RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 MAGEA8P43361 318 aa11.12□□□□□ -0.63
RNF40-208ENST00000565995 RPL14P50914 215 aaKnown RBP11.12□□□□□ -0.63
RNF40-208ENST00000565995 SEC24CP53992 1094 aa11.12□□□□□ -0.63
RNF40-208ENST00000565995 PRPS1P60891 318 aa11.12□□□□□ -0.63
RNF40-208ENST00000565995 SNRPD2P62316 118 aaKnown RBP11.12□□□□□ -0.63
RNF40-208ENST00000565995 TGFBR3Q03167 851 aa11.12□□□□□ -0.63
RNF40-208ENST00000565995 MERTKQ12866 999 aa11.12□□□□□ -0.63
RNF40-208ENST00000565995 EFNB3Q15768 340 aa11.12□□□□□ -0.63
RNF40-208ENST00000565995 PDCD2Q16342 344 aaPredicted RBP11.12□□□□□ -0.63
RNF40-208ENST00000565995 CLEC6AQ6EIG7 209 aa11.12□□□□□ -0.63
RNF40-208ENST00000565995 UGT2A3Q6UWM9 527 aa11.12□□□□□ -0.63
RNF40-208ENST00000565995 C12orf54Q6X4T0 127 aa11.12□□□□□ -0.63
RNF40-208ENST00000565995 CPLX4Q7Z7G2 160 aa11.12□□□□□ -0.63
RNF40-208ENST00000565995 OR52E4Q8NGH9 312 aa11.12□□□□□ -0.63
RNF40-208ENST00000565995 CLHC1Q8NHS4 586 aa11.12□□□□□ -0.63
RNF40-208ENST00000565995 COQ8BQ96D53 544 aa11.12□□□□□ -0.63
RNF40-208ENST00000565995 THOC1Q96FV9 657 aaKnown RBP11.12□□□□□ -0.63
RNF40-208ENST00000565995 ARL5BQ96KC2 179 aa11.12□□□□□ -0.63
RNF40-208ENST00000565995 OR7D2Q96RA2 312 aa11.12□□□□□ -0.63
RNF40-208ENST00000565995 BHLHE41Q9C0J9 482 aaPredicted RBP11.12□□□□□ -0.63
RNF40-208ENST00000565995 BPESC1Q9GZL8 116 aa11.12□□□□□ -0.63
RNF40-208ENST00000565995 C20orf27Q9GZN8 174 aa11.12□□□□□ -0.63
RNF40-208ENST00000565995 PLK3Q9H4B4 646 aa11.12□□□□□ -0.63
RNF40-208ENST00000565995 RABEP2Q9H5N1 569 aa11.12□□□□□ -0.63
RNF40-208ENST00000565995 OBP2BQ9NPH6 170 aa11.12□□□□□ -0.63
RNF40-208ENST00000565995 SLC7A10Q9NS82 523 aa11.12□□□□□ -0.63
RNF40-208ENST00000565995 PNPOQ9NVS9 261 aa11.12□□□□□ -0.63
RNF40-208ENST00000565995 CHRNA9Q9UGM1 479 aa11.12□□□□□ -0.63
RNF40-208ENST00000565995 MOKQ9UQ07 419 aa11.12□□□□□ -0.63
RNF40-208ENST00000565995 FLVCR1Q9Y5Y0 555 aa11.12□□□□□ -0.63
RNF40-208ENST00000565995 SPIN1Q9Y657 262 aaPredicted RBP11.12□□□□□ -0.63
RNF40-208ENST00000565995 GMNCA6NCL1 334 aa11.11□□□□□ -0.63
RNF40-208ENST00000565995 DUXAA6NLW8 204 aa11.11□□□□□ -0.63
RNF40-208ENST00000565995 LILRA1O75019 489 aa11.11□□□□□ -0.63
RNF40-208ENST00000565995 UGT2B17O75795 530 aa11.11□□□□□ -0.63
RNF40-208ENST00000565995 STAMBPO95630 424 aa11.11□□□□□ -0.63
RNF40-208ENST00000565995 WNT11O96014 354 aa11.11□□□□□ -0.63
RNF40-208ENST00000565995 AK1P00568 194 aa11.11□□□□□ -0.63
RNF40-208ENST00000565995 FGF4P08620 206 aa11.11□□□□□ -0.63
RNF40-208ENST00000565995 LAMP1P11279 417 aa11.11□□□□□ -0.63
RNF40-208ENST00000565995 MPGP29372 298 aa11.11□□□□□ -0.63
RNF40-208ENST00000565995 PGM1P36871 562 aa11.11□□□□□ -0.63
RNF40-208ENST00000565995 PPOXP50336 477 aa11.11□□□□□ -0.63
RNF40-208ENST00000565995 RPL38P63173 70 aaKnown RBP11.11□□□□□ -0.63
RNF40-208ENST00000565995 SF3A3Q12874 501 aaKnown RBP eCLIP11.11□□□□□ -0.63
RNF40-208ENST00000565995 TP53BP2Q13625 1128 aa11.11□□□□□ -0.63
RNF40-208ENST00000565995 ARHGAP11BQ3KRB8 267 aa11.11□□□□□ -0.63
RNF40-208ENST00000565995 LSM12Q3MHD2 195 aaKnown RBP11.11□□□□□ -0.63
RNF40-208ENST00000565995 C3orf36Q3SXR2 165 aa11.11□□□□□ -0.63
RNF40-208ENST00000565995 IQCCQ4KMZ1 466 aa11.11□□□□□ -0.63
RNF40-208ENST00000565995 KANK2Q63ZY3 851 aa11.11□□□□□ -0.63
RNF40-208ENST00000565995 ADGRG3Q86Y34 549 aa11.11□□□□□ -0.63
RNF40-208ENST00000565995 CCDC103Q8IW40 242 aa11.11□□□□□ -0.63
RNF40-208ENST00000565995 DDIASQ8IXT1 998 aa11.11□□□□□ -0.63
RNF40-208ENST00000565995 TMCO5AQ8N6Q1 288 aa11.11□□□□□ -0.63
RNF40-208ENST00000565995 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.11□□□□□ -0.63
RNF40-208ENST00000565995 LINC01356Q8N9X3 169 aa11.11□□□□□ -0.63
RNF40-208ENST00000565995 OR7A2PQ8NGA2 310 aa11.11□□□□□ -0.63
RNF40-208ENST00000565995 TMEM45BQ96B21 275 aa11.11□□□□□ -0.63
RNF40-208ENST00000565995 C3orf49Q96BT1 292 aa11.11□□□□□ -0.63
RNF40-208ENST00000565995 PPP1R36Q96LQ0 422 aa11.11□□□□□ -0.63
RNF40-208ENST00000565995 PIF1Q9H611 641 aa11.11□□□□□ -0.63
RNF40-208ENST00000565995 NPHS2Q9NP85 383 aa11.11□□□□□ -0.63
RNF40-208ENST00000565995 CTPS2Q9NRF8 586 aa11.11□□□□□ -0.63
RNF40-208ENST00000565995 TMEM181Q9P2C4 612 aa11.11□□□□□ -0.63
RNF40-208ENST00000565995 CRNNQ9UBG3 495 aaPredicted RBP11.11□□□□□ -0.63
RNF40-208ENST00000565995 ZDHHC2Q9UIJ5 367 aa11.11□□□□□ -0.63
RNF40-208ENST00000565995 SLC9A8Q9Y2E8 581 aa11.11□□□□□ -0.63
RNF40-208ENST00000565995 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.11□□□□□ -0.63
RNF40-208ENST00000565995 DNAJC15Q9Y5T4 150 aa11.11□□□□□ -0.63
RNF40-208ENST00000565995 FCMRO60667 390 aa11.1□□□□□ -0.63
RNF40-208ENST00000565995 EIF1BO60739 113 aaKnown RBP11.1□□□□□ -0.63
RNF40-208ENST00000565995 STX11O75558 287 aa11.1□□□□□ -0.63
RNF40-208ENST00000565995 CSTAP01040 98 aa11.1□□□□□ -0.63
RNF40-208ENST00000565995 EGR1P18146 543 aa11.1□□□□□ -0.63
RNF40-208ENST00000565995 HPCAL1P37235 193 aa11.1□□□□□ -0.63
RNF40-208ENST00000565995 IDH3GP51553 393 aaPredicted RBP11.1□□□□□ -0.63
RNF40-208ENST00000565995 CCR4P51679 360 aa11.1□□□□□ -0.63
RNF40-208ENST00000565995 CHN2P52757 468 aa11.1□□□□□ -0.63
RNF40-208ENST00000565995 CBX1P83916 185 aa11.1□□□□□ -0.63
RNF40-208ENST00000565995 SLC17A1Q14916 467 aa11.1□□□□□ -0.63
RNF40-208ENST00000565995 ADIPOQQ15848 244 aa11.1□□□□□ -0.63
RNF40-208ENST00000565995 UGT3A2Q3SY77 523 aa11.1□□□□□ -0.63
RNF40-208ENST00000565995 TSPO2Q5TGU0 170 aa11.1□□□□□ -0.63
RNF40-208ENST00000565995 EIF3MQ7L2H7 374 aaKnown RBP11.1□□□□□ -0.63
RNF40-208ENST00000565995 GRINAQ7Z429 371 aa11.1□□□□□ -0.63
RNF40-208ENST00000565995 ZNF614Q8N883 585 aa11.1□□□□□ -0.63
RNF40-208ENST00000565995 SEMA6DQ8NFY4 1073 aa11.1□□□□□ -0.63
RNF40-208ENST00000565995 TWIST2Q8WVJ9 160 aa11.1□□□□□ -0.63
RNF40-208ENST00000565995 ZMYND19Q96E35 227 aaPredicted RBP11.1□□□□□ -0.63
RNF40-208ENST00000565995 ZNF317Q96PQ6 595 aaPredicted RBP11.1□□□□□ -0.63
RNF40-208ENST00000565995 KATNB1Q9BVA0 655 aa11.1□□□□□ -0.63
RNF40-208ENST00000565995 SAP130Q9H0E3 1048 aa11.1□□□□□ -0.63
RNF40-208ENST00000565995 CA10Q9NS85 328 aa11.1□□□□□ -0.63
RNF40-208ENST00000565995 ATAD3AQ9NVI7 634 aa11.1□□□□□ -0.63
RNF40-208ENST00000565995 UPB1Q9UBR1 384 aa11.1□□□□□ -0.63
RNF40-208ENST00000565995 USH1CQ9Y6N9 552 aa11.1□□□□□ -0.63
RNF40-208ENST00000565995 IGHV1-18A0A0C4DH31 117 aa11.09□□□□□ -0.63
RNF40-208ENST00000565995 A0A0G2JND7 137 aa11.09□□□□□ -0.63
RNF40-208ENST00000565995 CENPVL1A0A0U1RR11 272 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms