RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 IGLL1P15814 213 aa3.81□□□□□ -1.8
CNOT1-209ENST00000566240 CALCRP30988 508 aa3.81□□□□□ -1.8
CNOT1-209ENST00000566240 MDH2P40926 338 aaKnown RBP3.81□□□□□ -1.8
CNOT1-209ENST00000566240 ATP5OP48047 213 aa3.81□□□□□ -1.8
CNOT1-209ENST00000566240 PLK1P53350 603 aa3.81□□□□□ -1.8
CNOT1-209ENST00000566240 PRRX1P54821 245 aa3.81□□□□□ -1.8
CNOT1-209ENST00000566240 ENPEPQ07075 957 aa3.81□□□□□ -1.8
CNOT1-209ENST00000566240 CCDC173Q0VFZ6 552 aa3.81□□□□□ -1.8
CNOT1-209ENST00000566240 PRR4Q16378 134 aa3.81□□□□□ -1.8
CNOT1-209ENST00000566240 AANATQ16613 207 aa3.81□□□□□ -1.8
CNOT1-209ENST00000566240 SBK1Q52WX2 424 aa3.81□□□□□ -1.8
CNOT1-209ENST00000566240 OR2B11Q5JQS5 317 aa3.81□□□□□ -1.8
CNOT1-209ENST00000566240 PRAMEF20Q5VT98 475 aa3.81□□□□□ -1.8
CNOT1-209ENST00000566240 CXCL17Q6UXB2 119 aa3.81□□□□□ -1.8
CNOT1-209ENST00000566240 GSG1LQ6UXU4 331 aa3.81□□□□□ -1.8
CNOT1-209ENST00000566240 SDR9C7Q8NEX9 313 aa3.81□□□□□ -1.8
CNOT1-209ENST00000566240 OR2L3Q8NG85 312 aa3.81□□□□□ -1.8
CNOT1-209ENST00000566240 RHOXF1Q8NHV9 184 aa3.81□□□□□ -1.8
CNOT1-209ENST00000566240 NUS1Q96E22 293 aa3.81□□□□□ -1.8
CNOT1-209ENST00000566240 SEC22AQ96IW7 307 aa3.81□□□□□ -1.8
CNOT1-209ENST00000566240 IFT74Q96LB3 600 aa3.81□□□□□ -1.8
CNOT1-209ENST00000566240 C12orf42Q96LP6 360 aa3.81□□□□□ -1.8
CNOT1-209ENST00000566240 SIGLEC12Q96PQ1 595 aa3.81□□□□□ -1.8
CNOT1-209ENST00000566240 RNF126Q9BV68 326 aa3.81□□□□□ -1.8
CNOT1-209ENST00000566240 NMUR2Q9GZQ4 415 aa3.81□□□□□ -1.8
CNOT1-209ENST00000566240 NMRAL1Q9HBL8 299 aa3.81□□□□□ -1.8
CNOT1-209ENST00000566240 KLHL28Q9NXS3 571 aa3.81□□□□□ -1.8
CNOT1-209ENST00000566240 ABCG2Q9UNQ0 655 aa3.81□□□□□ -1.8
CNOT1-209ENST00000566240 CSAG2Q9Y5P2 127 aa3.81□□□□□ -1.8
CNOT1-209ENST00000566240 FLVCR1Q9Y5Y0 555 aa3.81□□□□□ -1.8
CNOT1-209ENST00000566240 RALGAPA1Q6GYQ0 2036 aa3.81□□□□□ -1.8
CNOT1-209ENST00000566240 KIAA0556O60303 1618 aa3.81□□□□□ -1.8
CNOT1-209ENST00000566240 GRIN2AQ12879 1464 aa3.8□□□□□ -1.8
CNOT1-209ENST00000566240 FHOD3Q2V2M9 1422 aa3.8□□□□□ -1.8
CNOT1-209ENST00000566240 CASKIN1Q8WXD9 1431 aa3.8□□□□□ -1.8
CNOT1-209ENST00000566240 IGLV8-61A0A075B6I0 122 aa3.8□□□□□ -1.8
CNOT1-209ENST00000566240 A0A1B0GU03 582 aa3.8□□□□□ -1.8
CNOT1-209ENST00000566240 AGTP01019 485 aa3.8□□□□□ -1.8
CNOT1-209ENST00000566240 CST1P01037 141 aa3.8□□□□□ -1.8
CNOT1-209ENST00000566240 OR8U8P0C7N1 319 aa3.8□□□□□ -1.8
CNOT1-209ENST00000566240 TROVE2P10155 538 aaKnown RBP eCLIP3.8□□□□□ -1.8
CNOT1-209ENST00000566240 MCF2P10911 925 aa3.8□□□□□ -1.8
CNOT1-209ENST00000566240 GATA1P15976 413 aaPredicted RBP3.8□□□□□ -1.8
CNOT1-209ENST00000566240 FASP25445 335 aa3.8□□□□□ -1.8
CNOT1-209ENST00000566240 UGT1A3P35503 534 aa3.8□□□□□ -1.8
CNOT1-209ENST00000566240 DDOSTP39656 456 aa3.8□□□□□ -1.8
CNOT1-209ENST00000566240 OPRD1P41143 372 aa3.8□□□□□ -1.8
CNOT1-209ENST00000566240 CRYBB2P43320 205 aa3.8□□□□□ -1.8
CNOT1-209ENST00000566240 BIDP55957 195 aa3.8□□□□□ -1.8
CNOT1-209ENST00000566240 ASPHQ12797 758 aa3.8□□□□□ -1.8
CNOT1-209ENST00000566240 OXA1LQ15070 435 aa3.8□□□□□ -1.8
CNOT1-209ENST00000566240 LRRC36Q1X8D7 754 aa3.8□□□□□ -1.8
CNOT1-209ENST00000566240 GSG1Q2KHT4 349 aa3.8□□□□□ -1.8
CNOT1-209ENST00000566240 ISXQ2M1V0 245 aa3.8□□□□□ -1.8
CNOT1-209ENST00000566240 C15orf32Q32M92 178 aa3.8□□□□□ -1.8
CNOT1-209ENST00000566240 BCL7AQ4VC05 210 aa3.8□□□□□ -1.8
CNOT1-209ENST00000566240 CARD16Q5EG05 197 aa3.8□□□□□ -1.8
CNOT1-209ENST00000566240 PAGE2BQ5JRK9 111 aa3.8□□□□□ -1.8
CNOT1-209ENST00000566240 ATAD3CQ5T2N8 411 aa3.8□□□□□ -1.8
CNOT1-209ENST00000566240 RNASEKQ6P5S7 137 aaKnown RBP3.8□□□□□ -1.8
CNOT1-209ENST00000566240 ACOT7LQ6ZUV0 252 aa3.8□□□□□ -1.8
CNOT1-209ENST00000566240 FRA10AC1Q70Z53 315 aa3.8□□□□□ -1.8
CNOT1-209ENST00000566240 GTSCR1Q86UQ5 136 aa3.8□□□□□ -1.8
CNOT1-209ENST00000566240 GPR137CQ8N3F9 429 aa3.8□□□□□ -1.8
CNOT1-209ENST00000566240 KLHL30-AS1Q8NEE0 82 aa3.8□□□□□ -1.8
CNOT1-209ENST00000566240 UFD1Q92890 307 aa3.8□□□□□ -1.8
CNOT1-209ENST00000566240 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.8□□□□□ -1.8
CNOT1-209ENST00000566240 VSIG2Q96IQ7 327 aa3.8□□□□□ -1.8
CNOT1-209ENST00000566240 ZNF641Q96N77 438 aaPredicted RBP3.8□□□□□ -1.8
CNOT1-209ENST00000566240 GAL3ST1Q99999 423 aa3.8□□□□□ -1.8
CNOT1-209ENST00000566240 PPA2Q9H2U2 334 aa3.8□□□□□ -1.8
CNOT1-209ENST00000566240 RBKSQ9H477 322 aa3.8□□□□□ -1.8
CNOT1-209ENST00000566240 NIPAL2Q9H841 368 aa3.8□□□□□ -1.8
CNOT1-209ENST00000566240 NT5MQ9NPB1 228 aa3.8□□□□□ -1.8
CNOT1-209ENST00000566240 THUMPD1Q9NXG2 353 aaKnown RBP3.8□□□□□ -1.8
CNOT1-209ENST00000566240 IKZF2Q9UKS7 526 aa3.8□□□□□ -1.8
CNOT1-209ENST00000566240 TMCO1Q9UM00 188 aa3.8□□□□□ -1.8
CNOT1-209ENST00000566240 PEX16Q9Y5Y5 336 aa3.8□□□□□ -1.8
CNOT1-209ENST00000566240 RAPGEF6Q8TEU7 1601 aa3.8□□□□□ -1.8
CNOT1-209ENST00000566240 MTUS2Q5JR59 1369 aa3.79□□□□□ -1.8
CNOT1-209ENST00000566240 CHD1O14646 1710 aa3.79□□□□□ -1.8
CNOT1-209ENST00000566240 HIP1O00291 1037 aa3.79□□□□□ -1.8
CNOT1-209ENST00000566240 WWP2O00308 870 aa3.79□□□□□ -1.8
CNOT1-209ENST00000566240 DCTN6O00399 190 aa3.79□□□□□ -1.8
CNOT1-209ENST00000566240 ABCD4O14678 606 aa3.79□□□□□ -1.8
CNOT1-209ENST00000566240 HSD17B6O14756 317 aa3.79□□□□□ -1.8
CNOT1-209ENST00000566240 RNF13O43567 381 aa3.79□□□□□ -1.8
CNOT1-209ENST00000566240 UGT1A9O60656 530 aa3.79□□□□□ -1.8
CNOT1-209ENST00000566240 CRLF1O75462 422 aa3.79□□□□□ -1.8
CNOT1-209ENST00000566240 OXSR1O95747 527 aaPredicted RBP3.79□□□□□ -1.8
CNOT1-209ENST00000566240 CRYGBP07316 175 aa3.79□□□□□ -1.8
CNOT1-209ENST00000566240 PABPC4LP0CB38 370 aaKnown RBP3.79□□□□□ -1.8
CNOT1-209ENST00000566240 GATA2P23769 480 aaPredicted RBP3.79□□□□□ -1.8
CNOT1-209ENST00000566240 HTR1FP30939 366 aa3.79□□□□□ -1.8
CNOT1-209ENST00000566240 BCL2L1Q07817 233 aa3.79□□□□□ -1.8
CNOT1-209ENST00000566240 ARL6IP1Q15041 203 aa3.79□□□□□ -1.8
CNOT1-209ENST00000566240 PPP1R7Q15435 360 aa3.79□□□□□ -1.8
CNOT1-209ENST00000566240 LPAL2Q16609 132 aa3.79□□□□□ -1.8
CNOT1-209ENST00000566240 GPRC6AQ5T6X5 926 aa3.79□□□□□ -1.8
CNOT1-209ENST00000566240 MARC1Q5VT66 337 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms