRCA1-225ENST00000586385 CDH2P19022 906 aaPredicted RBP10.32□□□□□ -0.76
BRCA1-225ENST00000586385 FKBP2P26885 142 aaKnown RBP10.32□□□□□ -0.76
BRCA1-225ENST00000586385 GIFP27352 417 aa10.32□□□□□ -0.76
BRCA1-225ENST00000586385 TACR3P29371 465 aa10.32□□□□□ -0.76
BRCA1-225ENST00000586385 SNRPD2P62316 118 aaKnown RBP10.32□□□□□ -0.76
BRCA1-225ENST00000586385 TUBA1BP68363 451 aa10.32□□□□□ -0.76
BRCA1-225ENST00000586385 TUBA4AP68366 448 aa10.32□□□□□ -0.76
BRCA1-225ENST00000586385 NAAAQ02083 359 aa10.32□□□□□ -0.76
BRCA1-225ENST00000586385 TGFBR3Q03167 851 aa10.32□□□□□ -0.76
BRCA1-225ENST00000586385 HGFACQ04756 655 aa10.32□□□□□ -0.76
BRCA1-225ENST00000586385 SQLEQ14534 574 aa10.32□□□□□ -0.76
BRCA1-225ENST00000586385 EFNB3Q15768 340 aa10.32□□□□□ -0.76
BRCA1-225ENST00000586385 TBRG1Q3YBR2 411 aa10.32□□□□□ -0.76
BRCA1-225ENST00000586385 C1QTNF12Q5T7M4 302 aa10.32□□□□□ -0.76
BRCA1-225ENST00000586385 TUBA1AQ71U36 451 aa10.32□□□□□ -0.76
BRCA1-225ENST00000586385 SLC46A3Q7Z3Q1 461 aa10.32□□□□□ -0.76
BRCA1-225ENST00000586385 SPATA19Q7Z5L4 167 aa10.32□□□□□ -0.76
BRCA1-225ENST00000586385 MEX3DQ86XN8 651 aaKnown RBP10.32□□□□□ -0.76
BRCA1-225ENST00000586385 ZCCHC24Q8N2G6 241 aaKnown RBP10.32□□□□□ -0.76
BRCA1-225ENST00000586385 ARFGAP2Q8N6H7 521 aa10.32□□□□□ -0.76
BRCA1-225ENST00000586385 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.32□□□□□ -0.76
BRCA1-225ENST00000586385 ANKFN1Q8N957 763 aa10.32□□□□□ -0.76
BRCA1-225ENST00000586385 OR9K2Q8NGE7 335 aa10.32□□□□□ -0.76
BRCA1-225ENST00000586385 OR4A15Q8NGL6 344 aa10.32□□□□□ -0.76
BRCA1-225ENST00000586385 OR1K1Q8NGR3 316 aa10.32□□□□□ -0.76
BRCA1-225ENST00000586385 BCL2L2Q92843 193 aaPredicted RBP10.32□□□□□ -0.76
BRCA1-225ENST00000586385 TUBGCP3Q96CW5 907 aa10.32□□□□□ -0.76
BRCA1-225ENST00000586385 APOPT1Q96IL0 206 aa10.32□□□□□ -0.76
BRCA1-225ENST00000586385 SLC38A2Q96QD8 506 aa10.32□□□□□ -0.76
BRCA1-225ENST00000586385 VRK1Q99986 396 aaPredicted RBP10.32□□□□□ -0.76
BRCA1-225ENST00000586385 SLC38A1Q9H2H9 487 aa10.32□□□□□ -0.76
BRCA1-225ENST00000586385 EXD2Q9NVH0 621 aa10.32□□□□□ -0.76
BRCA1-225ENST00000586385 PARPBPQ9NWS1 579 aa10.32□□□□□ -0.76
BRCA1-225ENST00000586385 CRNNQ9UBG3 495 aaPredicted RBP10.32□□□□□ -0.76
BRCA1-225ENST00000586385 PCDHGB4Q9UN71 923 aa10.32□□□□□ -0.76
BRCA1-225ENST00000586385 HEATR1Q9H583 2144 aaKnown RBP10.31□□□□□ -0.76
BRCA1-225ENST00000586385 TMEM129A0AVI4 362 aa10.31□□□□□ -0.76
BRCA1-225ENST00000586385 ZNF503-AS2A6NEH8 195 aa10.31□□□□□ -0.76
BRCA1-225ENST00000586385 AGAP5A6NIR3 686 aa10.31□□□□□ -0.76
BRCA1-225ENST00000586385 LIPT2A6NK58 231 aa10.31□□□□□ -0.76
BRCA1-225ENST00000586385 AQP7P3A6NL99 342 aa10.31□□□□□ -0.76
BRCA1-225ENST00000586385 B9A039 149 aa10.31□□□□□ -0.76
BRCA1-225ENST00000586385 HMGN4O00479 90 aa10.31□□□□□ -0.76
BRCA1-225ENST00000586385 EIF1BO60739 113 aaKnown RBP10.31□□□□□ -0.76
BRCA1-225ENST00000586385 WNT11O96014 354 aa10.31□□□□□ -0.76
BRCA1-225ENST00000586385 IGLV1-44P01699 117 aa10.31□□□□□ -0.76
BRCA1-225ENST00000586385 CHRM4P08173 479 aa10.31□□□□□ -0.76
BRCA1-225ENST00000586385 CELA3BP08861 270 aa10.31□□□□□ -0.76
BRCA1-225ENST00000586385 OR4A8P0C604 315 aa10.31□□□□□ -0.76
BRCA1-225ENST00000586385 CECR9P0C854 216 aa10.31□□□□□ -0.76
BRCA1-225ENST00000586385 HNF1AP20823 631 aa10.31□□□□□ -0.76
BRCA1-225ENST00000586385 RPS4Y1P22090 263 aaKnown RBP10.31□□□□□ -0.76
BRCA1-225ENST00000586385 SELENOPP49908 381 aa10.31□□□□□ -0.76
BRCA1-225ENST00000586385 PPOXP50336 477 aa10.31□□□□□ -0.76
BRCA1-225ENST00000586385 POLR2HP52434 150 aaKnown RBP10.31□□□□□ -0.76
BRCA1-225ENST00000586385 EMX2Q04743 252 aa10.31□□□□□ -0.76
BRCA1-225ENST00000586385 RUNX1T1Q06455 604 aa10.31□□□□□ -0.76
BRCA1-225ENST00000586385 MAPK11Q15759 364 aa10.31□□□□□ -0.76
BRCA1-225ENST00000586385 IQCCQ4KMZ1 466 aa10.31□□□□□ -0.76
BRCA1-225ENST00000586385 OTUD3Q5T2D3 398 aaPredicted RBP10.31□□□□□ -0.76
BRCA1-225ENST00000586385 LIPNQ5VXI9 398 aa10.31□□□□□ -0.76
BRCA1-225ENST00000586385 ANKRD16Q6P6B7 361 aa10.31□□□□□ -0.76
BRCA1-225ENST00000586385 AAED1Q7RTV5 226 aa10.31□□□□□ -0.76
BRCA1-225ENST00000586385 RFLNBQ8N5W9 214 aa10.31□□□□□ -0.76
BRCA1-225ENST00000586385 OR8J2Q8NGG1 315 aa10.31□□□□□ -0.76
BRCA1-225ENST00000586385 NEURL3Q96EH8 262 aa10.31□□□□□ -0.76
BRCA1-225ENST00000586385 AURKBQ96GD4 344 aaPredicted RBP10.31□□□□□ -0.76
BRCA1-225ENST00000586385 KATNB1Q9BVA0 655 aa10.31□□□□□ -0.76
BRCA1-225ENST00000586385 PLA2G12AQ9BZM1 189 aa10.31□□□□□ -0.76
BRCA1-225ENST00000586385 ADAM19Q9H013 955 aa10.31□□□□□ -0.76
BRCA1-225ENST00000586385 MYOZ1Q9NP98 299 aaPredicted RBP10.31□□□□□ -0.76
BRCA1-225ENST00000586385 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.31□□□□□ -0.76
BRCA1-225ENST00000586385 TENM1Q9UKZ4 2725 aa10.31□□□□□ -0.76
BRCA1-225ENST00000586385 ARPC4-TTLL3A0A0A6YYG9 625 aa10.3□□□□□ -0.76
BRCA1-225ENST00000586385 FAAHO00519 579 aa10.3□□□□□ -0.76
BRCA1-225ENST00000586385 TCF21O43680 179 aa10.3□□□□□ -0.76
BRCA1-225ENST00000586385 SPAG7O75391 227 aa10.3□□□□□ -0.76
BRCA1-225ENST00000586385 UPK3AO75631 287 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms