RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 ARHGAP11BQ3KRB8 267 aa7.81□□□□□ -1.16
SMG6-218ENST00000575454 FAM153CQ494X1 144 aa7.81□□□□□ -1.16
SMG6-218ENST00000575454 GALNTL6Q49A17 601 aa7.81□□□□□ -1.16
SMG6-218ENST00000575454 ATAD3BQ5T9A4 648 aa7.81□□□□□ -1.16
SMG6-218ENST00000575454 AP1ARQ63HQ0 302 aa7.81□□□□□ -1.16
SMG6-218ENST00000575454 REP15Q6BDI9 236 aa7.81□□□□□ -1.16
SMG6-218ENST00000575454 CLEC6AQ6EIG7 209 aa7.81□□□□□ -1.16
SMG6-218ENST00000575454 AAED1Q7RTV5 226 aa7.81□□□□□ -1.16
SMG6-218ENST00000575454 C16orf62Q7Z3J2 963 aa7.81□□□□□ -1.16
SMG6-218ENST00000575454 PEG10Q86TG7 708 aaKnown RBP7.81□□□□□ -1.16
SMG6-218ENST00000575454 ADGRG3Q86Y34 549 aa7.81□□□□□ -1.16
SMG6-218ENST00000575454 ARFGAP2Q8N6H7 521 aa7.81□□□□□ -1.16
SMG6-218ENST00000575454 IL17RDQ8NFM7 739 aa7.81□□□□□ -1.16
SMG6-218ENST00000575454 OR7A2PQ8NGA2 310 aa7.81□□□□□ -1.16
SMG6-218ENST00000575454 OR51F2Q8NH61 342 aa7.81□□□□□ -1.16
SMG6-218ENST00000575454 MAGEE2Q8TD90 523 aaPredicted RBP7.81□□□□□ -1.16
SMG6-218ENST00000575454 IFT81Q8WYA0 676 aa7.81□□□□□ -1.16
SMG6-218ENST00000575454 TMEM186Q96B77 213 aa7.81□□□□□ -1.16
SMG6-218ENST00000575454 COQ8BQ96D53 544 aa7.81□□□□□ -1.16
SMG6-218ENST00000575454 PPP3R2Q96LZ3 170 aa7.81□□□□□ -1.16
SMG6-218ENST00000575454 DOK1Q99704 481 aa7.81□□□□□ -1.16
SMG6-218ENST00000575454 OR11A1Q9GZK7 315 aa7.81□□□□□ -1.16
SMG6-218ENST00000575454 ZNF350Q9GZX5 532 aa7.81□□□□□ -1.16
SMG6-218ENST00000575454 OXSMQ9NWU1 459 aa7.81□□□□□ -1.16
SMG6-218ENST00000575454 CRNNQ9UBG3 495 aaPredicted RBP7.81□□□□□ -1.16
SMG6-218ENST00000575454 USP22Q9UPT9 525 aa7.81□□□□□ -1.16
SMG6-218ENST00000575454 FREM1Q5H8C1 2179 aa7.81□□□□□ -1.16
SMG6-218ENST00000575454 PLCE1Q9P212 2302 aa7.8□□□□□ -1.16
SMG6-218ENST00000575454 CFLARO15519 480 aa7.8□□□□□ -1.16
SMG6-218ENST00000575454 VAMP5O95183 116 aa7.8□□□□□ -1.16
SMG6-218ENST00000575454 C6orf47O95873 294 aa7.8□□□□□ -1.16
SMG6-218ENST00000575454 GPIP06744 558 aa7.8□□□□□ -1.16
SMG6-218ENST00000575454 MSMBP08118 114 aa7.8□□□□□ -1.16
SMG6-218ENST00000575454 UQCRBP14927 111 aa7.8□□□□□ -1.16
SMG6-218ENST00000575454 CPA3P15088 417 aa7.8□□□□□ -1.16
SMG6-218ENST00000575454 ANPEPP15144 967 aa7.8□□□□□ -1.16
SMG6-218ENST00000575454 PRPS1L1P21108 318 aa7.8□□□□□ -1.16
SMG6-218ENST00000575454 IDH2P48735 452 aaKnown RBP7.8□□□□□ -1.16
SMG6-218ENST00000575454 EVX1P49640 407 aa7.8□□□□□ -1.16
SMG6-218ENST00000575454 POLR2HP52434 150 aaKnown RBP7.8□□□□□ -1.16
SMG6-218ENST00000575454 ARFIP2P53365 341 aa7.8□□□□□ -1.16
SMG6-218ENST00000575454 SH3BGRP55822 239 aaPredicted RBP7.8□□□□□ -1.16
SMG6-218ENST00000575454 TMEM33P57088 247 aa7.8□□□□□ -1.16
SMG6-218ENST00000575454 ETF1P62495 437 aaKnown RBP7.8□□□□□ -1.16
SMG6-218ENST00000575454 IL1RL1Q01638 556 aa7.8□□□□□ -1.16
SMG6-218ENST00000575454 CCNIQ14094 377 aa7.8□□□□□ -1.16
SMG6-218ENST00000575454 TBRG1Q3YBR2 411 aa7.8□□□□□ -1.16
SMG6-218ENST00000575454 PDLIM3Q53GG5 364 aaPredicted RBP7.8□□□□□ -1.16
SMG6-218ENST00000575454 LIPMQ5VYY2 423 aa7.8□□□□□ -1.16
SMG6-218ENST00000575454 EMBQ6PCB8 327 aa7.8□□□□□ -1.16
SMG6-218ENST00000575454 SHISA2Q6UWI4 295 aa7.8□□□□□ -1.16
SMG6-218ENST00000575454 C6orf120Q7Z4R8 191 aa7.8□□□□□ -1.16
SMG6-218ENST00000575454 SPATA21Q7Z572 469 aa7.8□□□□□ -1.16
SMG6-218ENST00000575454 DDIASQ8IXT1 998 aa7.8□□□□□ -1.16
SMG6-218ENST00000575454 CCDC36Q8IYA8 594 aa7.8□□□□□ -1.16
SMG6-218ENST00000575454 SVOPLQ8N434 492 aa7.8□□□□□ -1.16
SMG6-218ENST00000575454 CCDC63Q8NA47 563 aa7.8□□□□□ -1.16
SMG6-218ENST00000575454 FAM71CQ8NEG0 241 aa7.8□□□□□ -1.16
SMG6-218ENST00000575454 ANKK1Q8NFD2 765 aa7.8□□□□□ -1.16
SMG6-218ENST00000575454 OR9K2Q8NGE7 335 aa7.8□□□□□ -1.16
SMG6-218ENST00000575454 OR5D16Q8NGK9 328 aa7.8□□□□□ -1.16
SMG6-218ENST00000575454 OR1K1Q8NGR3 316 aa7.8□□□□□ -1.16
SMG6-218ENST00000575454 OR2T11Q8NH01 316 aa7.8□□□□□ -1.16
SMG6-218ENST00000575454 AURKBQ96GD4 344 aaPredicted RBP7.8□□□□□ -1.16
SMG6-218ENST00000575454 SUCNR1Q9BXA5 334 aa7.8□□□□□ -1.16
SMG6-218ENST00000575454 ZNF696Q9H7X3 374 aa7.8□□□□□ -1.16
SMG6-218ENST00000575454 TNFRSF12AQ9NP84 129 aa7.8□□□□□ -1.16
SMG6-218ENST00000575454 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.8□□□□□ -1.16
SMG6-218ENST00000575454 PSMC3IPQ9P2W1 217 aaPredicted RBP7.8□□□□□ -1.16
SMG6-218ENST00000575454 KCNE5Q9UJ90 142 aa7.8□□□□□ -1.16
SMG6-218ENST00000575454 MID2Q9UJV3 735 aa7.8□□□□□ -1.16
SMG6-218ENST00000575454 MKLN1Q9UL63 735 aa7.8□□□□□ -1.16
SMG6-218ENST00000575454 PTGDR2Q9Y5Y4 395 aa7.8□□□□□ -1.16
SMG6-218ENST00000575454 PRKDCP78527 4128 aaKnown RBP7.8□□□□□ -1.16
SMG6-218ENST00000575454 TMED7-TICAM2A0A0A6YYA0 188 aa7.79□□□□□ -1.16
SMG6-218ENST00000575454 TRAV20A0A0B4J274 112 aa7.79□□□□□ -1.16
SMG6-218ENST00000575454 LGI1O95970 557 aa7.79□□□□□ -1.16
SMG6-218ENST00000575454 IGKV3-15P01624 115 aa7.79□□□□□ -1.16
SMG6-218ENST00000575454 IGLV1-44P01699 117 aa7.79□□□□□ -1.16
SMG6-218ENST00000575454 PROCP04070 461 aa7.79□□□□□ -1.16
SMG6-218ENST00000575454 ADRA2AP08913 450 aa7.79□□□□□ -1.16
SMG6-218ENST00000575454 CECR9P0C854 216 aa7.79□□□□□ -1.16
SMG6-218ENST00000575454 CBR1P16152 277 aa7.79□□□□□ -1.16
SMG6-218ENST00000575454 CCNA2P20248 432 aa7.79□□□□□ -1.16
SMG6-218ENST00000575454 GCAP28676 217 aa7.79□□□□□ -1.16
SMG6-218ENST00000575454 THBS4P35443 961 aa7.79□□□□□ -1.16
SMG6-218ENST00000575454 SOAT1P35610 550 aa7.79□□□□□ -1.16
SMG6-218ENST00000575454 ARR3P36575 388 aa7.79□□□□□ -1.16
SMG6-218ENST00000575454 GPR6P46095 362 aaPredicted RBP7.79□□□□□ -1.16
SMG6-218ENST00000575454 KCNJ10P78508 379 aa7.79□□□□□ -1.16
SMG6-218ENST00000575454 GNA13Q14344 377 aa7.79□□□□□ -1.16
SMG6-218ENST00000575454 TRIP10Q15642 601 aa7.79□□□□□ -1.16
SMG6-218ENST00000575454 ADRM1Q16186 407 aa7.79□□□□□ -1.16
SMG6-218ENST00000575454 SLC9B1Q4ZJI4 515 aa7.79□□□□□ -1.16
SMG6-218ENST00000575454 OTUD3Q5T2D3 398 aaPredicted RBP7.79□□□□□ -1.16
SMG6-218ENST00000575454 KANK2Q63ZY3 851 aa7.79□□□□□ -1.16
SMG6-218ENST00000575454 TMEM225Q6GV28 225 aa7.79□□□□□ -1.16
SMG6-218ENST00000575454 FAHD2BQ6P2I3 314 aaPredicted RBP7.79□□□□□ -1.16
SMG6-218ENST00000575454 TRMT10CQ7L0Y3 403 aaKnown RBP7.79□□□□□ -1.16
SMG6-218ENST00000575454 CMIPQ8IY22 773 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms