RNA–Protein interactions for RNA: ENST00000583441.1

SMCHD1-209, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 657 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-209ENST00000583441 KLLNB2CW77 178 aa2.66□□□□□ -1.98
SMCHD1-209ENST00000583441 H0Y8G0 127 aa2.66□□□□□ -1.98
SMCHD1-209ENST00000583441 NBR2O15453 112 aa2.66□□□□□ -1.98
SMCHD1-209ENST00000583441 ZNF264O43296 627 aa2.66□□□□□ -1.98
SMCHD1-209ENST00000583441 TIMM8AO60220 97 aaPredicted RBP2.66□□□□□ -1.98
SMCHD1-209ENST00000583441 FCMRO60667 390 aa2.66□□□□□ -1.98
SMCHD1-209ENST00000583441 ZBTB25P24278 435 aa2.66□□□□□ -1.98
SMCHD1-209ENST00000583441 HMGB2P26583 209 aaKnown RBP2.66□□□□□ -1.98
SMCHD1-209ENST00000583441 MAGEA8P43361 318 aa2.66□□□□□ -1.98
SMCHD1-209ENST00000583441 QARSP47897 775 aaKnown RBP2.66□□□□□ -1.98
SMCHD1-209ENST00000583441 SULT1E1P49888 294 aa2.66□□□□□ -1.98
SMCHD1-209ENST00000583441 TIMM10P62072 90 aa2.66□□□□□ -1.98
SMCHD1-209ENST00000583441 RPS8P62241 208 aaKnown RBP2.66□□□□□ -1.98
SMCHD1-209ENST00000583441 OGDHQ02218 1023 aa2.66□□□□□ -1.98
SMCHD1-209ENST00000583441 ORC2Q13416 577 aaPredicted RBP2.66□□□□□ -1.98
SMCHD1-209ENST00000583441 ARFRP1Q13795 201 aa2.66□□□□□ -1.98
SMCHD1-209ENST00000583441 PARP15Q460N3 678 aa2.66□□□□□ -1.98
SMCHD1-209ENST00000583441 PDZK1Q5T2W1 519 aa2.66□□□□□ -1.98
SMCHD1-209ENST00000583441 C1orf146Q5VVC0 180 aa2.66□□□□□ -1.98
SMCHD1-209ENST00000583441 KRTAP5-7Q6L8G8 165 aa2.66□□□□□ -1.98
SMCHD1-209ENST00000583441 NBPF5PQ86XG9 351 aaPredicted RBP2.66□□□□□ -1.98
SMCHD1-209ENST00000583441 FTMTQ8N4E7 242 aa2.66□□□□□ -1.98
SMCHD1-209ENST00000583441 C11orf42Q8N5U0 333 aa2.66□□□□□ -1.98
SMCHD1-209ENST00000583441 CATSPER1Q8NEC5 780 aa2.66□□□□□ -1.98
SMCHD1-209ENST00000583441 OR51S1Q8NGJ8 323 aa2.66□□□□□ -1.98
SMCHD1-209ENST00000583441 LINC01006Q8NI28 216 aa2.66□□□□□ -1.98
SMCHD1-209ENST00000583441 C16orf74Q96GX8 76 aa2.66□□□□□ -1.98
SMCHD1-209ENST00000583441 TBX15Q96SF7 602 aa2.66□□□□□ -1.98
SMCHD1-209ENST00000583441 NPY6RQ99463 290 aa2.66□□□□□ -1.98
SMCHD1-209ENST00000583441 GCOM2Q9BZD3 368 aaPredicted RBP2.66□□□□□ -1.98
SMCHD1-209ENST00000583441 RBKSQ9H477 322 aa2.66□□□□□ -1.98
SMCHD1-209ENST00000583441 YY1AP1Q9H869 796 aa2.66□□□□□ -1.98
SMCHD1-209ENST00000583441 FOLH1BQ9HBA9 442 aa2.66□□□□□ -1.98
SMCHD1-209ENST00000583441 HPCAL4Q9UM19 191 aa2.66□□□□□ -1.98
SMCHD1-209ENST00000583441 ABCA7Q8IZY2 2146 aa2.66□□□□□ -1.98
SMCHD1-209ENST00000583441 RALGAPA1Q6GYQ0 2036 aa2.65□□□□□ -1.99
SMCHD1-209ENST00000583441 OR52A4PA6NMU1 304 aa2.65□□□□□ -1.99
SMCHD1-209ENST00000583441 LOC110117498-PIK3R3F6TDL0 507 aa2.65□□□□□ -1.99
SMCHD1-209ENST00000583441 DCTN6O00399 190 aa2.65□□□□□ -1.99
SMCHD1-209ENST00000583441 MMP23AO75900 390 aa2.65□□□□□ -1.99
SMCHD1-209ENST00000583441 RPS2P15880 293 aaKnown RBP2.65□□□□□ -1.99
SMCHD1-209ENST00000583441 MX1P20591 662 aa2.65□□□□□ -1.99
SMCHD1-209ENST00000583441 CMA1P23946 247 aa2.65□□□□□ -1.99
SMCHD1-209ENST00000583441 SHMT2P34897 504 aa2.65□□□□□ -1.99
SMCHD1-209ENST00000583441 ATP1B3P54709 279 aa2.65□□□□□ -1.99
SMCHD1-209ENST00000583441 ATP5IP56385 69 aaPredicted RBP2.65□□□□□ -1.99
SMCHD1-209ENST00000583441 TLE4Q04727 773 aa2.65□□□□□ -1.99
SMCHD1-209ENST00000583441 LRRC74AQ0VAA2 488 aa2.65□□□□□ -1.99
SMCHD1-209ENST00000583441 VGLL4Q14135 290 aa2.65□□□□□ -1.99
SMCHD1-209ENST00000583441 MICBQ29980 383 aa2.65□□□□□ -1.99
SMCHD1-209ENST00000583441 PHYHD1Q5SRE7 291 aa2.65□□□□□ -1.99
SMCHD1-209ENST00000583441 OR52E8Q6IFG1 317 aa2.65□□□□□ -1.99
SMCHD1-209ENST00000583441 PGAP1Q75T13 922 aa2.65□□□□□ -1.99
SMCHD1-209ENST00000583441 H2BFWTQ7Z2G1 175 aa2.65□□□□□ -1.99
SMCHD1-209ENST00000583441 NECAB1Q8N987 351 aa2.65□□□□□ -1.99
SMCHD1-209ENST00000583441 ZNF564Q8TBZ8 553 aaPredicted RBP2.65□□□□□ -1.99
SMCHD1-209ENST00000583441 MAGEE2Q8TD90 523 aaPredicted RBP2.65□□□□□ -1.99
SMCHD1-209ENST00000583441 SCFD1Q8WVM8 642 aa2.65□□□□□ -1.99
SMCHD1-209ENST00000583441 MARC2Q969Z3 335 aa2.65□□□□□ -1.99
SMCHD1-209ENST00000583441 C10orf35Q96D05 121 aa2.65□□□□□ -1.99
SMCHD1-209ENST00000583441 PAGE5Q96GU1 130 aa2.65□□□□□ -1.99
SMCHD1-209ENST00000583441 IFT74Q96LB3 600 aa2.65□□□□□ -1.99
SMCHD1-209ENST00000583441 RNF2Q99496 336 aa2.65□□□□□ -1.99
SMCHD1-209ENST00000583441 ARHGDIGQ99819 225 aa2.65□□□□□ -1.99
SMCHD1-209ENST00000583441 RIOK1Q9BRS2 568 aaKnown RBP2.65□□□□□ -1.99
SMCHD1-209ENST00000583441 SUDS3Q9H7L9 328 aaPredicted RBP2.65□□□□□ -1.99
SMCHD1-209ENST00000583441 HYPKQ9NX55 129 aa2.65□□□□□ -1.99
SMCHD1-209ENST00000583441 TREM2Q9NZC2 230 aa2.65□□□□□ -1.99
SMCHD1-209ENST00000583441 ADAM22Q9P0K1 906 aa2.65□□□□□ -1.99
SMCHD1-209ENST00000583441 SEC14L3Q9UDX4 400 aa2.65□□□□□ -1.99
SMCHD1-209ENST00000583441 NAP1L2Q9ULW6 460 aaPredicted RBP2.65□□□□□ -1.99
SMCHD1-209ENST00000583441 ASF1AQ9Y294 204 aa2.65□□□□□ -1.99
SMCHD1-209ENST00000583441 UGT2A1Q9Y4X1 527 aa2.65□□□□□ -1.99
SMCHD1-209ENST00000583441 ASB3Q9Y575 518 aa2.65□□□□□ -1.99
SMCHD1-209ENST00000583441 NPTNQ9Y639 398 aa2.65□□□□□ -1.99
SMCHD1-209ENST00000583441 V9GY05 133 aa2.65□□□□□ -1.99
SMCHD1-209ENST00000583441 TTC21BQ7Z4L5 1316 aa2.65□□□□□ -1.99
SMCHD1-209ENST00000583441 ZNF780AO75290 641 aaPredicted RBP2.64□□□□□ -1.99
SMCHD1-209ENST00000583441 LGI1O95970 557 aa2.64□□□□□ -1.99
SMCHD1-209ENST00000583441 IGHDP01880 384 aa2.64□□□□□ -1.99
SMCHD1-209ENST00000583441 NCF2P19878 526 aaPredicted RBP2.64□□□□□ -1.99
SMCHD1-209ENST00000583441 PCMT1P22061 227 aa2.64□□□□□ -1.99
SMCHD1-209ENST00000583441 KIR2DS4P43632 304 aa2.64□□□□□ -1.99
SMCHD1-209ENST00000583441 KPNA2P52292 529 aaKnown RBP2.64□□□□□ -1.99
SMCHD1-209ENST00000583441 BIDP55957 195 aa2.64□□□□□ -1.99
SMCHD1-209ENST00000583441 STX17P56962 302 aa2.64□□□□□ -1.99
SMCHD1-209ENST00000583441 SEC61GP60059 68 aa2.64□□□□□ -1.99
SMCHD1-209ENST00000583441 SELENOTP62341 195 aa2.64□□□□□ -1.99
SMCHD1-209ENST00000583441 CSNK1G2P78368 415 aa2.64□□□□□ -1.99
SMCHD1-209ENST00000583441 GRB7Q14451 532 aa2.64□□□□□ -1.99
SMCHD1-209ENST00000583441 OXA1LQ15070 435 aa2.64□□□□□ -1.99
SMCHD1-209ENST00000583441 SSX2Q16385 188 aa2.64□□□□□ -1.99
SMCHD1-209ENST00000583441 NSUN5P1Q3KNT7 163 aa2.64□□□□□ -1.99
SMCHD1-209ENST00000583441 MAJINQ3KP22 176 aa2.64□□□□□ -1.99
SMCHD1-209ENST00000583441 RNF212Q495C1 297 aa2.64□□□□□ -1.99
SMCHD1-209ENST00000583441 CTSL3PQ5NE16 218 aa2.64□□□□□ -1.99
SMCHD1-209ENST00000583441 NANOGNBQ7Z5D8 188 aa2.64□□□□□ -1.99
SMCHD1-209ENST00000583441 NUDCD3Q8IVD9 361 aa2.64□□□□□ -1.99
SMCHD1-209ENST00000583441 RDH10Q8IZV5 341 aa2.64□□□□□ -1.99
SMCHD1-209ENST00000583441 OR10G3Q8NGC4 313 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms