RNA–Protein interactions for RNA: ENST00000580556.5

CCDC84-209, Transcript of coiled-coil domain containing 84, humanhuman

TSL 3

Gene CCDC84, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-209ENST00000580556 KLHL15Q96M94 604 aa10.91□□□□□ -0.66
CCDC84-209ENST00000580556 HS6ST2Q96MM7 605 aa10.91□□□□□ -0.66
CCDC84-209ENST00000580556 TIMP4Q99727 224 aa10.91□□□□□ -0.66
CCDC84-209ENST00000580556 PRSS27Q9BQR3 290 aa10.91□□□□□ -0.66
CCDC84-209ENST00000580556 POTEKPQ9BYX7 375 aa10.91□□□□□ -0.66
CCDC84-209ENST00000580556 EXO5Q9H790 373 aa10.91□□□□□ -0.66
CCDC84-209ENST00000580556 MAN2C1Q9NTJ4 1040 aa10.91□□□□□ -0.66
CCDC84-209ENST00000580556 SLC7A7Q9UM01 511 aa10.91□□□□□ -0.66
CCDC84-209ENST00000580556 SLC6A5Q9Y345 797 aa10.91□□□□□ -0.66
CCDC84-209ENST00000580556 HDGFL3Q9Y3E1 203 aa10.91□□□□□ -0.66
CCDC84-209ENST00000580556 AP4S1Q9Y587 144 aa10.91□□□□□ -0.66
CCDC84-209ENST00000580556 NCOA6Q14686 2063 aaPredicted RBP10.91□□□□□ -0.66
CCDC84-209ENST00000580556 IGKV1D-42A0A075B6H8 117 aa10.9□□□□□ -0.66
CCDC84-209ENST00000580556 A0A1B0GTH9 108 aa10.9□□□□□ -0.66
CCDC84-209ENST00000580556 TMEM72A0PK05 275 aa10.9□□□□□ -0.66
CCDC84-209ENST00000580556 H3BML4 177 aa10.9□□□□□ -0.66
CCDC84-209ENST00000580556 DNPH1O43598 174 aa10.9□□□□□ -0.66
CCDC84-209ENST00000580556 FZD7O75084 574 aa10.9□□□□□ -0.66
CCDC84-209ENST00000580556 IL11P20809 199 aa10.9□□□□□ -0.66
CCDC84-209ENST00000580556 TCEA1P23193 301 aaKnown RBP10.9□□□□□ -0.66
CCDC84-209ENST00000580556 PTGS2P35354 604 aa10.9□□□□□ -0.66
CCDC84-209ENST00000580556 CA7P43166 264 aa10.9□□□□□ -0.66
CCDC84-209ENST00000580556 YAP1P46937 504 aaKnown RBP10.9□□□□□ -0.66
CCDC84-209ENST00000580556 HMGA2P52926 109 aa10.9□□□□□ -0.66
CCDC84-209ENST00000580556 TLE4Q04727 773 aa10.9□□□□□ -0.66
CCDC84-209ENST00000580556 DCST1Q5T197 706 aa10.9□□□□□ -0.66
CCDC84-209ENST00000580556 OR2T5Q6IEZ7 315 aa10.9□□□□□ -0.66
CCDC84-209ENST00000580556 ESPNLQ6ZVH7 1005 aa10.9□□□□□ -0.66
CCDC84-209ENST00000580556 FGD2Q7Z6J4 655 aa10.9□□□□□ -0.66
CCDC84-209ENST00000580556 MEIOBQ8N635 442 aa10.9□□□□□ -0.66
CCDC84-209ENST00000580556 OR2T29Q8NH02 315 aa10.9□□□□□ -0.66
CCDC84-209ENST00000580556 OR6S1Q8NH40 331 aa10.9□□□□□ -0.66
CCDC84-209ENST00000580556 ADGRG7Q96K78 797 aa10.9□□□□□ -0.66
CCDC84-209ENST00000580556 EPYCQ99645 322 aa10.9□□□□□ -0.66
CCDC84-209ENST00000580556 FUZQ9BT04 418 aa10.9□□□□□ -0.66
CCDC84-209ENST00000580556 PAQR5Q9NXK6 330 aaPredicted RBP10.9□□□□□ -0.66
CCDC84-209ENST00000580556 CACNA1CQ13936 2221 aa10.9□□□□□ -0.66
CCDC84-209ENST00000580556 ANKRD65E5RJM6 399 aa10.89□□□□□ -0.67
CCDC84-209ENST00000580556 ENTPD5O75356 428 aa10.89□□□□□ -0.67
CCDC84-209ENST00000580556 DEAF1O75398 565 aaPredicted RBP10.89□□□□□ -0.67
CCDC84-209ENST00000580556 DIRAS1O95057 198 aa10.89□□□□□ -0.67
CCDC84-209ENST00000580556 MT-ND1P03886 318 aa10.89□□□□□ -0.67
CCDC84-209ENST00000580556 LIMS1P48059 325 aa10.89□□□□□ -0.67
CCDC84-209ENST00000580556 ERFP50548 548 aa10.89□□□□□ -0.67
CCDC84-209ENST00000580556 HSF1Q00613 529 aa10.89□□□□□ -0.67
CCDC84-209ENST00000580556 SPIBQ01892 262 aa10.89□□□□□ -0.67
CCDC84-209ENST00000580556 EGR4Q05215 589 aa10.89□□□□□ -0.67
CCDC84-209ENST00000580556 RBPJQ06330 500 aa10.89□□□□□ -0.67
CCDC84-209ENST00000580556 CTU2Q2VPK5 515 aaKnown RBP10.89□□□□□ -0.67
CCDC84-209ENST00000580556 WLSQ5T9L3 541 aa10.89□□□□□ -0.67
CCDC84-209ENST00000580556 POMZP3Q6PJE2 187 aa10.89□□□□□ -0.67
CCDC84-209ENST00000580556 WDR88Q6ZMY6 472 aa10.89□□□□□ -0.67
CCDC84-209ENST00000580556 Q6ZPB1 254 aaPredicted RBP10.89□□□□□ -0.67
CCDC84-209ENST00000580556 NCCRP1Q6ZVX7 275 aaPredicted RBP10.89□□□□□ -0.67
CCDC84-209ENST00000580556 RNF113BQ8IZP6 322 aaKnown RBP10.89□□□□□ -0.67
CCDC84-209ENST00000580556 OR2V1Q8NHB1 315 aa10.89□□□□□ -0.67
CCDC84-209ENST00000580556 SLC7A13Q8TCU3 470 aa10.89□□□□□ -0.67
CCDC84-209ENST00000580556 TMEM239Q8WW34 195 aa10.89□□□□□ -0.67
CCDC84-209ENST00000580556 ACOT11Q8WXI4 607 aaPredicted RBP10.89□□□□□ -0.67
CCDC84-209ENST00000580556 C14orf79Q96F83 325 aa10.89□□□□□ -0.67
CCDC84-209ENST00000580556 WDYHV1Q96HA8 205 aa10.89□□□□□ -0.67
CCDC84-209ENST00000580556 KLHL4Q9C0H6 718 aa10.89□□□□□ -0.67
CCDC84-209ENST00000580556 TMEM185BQ9H7F4 350 aa10.89□□□□□ -0.67
CCDC84-209ENST00000580556 DNAJB9Q9UBS3 223 aa10.89□□□□□ -0.67
CCDC84-209ENST00000580556 TRAPPC4Q9Y296 219 aa10.89□□□□□ -0.67
CCDC84-209ENST00000580556 ZNF835Q9Y2P0 537 aa10.89□□□□□ -0.67
CCDC84-209ENST00000580556 TESMINQ9Y4I5 508 aa10.89□□□□□ -0.67
CCDC84-209ENST00000580556 LYVE1Q9Y5Y7 322 aa10.89□□□□□ -0.67
CCDC84-209ENST00000580556 NIPBLQ6KC79 2804 aaeCLIP10.89□□□□□ -0.67
CCDC84-209ENST00000580556 ANKHD1Q8IWZ3 2542 aaKnown RBP10.88□□□□□ -0.67
CCDC84-209ENST00000580556 FBN3Q75N90 2809 aa10.88□□□□□ -0.67
CCDC84-209ENST00000580556 TRAV36DV7A0A075B6V5 113 aa10.88□□□□□ -0.67
CCDC84-209ENST00000580556 OR2T1O43869 369 aa10.88□□□□□ -0.67
CCDC84-209ENST00000580556 WDR1O75083 606 aa10.88□□□□□ -0.67
CCDC84-209ENST00000580556 GADD45GO95257 159 aa10.88□□□□□ -0.67
CCDC84-209ENST00000580556 PMS2P2O95744 297 aa10.88□□□□□ -0.67
CCDC84-209ENST00000580556 CST1P01037 141 aa10.88□□□□□ -0.67
CCDC84-209ENST00000580556 HOXD4P09016 255 aaPredicted RBP10.88□□□□□ -0.67
CCDC84-209ENST00000580556 FASP25445 335 aa10.88□□□□□ -0.67
CCDC84-209ENST00000580556 RRM2P31350 389 aa10.88□□□□□ -0.67
CCDC84-209ENST00000580556 SFTPDP35247 375 aa10.88□□□□□ -0.67
CCDC84-209ENST00000580556 IDUAP35475 653 aa10.88□□□□□ -0.67
CCDC84-209ENST00000580556 ART1P52961 327 aa10.88□□□□□ -0.67
CCDC84-209ENST00000580556 CLDN15P56746 228 aa10.88□□□□□ -0.67
CCDC84-209ENST00000580556 CLDN20P56880 219 aa10.88□□□□□ -0.67
CCDC84-209ENST00000580556 RPS3AP61247 264 aaKnown RBP10.88□□□□□ -0.67
CCDC84-209ENST00000580556 CSNK2A1P68400 391 aaPredicted RBP10.88□□□□□ -0.67
CCDC84-209ENST00000580556 MFSD13AQ14CX5 517 aa10.88□□□□□ -0.67
CCDC84-209ENST00000580556 SF3B4Q15427 424 aaKnown RBP eCLIP10.88□□□□□ -0.671e-9■■■■■ 35.3
CCDC84-209ENST00000580556 ATP6AP1Q15904 470 aa10.88□□□□□ -0.67
CCDC84-209ENST00000580556 C3AR1Q16581 482 aa10.88□□□□□ -0.67
CCDC84-209ENST00000580556 TMEM176BQ3YBM2 270 aaPredicted RBP10.88□□□□□ -0.67
CCDC84-209ENST00000580556 PDSS1Q5T2R2 415 aa10.88□□□□□ -0.67
CCDC84-209ENST00000580556 C1orf140Q5VVS0 124 aa10.88□□□□□ -0.67
CCDC84-209ENST00000580556 TTC33Q6PID6 262 aaPredicted RBP10.88□□□□□ -0.67
CCDC84-209ENST00000580556 XKRXQ6PP77 449 aa10.88□□□□□ -0.67
CCDC84-209ENST00000580556 RPTNQ6XPR3 784 aa10.88□□□□□ -0.67
CCDC84-209ENST00000580556 TMPPEQ6ZT21 453 aa10.88□□□□□ -0.67
CCDC84-209ENST00000580556 MBOAT2Q6ZWT7 520 aa10.88□□□□□ -0.67
CCDC84-209ENST00000580556 NKAIN4Q8IVV8 208 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms