RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-209	ENST00000578329	SOAT1	P35610	550 aa		3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	APOBEC1	P41238	236 aa	Known RBP	3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	SLC1A6	P48664	564 aa		3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	SELENOP	P49908	381 aa		3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	RPL14	P50914	215 aa	Known RBP	3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	CCR4	P51679	360 aa		3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	CDH11	P55287	796 aa		3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	TUBA1B	P68363	451 aa		3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	TUBA4A	P68366	448 aa		3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	VLDLR	P98155	873 aa		3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	LOXL1	Q08397	574 aa	Predicted RBP	3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	DMTN	Q08495	405 aa		3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	CEACAM7	Q14002	265 aa		3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	STK11	Q15831	433 aa		3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	ADIPOQ	Q15848	244 aa		3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	ADRM1	Q16186	407 aa		3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	LSM12	Q3MHD2	195 aa	Known RBP	3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	SPDYE7P	Q495Y7	208 aa		3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	LRRC74B	Q6ZQY2	392 aa		3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	IL17REL	Q6ZVW7	336 aa		3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	CREB3L2	Q70SY1	520 aa		3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	TUBA1A	Q71U36	451 aa		3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	EIF3M	Q7L2H7	374 aa	Known RBP	3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	SERPINA11	Q86U17	422 aa		3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	CARM1	Q86X55	608 aa		3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	NUDCD3	Q8IVD9	361 aa		3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	TMEM123	Q8N131	208 aa		3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	ZCCHC24	Q8N2G6	241 aa	Known RBP	3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	KDM8	Q8N371	416 aa		3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	RIBC1	Q8N443	379 aa	Predicted RBP	3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	TMCO5A	Q8N6Q1	288 aa		3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	ANKS4B	Q8N8V4	417 aa		3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	OR9K2	Q8NGE7	335 aa		3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	FGFBP3	Q8TAT2	258 aa		3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	SLC38A5	Q8WUX1	472 aa		3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	ANP32B	Q92688	251 aa	Known RBP	3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	GTF2H4	Q92759	462 aa		3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	MAL2	Q969L2	176 aa		3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	TMEM45B	Q96B21	275 aa		3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	C3orf49	Q96BT1	292 aa		3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	MOAP1	Q96BY2	351 aa		3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	TLCD1	Q96CP7	247 aa		3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	MSI2	Q96DH6	328 aa	Known RBP	3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	KTI12	Q96EK9	354 aa	Predicted RBP	3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	C1orf159	Q96HA4	380 aa		3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	ZIM3	Q96PE6	472 aa		3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	TRNT1	Q96Q11	434 aa	Known RBP	3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	DHRS9	Q9BPW9	319 aa		3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	PARD6B	Q9BYG5	372 aa		3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	CXorf56	Q9H5V9	222 aa		3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	ESRP2	Q9H6T0	727 aa	Known RBP	3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	MANSC1	Q9H8J5	431 aa		3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	SSU72	Q9NP77	194 aa	Known RBP	3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	POLE3	Q9NRF9	147 aa		3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	SDR39U1	Q9NRG7	319 aa	Predicted RBP	3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	CBLN4	Q9NTU7	201 aa		3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	ATAD3A	Q9NVI7	634 aa		3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	TMEM181	Q9P2C4	612 aa		3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	CRNN	Q9UBG3	495 aa	Predicted RBP	3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	MARCO	Q9UEW3	520 aa	Predicted RBP	3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	MOK	Q9UQ07	419 aa		3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	TRAPPC4	Q9Y296	219 aa		3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	HDGFL3	Q9Y3E1	203 aa		3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	MGAM2	Q2M2H8	2515 aa		3.86	□□□□□ -1.79
PPP4R1-209	ENST00000578329		A0A1W2PP18	115 aa		3.86	□□□□□ -1.79
PPP4R1-209	ENST00000578329	FAM171A2	A8MVW0	826 aa		3.86	□□□□□ -1.79
PPP4R1-209	ENST00000578329	LRRN3	E7EW58	273 aa		3.86	□□□□□ -1.79
PPP4R1-209	ENST00000578329	MS4A18	H0YCH9	400 aa		3.86	□□□□□ -1.79
PPP4R1-209	ENST00000578329		M0R1B8	84 aa		3.86	□□□□□ -1.79
PPP4R1-209	ENST00000578329	PHF1	O43189	567 aa	Predicted RBP	3.86	□□□□□ -1.79
PPP4R1-209	ENST00000578329	ZNF208	O43345	1280 aa		3.86	□□□□□ -1.79
PPP4R1-209	ENST00000578329	DNPH1	O43598	174 aa		3.86	□□□□□ -1.79
PPP4R1-209	ENST00000578329	TRAF3IP2	O43734	574 aa	Predicted RBP	3.86	□□□□□ -1.79
PPP4R1-209	ENST00000578329	LILRA1	O75019	489 aa		3.86	□□□□□ -1.79
PPP4R1-209	ENST00000578329	LGI1	O95970	557 aa		3.86	□□□□□ -1.79
PPP4R1-209	ENST00000578329	CHEK2	O96017	543 aa		3.86	□□□□□ -1.79
PPP4R1-209	ENST00000578329	AK1	P00568	194 aa		3.86	□□□□□ -1.79
PPP4R1-209	ENST00000578329	PGR	P06401	933 aa		3.86	□□□□□ -1.79
PPP4R1-209	ENST00000578329	CECR9	P0C854	216 aa		3.86	□□□□□ -1.79
PPP4R1-209	ENST00000578329	PABPC4L	P0CB38	370 aa	Known RBP	3.86	□□□□□ -1.79
PPP4R1-209	ENST00000578329	ZCCHC18	P0CG32	403 aa		3.86	□□□□□ -1.79
PPP4R1-209	ENST00000578329	HLA-DOB	P13765	273 aa		3.86	□□□□□ -1.79
PPP4R1-209	ENST00000578329	HPGD	P15428	266 aa		3.86	□□□□□ -1.79
PPP4R1-209	ENST00000578329	ZNF16	P17020	682 aa	Predicted RBP	3.86	□□□□□ -1.79
PPP4R1-209	ENST00000578329	LBP	P18428	481 aa		3.86	□□□□□ -1.79
PPP4R1-209	ENST00000578329	PGC	P20142	388 aa		3.86	□□□□□ -1.79
PPP4R1-209	ENST00000578329	PTAFR	P25105	342 aa		3.86	□□□□□ -1.79
PPP4R1-209	ENST00000578329	MAPK1	P28482	360 aa		3.86	□□□□□ -1.79
PPP4R1-209	ENST00000578329	SLC7A1	P30825	629 aa		3.86	□□□□□ -1.79
PPP4R1-209	ENST00000578329	IDUA	P35475	653 aa		3.86	□□□□□ -1.79
PPP4R1-209	ENST00000578329	RPL3	P39023	403 aa	Known RBP	3.86	□□□□□ -1.79
PPP4R1-209	ENST00000578329	SLC1A3	P43003	542 aa		3.86	□□□□□ -1.79
PPP4R1-209	ENST00000578329	CLK1	P49759	484 aa	Known RBP	3.86	□□□□□ -1.79
PPP4R1-209	ENST00000578329	OR2B6	P58173	313 aa		3.86	□□□□□ -1.79
PPP4R1-209	ENST00000578329	NPTX1	Q15818	432 aa		3.86	□□□□□ -1.79
PPP4R1-209	ENST00000578329	MS4A18	Q3C1V0	323 aa		3.86	□□□□□ -1.79
PPP4R1-209	ENST00000578329	TBRG1	Q3YBR2	411 aa		3.86	□□□□□ -1.79
PPP4R1-209	ENST00000578329	PAGE3	Q5JUK9	113 aa		3.86	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms