RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 CTBP2P56545 445 aa16.47■□□□□ 0.23
RFFL-211ENST00000584541 CLDN18P56856 261 aa16.47■□□□□ 0.23
RFFL-211ENST00000584541 CLDN20P56880 219 aa16.47■□□□□ 0.23
RFFL-211ENST00000584541 CSNK2A1P68400 391 aaPredicted RBP16.47■□□□□ 0.23
RFFL-211ENST00000584541 PRKCDQ05655 676 aa16.47■□□□□ 0.23
RFFL-211ENST00000584541 RBPJQ06330 500 aa16.47■□□□□ 0.23
RFFL-211ENST00000584541 MYBPHQ13203 477 aa16.47■□□□□ 0.23
RFFL-211ENST00000584541 RIPK1Q13546 671 aa16.47■□□□□ 0.23
RFFL-211ENST00000584541 MFSD13AQ14CX5 517 aa16.47■□□□□ 0.23
RFFL-211ENST00000584541 SEC23BQ15437 767 aa16.47■□□□□ 0.23
RFFL-211ENST00000584541 FAM69AQ5T7M9 428 aa16.47■□□□□ 0.23
RFFL-211ENST00000584541 HBMQ6B0K9 141 aa16.47■□□□□ 0.23
RFFL-211ENST00000584541 GFRALQ6UXV0 394 aa16.47■□□□□ 0.23
RFFL-211ENST00000584541 GGNQ86UU5 652 aa16.47■□□□□ 0.23
RFFL-211ENST00000584541 OR10G2Q8NGC3 310 aa16.47■□□□□ 0.23
RFFL-211ENST00000584541 OR6S1Q8NH40 331 aa16.47■□□□□ 0.23
RFFL-211ENST00000584541 OR2V1Q8NHB1 315 aa16.47■□□□□ 0.23
RFFL-211ENST00000584541 RELTQ969Z4 430 aa16.47■□□□□ 0.23
RFFL-211ENST00000584541 BPIFA2Q96DR5 249 aa16.47■□□□□ 0.23
RFFL-211ENST00000584541 KTI12Q96EK9 354 aaPredicted RBP16.47■□□□□ 0.23
RFFL-211ENST00000584541 SGTBQ96EQ0 304 aa16.47■□□□□ 0.23
RFFL-211ENST00000584541 ARL5BQ96KC2 179 aa16.47■□□□□ 0.23
RFFL-211ENST00000584541 RNPEPL1Q9HAU8 725 aa16.47■□□□□ 0.23
RFFL-211ENST00000584541 MEPEQ9NQ76 525 aaPredicted RBP16.47■□□□□ 0.23
RFFL-211ENST00000584541 PAQR5Q9NXK6 330 aaPredicted RBP16.47■□□□□ 0.23
RFFL-211ENST00000584541 PDP1Q9P0J1 537 aaPredicted RBP16.47■□□□□ 0.23
RFFL-211ENST00000584541 TRAPPC4Q9Y296 219 aa16.47■□□□□ 0.23
RFFL-211ENST00000584541 MED12Q93074 2177 aa16.46■□□□□ 0.23
RFFL-211ENST00000584541 A0A0J9YW62 118 aa16.46■□□□□ 0.23
RFFL-211ENST00000584541 ARRDC5A6NEK1 342 aa16.46■□□□□ 0.23
RFFL-211ENST00000584541 PIP5K1CO60331 668 aa16.46■□□□□ 0.23
RFFL-211ENST00000584541 WISP2O76076 250 aa16.46■□□□□ 0.23
RFFL-211ENST00000584541 PMS2P2O95744 297 aa16.46■□□□□ 0.23
RFFL-211ENST00000584541 MT-ATP6P00846 226 aa16.46■□□□□ 0.23
RFFL-211ENST00000584541 ABOP16442 354 aa16.46■□□□□ 0.23
RFFL-211ENST00000584541 EIF1AXP47813 144 aaKnown RBP16.46■□□□□ 0.23
RFFL-211ENST00000584541 DIO1P49895 249 aa16.46■□□□□ 0.23
RFFL-211ENST00000584541 CARD18P57730 90 aa16.46■□□□□ 0.23
RFFL-211ENST00000584541 NUP107P57740 925 aa16.46■□□□□ 0.23
RFFL-211ENST00000584541 OR2B6P58173 313 aa16.46■□□□□ 0.23
RFFL-211ENST00000584541 SLC35A1P78382 337 aa16.46■□□□□ 0.23
RFFL-211ENST00000584541 SGCBQ16585 318 aa16.46■□□□□ 0.23
RFFL-211ENST00000584541 TMPPEQ6ZT21 453 aa16.46■□□□□ 0.23
RFFL-211ENST00000584541 PRICKLE2Q7Z3G6 844 aa16.46■□□□□ 0.23
RFFL-211ENST00000584541 TMEM179BQ7Z7N9 219 aa16.46■□□□□ 0.23
RFFL-211ENST00000584541 MFSD8Q8NHS3 518 aa16.46■□□□□ 0.23
RFFL-211ENST00000584541 TAAR8Q969N4 342 aa16.46■□□□□ 0.23
RFFL-211ENST00000584541 MIB2Q96AX9 1013 aa16.46■□□□□ 0.23
RFFL-211ENST00000584541 SLC25A36Q96CQ1 311 aa16.46■□□□□ 0.23
RFFL-211ENST00000584541 ZHX1-C8orf76Q96EF9 292 aa16.46■□□□□ 0.23
RFFL-211ENST00000584541 DNAJA3Q96EY1 480 aa16.46■□□□□ 0.23
RFFL-211ENST00000584541 WDYHV1Q96HA8 205 aa16.46■□□□□ 0.23
RFFL-211ENST00000584541 TNFRSF10DQ9UBN6 386 aa16.46■□□□□ 0.23
RFFL-211ENST00000584541 SAC3D1A6NKF1 404 aa16.45■□□□□ 0.22
RFFL-211ENST00000584541 CH25HO95992 272 aa16.45■□□□□ 0.22
RFFL-211ENST00000584541 HIST1H2ABP04908 130 aa16.45■□□□□ 0.22
RFFL-211ENST00000584541 SAGP10523 405 aaPredicted RBP16.45■□□□□ 0.22
RFFL-211ENST00000584541 IMPDH2P12268 514 aa16.45■□□□□ 0.22
RFFL-211ENST00000584541 SUCLG1P53597 346 aaKnown RBP16.45■□□□□ 0.22
RFFL-211ENST00000584541 LAPTM4AQ15012 233 aa16.45■□□□□ 0.22
RFFL-211ENST00000584541 SF3B4Q15427 424 aaKnown RBP eCLIP16.45■□□□□ 0.22
RFFL-211ENST00000584541 OR7A5Q15622 319 aa16.45■□□□□ 0.22
RFFL-211ENST00000584541 ZNF74Q16587 644 aa16.45■□□□□ 0.22
RFFL-211ENST00000584541 CTU2Q2VPK5 515 aaKnown RBP16.45■□□□□ 0.22
RFFL-211ENST00000584541 C1QL3Q5VWW1 255 aa16.45■□□□□ 0.22
RFFL-211ENST00000584541 HIST3H2AQ7L7L0 130 aa16.45■□□□□ 0.22
RFFL-211ENST00000584541 MAMDC2Q7Z304 686 aaPredicted RBP16.45■□□□□ 0.22
RFFL-211ENST00000584541 STK32CQ86UX6 486 aa16.45■□□□□ 0.22
RFFL-211ENST00000584541 AQP11Q8NBQ7 271 aa16.45■□□□□ 0.22
RFFL-211ENST00000584541 OR9Q2Q8NGE9 314 aa16.45■□□□□ 0.22
RFFL-211ENST00000584541 OR10D3Q8NH80 312 aa16.45■□□□□ 0.22
RFFL-211ENST00000584541 GNPDA2Q8TDQ7 276 aa16.45■□□□□ 0.22
RFFL-211ENST00000584541 HIST1H2ACQ93077 130 aa16.45■□□□□ 0.22
RFFL-211ENST00000584541 FAM46AQ96IP4 442 aaKnown RBP16.45■□□□□ 0.22
RFFL-211ENST00000584541 C9orf16Q9BUW7 83 aa16.45■□□□□ 0.22
RFFL-211ENST00000584541 PTDSS2Q9BVG9 487 aa16.45■□□□□ 0.22
RFFL-211ENST00000584541 ASPNQ9BXN1 380 aa16.45■□□□□ 0.22
RFFL-211ENST00000584541 PRDM14Q9GZV8 571 aa16.45■□□□□ 0.22
RFFL-211ENST00000584541 FKRPQ9H9S5 495 aa16.45■□□□□ 0.22
RFFL-211ENST00000584541 ZNF556Q9HAH1 456 aa16.45■□□□□ 0.22
RFFL-211ENST00000584541 NANSQ9NR45 359 aa16.45■□□□□ 0.22
RFFL-211ENST00000584541 C20orf141Q9NUB4 165 aa16.45■□□□□ 0.22
RFFL-211ENST00000584541 KIF17Q9P2E2 1029 aa16.45■□□□□ 0.22
RFFL-211ENST00000584541 OAZ3Q9UMX2 235 aa16.45■□□□□ 0.22
RFFL-211ENST00000584541 MGAT4BQ9UQ53 548 aa16.45■□□□□ 0.22
RFFL-211ENST00000584541 GTF3C1Q12789 2109 aa16.45■□□□□ 0.22
RFFL-211ENST00000584541 LIPT2A6NK58 231 aa16.44■□□□□ 0.22
RFFL-211ENST00000584541 EFCAB9A8MZ26 197 aa16.44■□□□□ 0.22
RFFL-211ENST00000584541 DNPH1O43598 174 aa16.44■□□□□ 0.22
RFFL-211ENST00000584541 OR7A10O76100 309 aa16.44■□□□□ 0.22
RFFL-211ENST00000584541 SYNGR4O95473 234 aa16.44■□□□□ 0.22
RFFL-211ENST00000584541 ATP6V1G2O95670 118 aa16.44■□□□□ 0.22
RFFL-211ENST00000584541 BGLAPP02818 100 aa16.44■□□□□ 0.22
RFFL-211ENST00000584541 TPOP07202 933 aa16.44■□□□□ 0.22
RFFL-211ENST00000584541 ANXA8P13928 327 aa16.44■□□□□ 0.22
RFFL-211ENST00000584541 GPR4P46093 362 aa16.44■□□□□ 0.22
RFFL-211ENST00000584541 OMPP47874 163 aa16.44■□□□□ 0.22
RFFL-211ENST00000584541 CLDN15P56746 228 aa16.44■□□□□ 0.22
RFFL-211ENST00000584541 RAC3P60763 192 aa16.44■□□□□ 0.22
RFFL-211ENST00000584541 LSM11P83369 360 aaKnown RBP eCLIP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms