RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 GALNT9Q9HCQ5 603 aa26.46■■□□□ 1.83
CTDNEP1-208ENST00000573600 ZNF229Q9UJW7 825 aa26.46■■□□□ 1.83
CTDNEP1-208ENST00000573600 EXOGQ9Y2C4 368 aaKnown RBP26.46■■□□□ 1.83
CTDNEP1-208ENST00000573600 EXOSC1Q9Y3B2 195 aaKnown RBP26.46■■□□□ 1.83
CTDNEP1-208ENST00000573600 MPDZO75970 2070 aa26.46■■□□□ 1.83
CTDNEP1-208ENST00000573600 IGLV3-32A0A0A0MS00 114 aa26.45■■□□□ 1.83
CTDNEP1-208ENST00000573600 FAM183AA6NL82 134 aa26.45■■□□□ 1.83
CTDNEP1-208ENST00000573600 MCIDASD6RGH6 385 aa26.45■■□□□ 1.83
CTDNEP1-208ENST00000573600 MYL12BO14950 172 aa26.45■■□□□ 1.83
CTDNEP1-208ENST00000573600 IDH3BO43837 385 aa26.45■■□□□ 1.83
CTDNEP1-208ENST00000573600 AHCYL1O43865 530 aa26.45■■□□□ 1.83
CTDNEP1-208ENST00000573600 PAICSP22234 425 aaKnown RBP26.45■■□□□ 1.83
CTDNEP1-208ENST00000573600 OTX2P32243 289 aa26.45■■□□□ 1.83
CTDNEP1-208ENST00000573600 LIPAP38571 399 aa26.45■■□□□ 1.83
CTDNEP1-208ENST00000573600 SOX3P41225 446 aa26.45■■□□□ 1.83
CTDNEP1-208ENST00000573600 DLX5P56178 289 aa26.45■■□□□ 1.83
CTDNEP1-208ENST00000573600 RPS18P62269 152 aaKnown RBP26.45■■□□□ 1.83
CTDNEP1-208ENST00000573600 ITGADQ13349 1161 aa26.45■■□□□ 1.83
CTDNEP1-208ENST00000573600 CTF1Q16619 201 aa26.45■■□□□ 1.83
CTDNEP1-208ENST00000573600 STPG1Q5TH74 334 aa26.45■■□□□ 1.83
CTDNEP1-208ENST00000573600 NIPAL3Q6P499 406 aa26.45■■□□□ 1.83
CTDNEP1-208ENST00000573600 BBS1Q8NFJ9 593 aa26.45■■□□□ 1.83
CTDNEP1-208ENST00000573600 OTULINQ96BN8 352 aa26.45■■□□□ 1.83
CTDNEP1-208ENST00000573600 KTI12Q96EK9 354 aaPredicted RBP26.45■■□□□ 1.83
CTDNEP1-208ENST00000573600 OR5M11Q96RB7 305 aa26.45■■□□□ 1.83
CTDNEP1-208ENST00000573600 MGLLQ99685 303 aa26.45■■□□□ 1.83
CTDNEP1-208ENST00000573600 B3GNT4Q9C0J1 378 aa26.45■■□□□ 1.83
CTDNEP1-208ENST00000573600 LSM2Q9Y333 95 aaKnown RBP26.45■■□□□ 1.83
CTDNEP1-208ENST00000573600 WIF1Q9Y5W5 379 aa26.45■■□□□ 1.83
CTDNEP1-208ENST00000573600 CACNA1HO95180 2353 aa26.45■■□□□ 1.82
CTDNEP1-208ENST00000573600 ARPC3O15145 178 aa26.45■■□□□ 1.82
CTDNEP1-208ENST00000573600 SUSD5O60279 629 aa26.45■■□□□ 1.82
CTDNEP1-208ENST00000573600 PTGDSP41222 190 aa26.45■■□□□ 1.82
CTDNEP1-208ENST00000573600 C1DQ13901 141 aaKnown RBP26.45■■□□□ 1.82
CTDNEP1-208ENST00000573600 ZNF362Q5T0B9 420 aaPredicted RBP26.45■■□□□ 1.82
CTDNEP1-208ENST00000573600 ADGRG3Q86Y34 549 aa26.45■■□□□ 1.82
CTDNEP1-208ENST00000573600 MOGAT1Q96PD6 335 aa26.45■■□□□ 1.82
CTDNEP1-208ENST00000573600 GPR87Q9BY21 358 aa26.45■■□□□ 1.82
CTDNEP1-208ENST00000573600 NRIP3Q9NQ35 241 aa26.45■■□□□ 1.82
CTDNEP1-208ENST00000573600 CLEC2DQ9UHP7 191 aa26.45■■□□□ 1.82
CTDNEP1-208ENST00000573600 SLC6A5Q9Y345 797 aa26.45■■□□□ 1.82
CTDNEP1-208ENST00000573600 A0A1W2PPW3 197 aa26.44■■□□□ 1.82
CTDNEP1-208ENST00000573600 A8MVM7 634 aa26.44■■□□□ 1.82
CTDNEP1-208ENST00000573600 C21orf140B9A014 251 aa26.44■■□□□ 1.82
CTDNEP1-208ENST00000573600 HPP00738 406 aa26.44■■□□□ 1.82
CTDNEP1-208ENST00000573600 HIST1H2ABP04908 130 aa26.44■■□□□ 1.82
CTDNEP1-208ENST00000573600 NFATC3Q12968 1075 aa26.44■■□□□ 1.82
CTDNEP1-208ENST00000573600 OR5M10Q6IEU7 315 aa26.44■■□□□ 1.82
CTDNEP1-208ENST00000573600 TMEM81Q6P7N7 255 aa26.44■■□□□ 1.82
CTDNEP1-208ENST00000573600 HIST3H2AQ7L7L0 130 aa26.44■■□□□ 1.82
CTDNEP1-208ENST00000573600 ARMC10Q8N2F6 343 aa26.44■■□□□ 1.82
CTDNEP1-208ENST00000573600 GALNT15Q8N3T1 639 aa26.44■■□□□ 1.82
CTDNEP1-208ENST00000573600 SLC37A3Q8NCC5 494 aa26.44■■□□□ 1.82
CTDNEP1-208ENST00000573600 NLGN4YQ8NFZ3 816 aaPredicted RBP26.44■■□□□ 1.82
CTDNEP1-208ENST00000573600 STK35Q8TDR2 534 aa26.44■■□□□ 1.82
CTDNEP1-208ENST00000573600 HIST1H2ACQ93077 130 aa26.44■■□□□ 1.82
CTDNEP1-208ENST00000573600 TAAR8Q969N4 342 aa26.44■■□□□ 1.82
CTDNEP1-208ENST00000573600 SECISBP2Q96T21 854 aaKnown RBP26.44■■□□□ 1.82
CTDNEP1-208ENST00000573600 CPNE5Q9HCH3 593 aa26.44■■□□□ 1.82
CTDNEP1-208ENST00000573600 IER3IP1Q9Y5U9 82 aa26.44■■□□□ 1.82
CTDNEP1-208ENST00000573600 PCNX3Q9H6A9 2034 aa26.44■■□□□ 1.82
CTDNEP1-208ENST00000573600 WDR87Q6ZQQ6 2873 aa26.44■■□□□ 1.82
CTDNEP1-208ENST00000573600 SDK2Q58EX2 2172 aa26.43■■□□□ 1.82
CTDNEP1-208ENST00000573600 TNFSF12-TNFSF13A0A0A6YY99 330 aa26.43■■□□□ 1.82
CTDNEP1-208ENST00000573600 C2orf72A6NCS6 295 aa26.43■■□□□ 1.82
CTDNEP1-208ENST00000573600 SLC22A31A6NKX4 558 aa26.43■■□□□ 1.82
CTDNEP1-208ENST00000573600 SLC22A1O15245 554 aa26.43■■□□□ 1.82
CTDNEP1-208ENST00000573600 MT-ATP6P00846 226 aa26.43■■□□□ 1.82
CTDNEP1-208ENST00000573600 CASP3P42574 277 aa26.43■■□□□ 1.82
CTDNEP1-208ENST00000573600 LTBQ06643 244 aa26.43■■□□□ 1.82
CTDNEP1-208ENST00000573600 SNTA1Q13424 505 aa26.43■■□□□ 1.82
CTDNEP1-208ENST00000573600 DNASE1L3Q13609 305 aa26.43■■□□□ 1.82
CTDNEP1-208ENST00000573600 SPHARQ15513 63 aa26.43■■□□□ 1.82
CTDNEP1-208ENST00000573600 POMZP3Q6PJE2 187 aa26.43■■□□□ 1.82
CTDNEP1-208ENST00000573600 ASB15Q8WXK1 588 aa26.43■■□□□ 1.82
CTDNEP1-208ENST00000573600 PTP4A1Q93096 173 aa26.43■■□□□ 1.82
CTDNEP1-208ENST00000573600 DCUN1D5Q9BTE7 237 aa26.43■■□□□ 1.82
CTDNEP1-208ENST00000573600 WDR70Q9NW82 654 aa26.43■■□□□ 1.82
CTDNEP1-208ENST00000573600 MED11Q9P086 117 aa26.43■■□□□ 1.82
CTDNEP1-208ENST00000573600 TMEM72A0PK05 275 aa26.42■■□□□ 1.82
CTDNEP1-208ENST00000573600 BLOC1S5-TXNDC5H3BN57 136 aa26.42■■□□□ 1.82
CTDNEP1-208ENST00000573600 BGLAPP02818 100 aa26.42■■□□□ 1.82
CTDNEP1-208ENST00000573600 HSMCR30P0CW71 290 aa26.42■■□□□ 1.82
CTDNEP1-208ENST00000573600 PRKCAP17252 672 aa26.42■■□□□ 1.82
CTDNEP1-208ENST00000573600 PEX19P40855 299 aa26.42■■□□□ 1.82
CTDNEP1-208ENST00000573600 APOBEC1P41238 236 aaKnown RBP26.42■■□□□ 1.82
CTDNEP1-208ENST00000573600 RPS5P46782 204 aaKnown RBP26.42■■□□□ 1.82
CTDNEP1-208ENST00000573600 SSR4P51571 173 aa26.42■■□□□ 1.82
CTDNEP1-208ENST00000573600 BICRALQ6AI39 1079 aa26.42■■□□□ 1.82
CTDNEP1-208ENST00000573600 RPS19BP1Q86WX3 136 aaKnown RBP26.42■■□□□ 1.82
CTDNEP1-208ENST00000573600 CDCP1Q9H5V8 836 aa26.42■■□□□ 1.82
CTDNEP1-208ENST00000573600 TMEM129A0AVI4 362 aa26.42■■□□□ 1.82
CTDNEP1-208ENST00000573600 NPIPB7O75200 414 aa26.42■■□□□ 1.82
CTDNEP1-208ENST00000573600 TSPAN19P0C672 248 aa26.42■■□□□ 1.82
CTDNEP1-208ENST00000573600 APEHP13798 732 aaKnown RBP26.42■■□□□ 1.82
CTDNEP1-208ENST00000573600 UQCRC1P31930 480 aa26.42■■□□□ 1.82
CTDNEP1-208ENST00000573600 RGS6P49758 472 aa26.42■■□□□ 1.82
CTDNEP1-208ENST00000573600 MLF1P58340 268 aa26.42■■□□□ 1.82
CTDNEP1-208ENST00000573600 CRMP1Q14194 572 aa26.42■■□□□ 1.82
CTDNEP1-208ENST00000573600 FCRLBQ6BAA4 426 aa26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms