RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 CMTM5Q96DZ9 223 aa12.92□□□□□ -0.34
LITAF-208ENST00000571627 PIK3IP1Q96FE7 263 aa12.92□□□□□ -0.34
LITAF-208ENST00000571627 ACTR6Q9GZN1 396 aa12.92□□□□□ -0.34
LITAF-208ENST00000571627 MYLK2Q9H1R3 596 aa12.92□□□□□ -0.34
LITAF-208ENST00000571627 PLEKHF2Q9H8W4 249 aa12.92□□□□□ -0.34
LITAF-208ENST00000571627 ZNF226Q9NYT6 803 aa12.92□□□□□ -0.34
LITAF-208ENST00000571627 PRSS50Q9UI38 385 aa12.92□□□□□ -0.34
LITAF-208ENST00000571627 AP3M1Q9Y2T2 418 aa12.92□□□□□ -0.34
LITAF-208ENST00000571627 HDGFL3Q9Y3E1 203 aa12.92□□□□□ -0.34
LITAF-208ENST00000571627 ROS1P08922 2347 aa12.91□□□□□ -0.34
LITAF-208ENST00000571627 ZNF716A6NP11 495 aa12.91□□□□□ -0.34
LITAF-208ENST00000571627 GCM2O75603 506 aaPredicted RBP12.91□□□□□ -0.34
LITAF-208ENST00000571627 GOSR1O95249 250 aa12.91□□□□□ -0.34
LITAF-208ENST00000571627 IMPDH2P12268 514 aa12.91□□□□□ -0.34
LITAF-208ENST00000571627 AQP1P29972 269 aa12.91□□□□□ -0.34
LITAF-208ENST00000571627 PCGF2P35227 344 aa12.91□□□□□ -0.34
LITAF-208ENST00000571627 PCBP3P57721 371 aaKnown RBP12.91□□□□□ -0.34
LITAF-208ENST00000571627 BNIP2Q12982 314 aa12.91□□□□□ -0.34
LITAF-208ENST00000571627 VMACQ2NL98 169 aa12.91□□□□□ -0.34
LITAF-208ENST00000571627 WBP2NLQ6ICG8 309 aa12.91□□□□□ -0.34
LITAF-208ENST00000571627 ALKBH2Q6NS38 261 aa12.91□□□□□ -0.34
LITAF-208ENST00000571627 PAMR1Q6UXH9 720 aa12.91□□□□□ -0.34
LITAF-208ENST00000571627 ARPINQ7Z6K5 226 aa12.91□□□□□ -0.34
LITAF-208ENST00000571627 PIGWQ7Z7B1 504 aa12.91□□□□□ -0.34
LITAF-208ENST00000571627 PATL1Q86TB9 770 aaKnown RBP12.91□□□□□ -0.34
LITAF-208ENST00000571627 ARMC8Q8IUR7 673 aa12.91□□□□□ -0.34
LITAF-208ENST00000571627 CCDC103Q8IW40 242 aa12.91□□□□□ -0.34
LITAF-208ENST00000571627 GABRG1Q8N1C3 465 aa12.91□□□□□ -0.34
LITAF-208ENST00000571627 POU5F2Q8N7G0 328 aa12.91□□□□□ -0.34
LITAF-208ENST00000571627 DDIT4LQ96D03 193 aa12.91□□□□□ -0.34
LITAF-208ENST00000571627 RCN3Q96D15 328 aa12.91□□□□□ -0.34
LITAF-208ENST00000571627 ZHX1-C8orf76Q96EF9 292 aa12.91□□□□□ -0.34
LITAF-208ENST00000571627 HS3ST6Q96QI5 342 aa12.91□□□□□ -0.34
LITAF-208ENST00000571627 TACO1Q9BSH4 297 aaKnown RBP12.91□□□□□ -0.34
LITAF-208ENST00000571627 ADAM19Q9H013 955 aa12.91□□□□□ -0.34
LITAF-208ENST00000571627 EFCAB1Q9HAE3 211 aa12.91□□□□□ -0.34
LITAF-208ENST00000571627 TMEM181Q9P2C4 612 aa12.91□□□□□ -0.34
LITAF-208ENST00000571627 SLC13A4Q9UKG4 626 aa12.91□□□□□ -0.34
LITAF-208ENST00000571627 ARL2BPQ9Y2Y0 163 aa12.91□□□□□ -0.34
LITAF-208ENST00000571627 PRRC2AP48634 2157 aaKnown RBP12.91□□□□□ -0.34
LITAF-208ENST00000571627 MED13LQ71F56 2210 aa12.9□□□□□ -0.34
LITAF-208ENST00000571627 ZNF208O43345 1280 aa12.9□□□□□ -0.34
LITAF-208ENST00000571627 ADAP00813 363 aa12.9□□□□□ -0.34
LITAF-208ENST00000571627 PSMB1P20618 241 aaKnown RBP12.9□□□□□ -0.34
LITAF-208ENST00000571627 CXCR1P25024 350 aa12.9□□□□□ -0.34
LITAF-208ENST00000571627 PRDX6P30041 224 aa12.9□□□□□ -0.34
LITAF-208ENST00000571627 OR3A2P47893 321 aa12.9□□□□□ -0.34
LITAF-208ENST00000571627 GZMMP51124 257 aa12.9□□□□□ -0.34
LITAF-208ENST00000571627 RABL3Q5HYI8 236 aa12.9□□□□□ -0.34
LITAF-208ENST00000571627 ERICH5Q6P6B1 374 aa12.9□□□□□ -0.34
LITAF-208ENST00000571627 CALHM3Q86XJ0 350 aa12.9□□□□□ -0.34
LITAF-208ENST00000571627 WFDC8Q8IUA0 241 aa12.9□□□□□ -0.34
LITAF-208ENST00000571627 HOPXQ9BPY8 73 aaPredicted RBP12.9□□□□□ -0.34
LITAF-208ENST00000571627 RAI1Q7Z5J4 1906 aaPredicted RBP12.9□□□□□ -0.35
LITAF-208ENST00000571627 ZNF724A8MTY0 619 aa12.89□□□□□ -0.35
LITAF-208ENST00000571627 M0QX08 132 aa12.89□□□□□ -0.35
LITAF-208ENST00000571627 AIM2O14862 343 aa12.89□□□□□ -0.35
LITAF-208ENST00000571627 DNPH1O43598 174 aa12.89□□□□□ -0.35
LITAF-208ENST00000571627 TPST1O60507 370 aa12.89□□□□□ -0.35
LITAF-208ENST00000571627 MFN2O95140 757 aa12.89□□□□□ -0.35
LITAF-208ENST00000571627 FPR1P21462 350 aa12.89□□□□□ -0.35
LITAF-208ENST00000571627 DNASE1P24855 282 aa12.89□□□□□ -0.35
LITAF-208ENST00000571627 LOXP28300 417 aaPredicted RBP12.89□□□□□ -0.35
LITAF-208ENST00000571627 SLC35A1P78382 337 aa12.89□□□□□ -0.35
LITAF-208ENST00000571627 H3F3AP84243 136 aa12.89□□□□□ -0.35
LITAF-208ENST00000571627 VEZF1Q14119 521 aa12.89□□□□□ -0.35
LITAF-208ENST00000571627 GLIPR1L2Q4G1C9 344 aa12.89□□□□□ -0.35
LITAF-208ENST00000571627 HACD2Q6Y1H2 254 aa12.89□□□□□ -0.35
LITAF-208ENST00000571627 CCDC80Q76M96 950 aa12.89□□□□□ -0.35
LITAF-208ENST00000571627 GALNT5Q7Z7M9 940 aa12.89□□□□□ -0.35
LITAF-208ENST00000571627 TREML1Q86YW5 311 aa12.89□□□□□ -0.35
LITAF-208ENST00000571627 PIGXQ8TBF5 258 aa12.89□□□□□ -0.35
LITAF-208ENST00000571627 RASSF5Q8WWW0 418 aa12.89□□□□□ -0.35
LITAF-208ENST00000571627 NINJ1Q92982 152 aa12.89□□□□□ -0.35
LITAF-208ENST00000571627 C3orf49Q96BT1 292 aa12.89□□□□□ -0.35
LITAF-208ENST00000571627 S100PBPQ96BU1 408 aa12.89□□□□□ -0.35
LITAF-208ENST00000571627 FANCFQ9NPI8 374 aa12.89□□□□□ -0.35
LITAF-208ENST00000571627 FAM53CQ9NYF3 392 aa12.89□□□□□ -0.35
LITAF-208ENST00000571627 EMC3Q9P0I2 261 aa12.89□□□□□ -0.35
LITAF-208ENST00000571627 RPS6KB2Q9UBS0 482 aa12.89□□□□□ -0.35
LITAF-208ENST00000571627 TRAPPC4Q9Y296 219 aa12.89□□□□□ -0.35
LITAF-208ENST00000571627 GPR52Q9Y2T5 361 aa12.89□□□□□ -0.35
LITAF-208ENST00000571627 IGKV3D-15A0A087WSY6 115 aa12.88□□□□□ -0.35
LITAF-208ENST00000571627 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.88□□□□□ -0.35
LITAF-208ENST00000571627 FAM220BPB1ANY3 271 aa12.88□□□□□ -0.35
LITAF-208ENST00000571627 NDUFAB1O14561 156 aa12.88□□□□□ -0.35
LITAF-208ENST00000571627 DCTN3O75935 186 aa12.88□□□□□ -0.35
LITAF-208ENST00000571627 LYZL6O75951 148 aa12.88□□□□□ -0.35
LITAF-208ENST00000571627 ATE1O95260 518 aa12.88□□□□□ -0.35
LITAF-208ENST00000571627 IGHV3-9P01782 118 aa12.88□□□□□ -0.35
LITAF-208ENST00000571627 RAF1P04049 648 aa12.88□□□□□ -0.35
LITAF-208ENST00000571627 C8BP07358 591 aa12.88□□□□□ -0.35
LITAF-208ENST00000571627 PPP3CBP16298 524 aa12.88□□□□□ -0.35
LITAF-208ENST00000571627 IL32P24001 234 aa12.88□□□□□ -0.35
LITAF-208ENST00000571627 HTR2AP28223 471 aa12.88□□□□□ -0.35
LITAF-208ENST00000571627 NTF4P34130 210 aa12.88□□□□□ -0.35
LITAF-208ENST00000571627 IDUAP35475 653 aa12.88□□□□□ -0.35
LITAF-208ENST00000571627 NCALDP61601 193 aa12.88□□□□□ -0.35
LITAF-208ENST00000571627 DMTNQ08495 405 aa12.88□□□□□ -0.35
LITAF-208ENST00000571627 CEACAM7Q14002 265 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 215.1 ms