RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 PIF1Q9H611 641 aa10.81□□□□□ -0.68
SNX29-207ENST00000568949 EMCNQ9ULC0 261 aa10.81□□□□□ -0.68
SNX29-207ENST00000568949 PCDHGB4Q9UN71 923 aa10.81□□□□□ -0.68
SNX29-207ENST00000568949 SLC35A3Q9Y2D2 325 aa10.81□□□□□ -0.68
SNX29-207ENST00000568949 GRIP1Q9Y3R0 1128 aa10.81□□□□□ -0.68
SNX29-207ENST00000568949 SPEF1Q9Y4P9 236 aa10.81□□□□□ -0.68
SNX29-207ENST00000568949 TGP01266 2768 aa10.81□□□□□ -0.68
SNX29-207ENST00000568949 CENPVL1A0A0U1RR11 272 aa10.8□□□□□ -0.68
SNX29-207ENST00000568949 TMEM114B3SHH9 223 aa10.8□□□□□ -0.68
SNX29-207ENST00000568949 AZIN1O14977 448 aa10.8□□□□□ -0.68
SNX29-207ENST00000568949 ZNF208O43345 1280 aa10.8□□□□□ -0.68
SNX29-207ENST00000568949 C6orf47O95873 294 aa10.8□□□□□ -0.68
SNX29-207ENST00000568949 IGLV1-44P01699 117 aa10.8□□□□□ -0.68
SNX29-207ENST00000568949 GUSBP08236 651 aa10.8□□□□□ -0.68
SNX29-207ENST00000568949 CECR9P0C854 216 aa10.8□□□□□ -0.68
SNX29-207ENST00000568949 CREB1P16220 341 aa10.8□□□□□ -0.68
SNX29-207ENST00000568949 NPR2P20594 1047 aa10.8□□□□□ -0.68
SNX29-207ENST00000568949 HTR3AP46098 478 aa10.8□□□□□ -0.68
SNX29-207ENST00000568949 UBE2NP61088 152 aaKnown RBP10.8□□□□□ -0.68
SNX29-207ENST00000568949 CCNIQ14094 377 aa10.8□□□□□ -0.68
SNX29-207ENST00000568949 ARHGAP11BQ3KRB8 267 aa10.8□□□□□ -0.68
SNX29-207ENST00000568949 LIPMQ5VYY2 423 aa10.8□□□□□ -0.68
SNX29-207ENST00000568949 SHQ1Q6PI26 577 aaKnown RBP10.8□□□□□ -0.68
SNX29-207ENST00000568949 PAQR6Q6TCH4 344 aa10.8□□□□□ -0.68
SNX29-207ENST00000568949 AAED1Q7RTV5 226 aa10.8□□□□□ -0.68
SNX29-207ENST00000568949 TEX29Q8N6K0 151 aa10.8□□□□□ -0.68
SNX29-207ENST00000568949 ZIC4Q8N9L1 334 aa10.8□□□□□ -0.68
SNX29-207ENST00000568949 OR1K1Q8NGR3 316 aa10.8□□□□□ -0.68
SNX29-207ENST00000568949 MAGEE2Q8TD90 523 aaPredicted RBP10.8□□□□□ -0.68
SNX29-207ENST00000568949 TMEM186Q96B77 213 aa10.8□□□□□ -0.68
SNX29-207ENST00000568949 COQ8BQ96D53 544 aa10.8□□□□□ -0.68
SNX29-207ENST00000568949 ANKRD27Q96NW4 1050 aa10.8□□□□□ -0.68
SNX29-207ENST00000568949 SF3B5Q9BWJ5 86 aaKnown RBP10.8□□□□□ -0.68
SNX29-207ENST00000568949 ZNF350Q9GZX5 532 aa10.8□□□□□ -0.68
SNX29-207ENST00000568949 ZNF696Q9H7X3 374 aa10.8□□□□□ -0.68
SNX29-207ENST00000568949 ATAD3AQ9NVI7 634 aa10.8□□□□□ -0.68
SNX29-207ENST00000568949 HIF1ANQ9NWT6 349 aa10.8□□□□□ -0.68
SNX29-207ENST00000568949 MKLN1Q9UL63 735 aa10.8□□□□□ -0.68
SNX29-207ENST00000568949 TMEM129A0AVI4 362 aa10.79□□□□□ -0.68
SNX29-207ENST00000568949 GLRA3O75311 464 aa10.79□□□□□ -0.68
SNX29-207ENST00000568949 CHEK2O96017 543 aa10.79□□□□□ -0.68
SNX29-207ENST00000568949 MSMBP08118 114 aa10.79□□□□□ -0.68
SNX29-207ENST00000568949 IGFBP1P08833 259 aaPredicted RBP10.79□□□□□ -0.68
SNX29-207ENST00000568949 ABHD2P08910 425 aa10.79□□□□□ -0.68
SNX29-207ENST00000568949 LINC00032P0C843 101 aa10.79□□□□□ -0.68
SNX29-207ENST00000568949 IMPDH2P12268 514 aa10.79□□□□□ -0.68
SNX29-207ENST00000568949 HOXB1P14653 301 aaPredicted RBP10.79□□□□□ -0.68
SNX29-207ENST00000568949 MATN1P21941 496 aa10.79□□□□□ -0.68
SNX29-207ENST00000568949 MAPK1P28482 360 aa10.79□□□□□ -0.68
SNX29-207ENST00000568949 CALCRP30988 508 aa10.79□□□□□ -0.68
SNX29-207ENST00000568949 THBS4P35443 961 aa10.79□□□□□ -0.68
SNX29-207ENST00000568949 MAP2K6P52564 334 aa10.79□□□□□ -0.68
SNX29-207ENST00000568949 POU3F1Q03052 451 aaPredicted RBP10.79□□□□□ -0.68
SNX29-207ENST00000568949 HGFACQ04756 655 aa10.79□□□□□ -0.68
SNX29-207ENST00000568949 ADRM1Q16186 407 aa10.79□□□□□ -0.68
SNX29-207ENST00000568949 GALNTL6Q49A17 601 aa10.79□□□□□ -0.68
SNX29-207ENST00000568949 EMBQ6PCB8 327 aa10.79□□□□□ -0.68
SNX29-207ENST00000568949 SPATA21Q7Z572 469 aa10.79□□□□□ -0.68
SNX29-207ENST00000568949 ZCCHC24Q8N2G6 241 aaKnown RBP10.79□□□□□ -0.68
SNX29-207ENST00000568949 SVOPLQ8N434 492 aa10.79□□□□□ -0.68
SNX29-207ENST00000568949 OR9K2Q8NGE7 335 aa10.79□□□□□ -0.68
SNX29-207ENST00000568949 BCL2L2Q92843 193 aaPredicted RBP10.79□□□□□ -0.68
SNX29-207ENST00000568949 DDIT4LQ96D03 193 aa10.79□□□□□ -0.68
SNX29-207ENST00000568949 AURKBQ96GD4 344 aaPredicted RBP10.79□□□□□ -0.68
SNX29-207ENST00000568949 PPCSQ9HAB8 311 aa10.79□□□□□ -0.68
SNX29-207ENST00000568949 DYNLRB1Q9NP97 96 aa10.79□□□□□ -0.68
SNX29-207ENST00000568949 EXOSC3Q9NQT5 275 aaKnown RBP10.79□□□□□ -0.68
SNX29-207ENST00000568949 USP22Q9UPT9 525 aa10.79□□□□□ -0.68
SNX29-207ENST00000568949 TMED7-TICAM2A0A0A6YYA0 188 aa10.78□□□□□ -0.68
SNX29-207ENST00000568949 ZNF587BE7ETH6 402 aa10.78□□□□□ -0.68
SNX29-207ENST00000568949 BCAS1O75363 584 aaPredicted RBP10.78□□□□□ -0.68
SNX29-207ENST00000568949 LYPLA1O75608 230 aaPredicted RBP10.78□□□□□ -0.68
SNX29-207ENST00000568949 KRT33AO76009 404 aa10.78□□□□□ -0.68
SNX29-207ENST00000568949 IGKV3-15P01624 115 aa10.78□□□□□ -0.68
SNX29-207ENST00000568949 TFP02787 698 aa10.78□□□□□ -0.68
SNX29-207ENST00000568949 PROCP04070 461 aa10.78□□□□□ -0.68
SNX29-207ENST00000568949 CCNA2P20248 432 aa10.78□□□□□ -0.68
SNX29-207ENST00000568949 EPHA1P21709 976 aa10.78□□□□□ -0.68
SNX29-207ENST00000568949 RYKP34925 604 aa10.78□□□□□ -0.68
SNX29-207ENST00000568949 RPS26P62854 115 aaKnown RBP10.78□□□□□ -0.68
SNX29-207ENST00000568949 IL1RL1Q01638 556 aa10.78□□□□□ -0.68
SNX29-207ENST00000568949 MAPK14Q16539 360 aa10.78□□□□□ -0.68
SNX29-207ENST00000568949 CCDC153Q494R4 210 aa10.78□□□□□ -0.68
SNX29-207ENST00000568949 FAM153CQ494X1 144 aa10.78□□□□□ -0.68
SNX29-207ENST00000568949 AWAT1Q58HT5 328 aa10.78□□□□□ -0.68
SNX29-207ENST00000568949 OTUD3Q5T2D3 398 aaPredicted RBP10.78□□□□□ -0.68
SNX29-207ENST00000568949 KANK2Q63ZY3 851 aa10.78□□□□□ -0.68
SNX29-207ENST00000568949 ARFGAP2Q8N6H7 521 aa10.78□□□□□ -0.68
SNX29-207ENST00000568949 OR5AK3PQ8NH89 298 aa10.78□□□□□ -0.68
SNX29-207ENST00000568949 CKAP2Q8WWK9 683 aa10.78□□□□□ -0.68
SNX29-207ENST00000568949 ZNF385AQ96PM9 386 aaKnown RBP10.78□□□□□ -0.68
SNX29-207ENST00000568949 PRPF18Q99633 342 aaKnown RBP10.78□□□□□ -0.68
SNX29-207ENST00000568949 RHOXF2Q9BQY4 288 aa10.78□□□□□ -0.68
SNX29-207ENST00000568949 ZNF747Q9BV97 191 aa10.78□□□□□ -0.68
SNX29-207ENST00000568949 RACGAP1Q9H0H5 632 aa10.78□□□□□ -0.68
SNX29-207ENST00000568949 SERHL2Q9H4I8 314 aa10.78□□□□□ -0.68
SNX29-207ENST00000568949 POLE3Q9NRF9 147 aa10.78□□□□□ -0.68
SNX29-207ENST00000568949 EXD2Q9NVH0 621 aa10.78□□□□□ -0.68
SNX29-207ENST00000568949 OXSMQ9NWU1 459 aa10.78□□□□□ -0.68
SNX29-207ENST00000568949 OSGIN1Q9UJX0 560 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms