RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 ADPRHL2Q9NX46 363 aa5.65□□□□□ -1.5
TCF4-228ENST00000565393 THUMPD1Q9NXG2 353 aaKnown RBP5.65□□□□□ -1.5
TCF4-228ENST00000565393 RPS6KB2Q9UBS0 482 aa5.65□□□□□ -1.5
TCF4-228ENST00000565393 GDF2Q9UK05 429 aaPredicted RBP5.65□□□□□ -1.5
TCF4-228ENST00000565393 IFT52Q9Y366 437 aa5.65□□□□□ -1.5
TCF4-228ENST00000565393 DNAJC13O75165 2243 aa5.64□□□□□ -1.51
TCF4-228ENST00000565393 CACNA1CQ13936 2221 aa5.64□□□□□ -1.51
TCF4-228ENST00000565393 LIPT2A6NK58 231 aa5.64□□□□□ -1.51
TCF4-228ENST00000565393 A8MVM7 634 aa5.64□□□□□ -1.51
TCF4-228ENST00000565393 SHISA9B4DS77 424 aa5.64□□□□□ -1.51
TCF4-228ENST00000565393 E7EQL1 145 aa5.64□□□□□ -1.51
TCF4-228ENST00000565393 CLIC1O00299 241 aa5.64□□□□□ -1.51
TCF4-228ENST00000565393 FAAHO00519 579 aa5.64□□□□□ -1.51
TCF4-228ENST00000565393 CD8AP01732 235 aa5.64□□□□□ -1.51
TCF4-228ENST00000565393 BMP4P12644 408 aa5.64□□□□□ -1.51
TCF4-228ENST00000565393 CD40P25942 277 aa5.64□□□□□ -1.51
TCF4-228ENST00000565393 TTKP33981 857 aa5.64□□□□□ -1.51
TCF4-228ENST00000565393 ACAA2P42765 397 aaKnown RBP5.64□□□□□ -1.51
TCF4-228ENST00000565393 NUDT6P53370 316 aa5.64□□□□□ -1.51
TCF4-228ENST00000565393 SLC16A1P53985 500 aa5.64□□□□□ -1.51
TCF4-228ENST00000565393 CDH11P55287 796 aa5.64□□□□□ -1.51
TCF4-228ENST00000565393 FOXG1P55316 489 aaPredicted RBP5.64□□□□□ -1.51
TCF4-228ENST00000565393 PRPS1P60891 318 aa5.64□□□□□ -1.51
TCF4-228ENST00000565393 STX1BP61266 288 aa5.64□□□□□ -1.51
TCF4-228ENST00000565393 IL1RL1Q01638 556 aa5.64□□□□□ -1.51
TCF4-228ENST00000565393 CHRNB3Q05901 458 aa5.64□□□□□ -1.51
TCF4-228ENST00000565393 RGNQ15493 299 aa5.64□□□□□ -1.51
TCF4-228ENST00000565393 ETFDHQ16134 617 aa5.64□□□□□ -1.51
TCF4-228ENST00000565393 ZSWIM7Q19AV6 140 aa5.64□□□□□ -1.51
TCF4-228ENST00000565393 GTDC1Q4AE62 458 aa5.64□□□□□ -1.51
TCF4-228ENST00000565393 RPS26P11Q5JNZ5 115 aaPredicted RBP5.64□□□□□ -1.51
TCF4-228ENST00000565393 ABLIM2Q6H8Q1 611 aa5.64□□□□□ -1.51
TCF4-228ENST00000565393 SLC2A7Q6PXP3 512 aa5.64□□□□□ -1.51
TCF4-228ENST00000565393 PAQR6Q6TCH4 344 aa5.64□□□□□ -1.51
TCF4-228ENST00000565393 KLHL24Q6TFL4 600 aa5.64□□□□□ -1.51
TCF4-228ENST00000565393 EPGNQ6UW88 154 aa5.64□□□□□ -1.51
TCF4-228ENST00000565393 ZNF836Q6ZNA1 936 aa5.64□□□□□ -1.51
TCF4-228ENST00000565393 ABHD12BQ7Z5M8 362 aaPredicted RBP5.64□□□□□ -1.51
TCF4-228ENST00000565393 LSRQ86X29 649 aaPredicted RBP5.64□□□□□ -1.51
TCF4-228ENST00000565393 KDM8Q8N371 416 aa5.64□□□□□ -1.51
TCF4-228ENST00000565393 OR9K2Q8NGE7 335 aa5.64□□□□□ -1.51
TCF4-228ENST00000565393 HTRA1Q92743 480 aa5.64□□□□□ -1.51
TCF4-228ENST00000565393 MAELQ96JY0 434 aaKnown RBP5.64□□□□□ -1.51
TCF4-228ENST00000565393 OR52B2Q96RD2 323 aa5.64□□□□□ -1.51
TCF4-228ENST00000565393 DHRS9Q9BPW9 319 aa5.64□□□□□ -1.51
TCF4-228ENST00000565393 TRAF4Q9BUZ4 470 aaPredicted RBP5.64□□□□□ -1.51
TCF4-228ENST00000565393 SF3B5Q9BWJ5 86 aaKnown RBP5.64□□□□□ -1.51
TCF4-228ENST00000565393 SPATA9Q9BWV2 254 aa5.64□□□□□ -1.51
TCF4-228ENST00000565393 SLCO5A1Q9H2Y9 848 aa5.64□□□□□ -1.51
TCF4-228ENST00000565393 FKRPQ9H9S5 495 aa5.64□□□□□ -1.51
TCF4-228ENST00000565393 SDR39U1Q9NRG7 319 aaPredicted RBP5.64□□□□□ -1.51
TCF4-228ENST00000565393 CBLN4Q9NTU7 201 aa5.64□□□□□ -1.51
TCF4-228ENST00000565393 TMEM45AQ9NWC5 275 aa5.64□□□□□ -1.51
TCF4-228ENST00000565393 NPAP1Q9NZP6 1156 aa5.64□□□□□ -1.51
TCF4-228ENST00000565393 ZIM2Q9NZV7 527 aa5.64□□□□□ -1.51
TCF4-228ENST00000565393 PRDM4Q9UKN5 801 aa5.64□□□□□ -1.51
TCF4-228ENST00000565393 ZNF443Q9Y2A4 671 aaPredicted RBP5.64□□□□□ -1.51
TCF4-228ENST00000565393 B3GALT5Q9Y2C3 310 aa5.64□□□□□ -1.51
TCF4-228ENST00000565393 SLC9A8Q9Y2E8 581 aa5.64□□□□□ -1.51
TCF4-228ENST00000565393 PCDHB14Q9Y5E9 798 aa5.64□□□□□ -1.51
TCF4-228ENST00000565393 FLVCR1Q9Y5Y0 555 aa5.64□□□□□ -1.51
TCF4-228ENST00000565393 SLC25A15Q9Y619 301 aa5.64□□□□□ -1.51
TCF4-228ENST00000565393 USH1CQ9Y6N9 552 aa5.64□□□□□ -1.51
TCF4-228ENST00000565393 CENPEQ02224 2701 aa5.64□□□□□ -1.51
TCF4-228ENST00000565393 ARHGAP21Q5T5U3 1957 aa5.64□□□□□ -1.51
TCF4-228ENST00000565393 CRYBG3Q68DQ2 2970 aa5.64□□□□□ -1.51
TCF4-228ENST00000565393 INTS1Q8N201 2190 aaKnown RBP5.63□□□□□ -1.51
TCF4-228ENST00000565393 OTOGQ6ZRI0 2925 aa5.63□□□□□ -1.51
TCF4-228ENST00000565393 CSMD1Q96PZ7 3565 aa5.63□□□□□ -1.51
TCF4-228ENST00000565393 CDHR4A6H8M9 788 aa5.63□□□□□ -1.51
TCF4-228ENST00000565393 ELOA3DA6NLF2 546 aaPredicted RBP5.63□□□□□ -1.51
TCF4-228ENST00000565393 VAMP5O95183 116 aa5.63□□□□□ -1.51
TCF4-228ENST00000565393 WNT11O96014 354 aa5.63□□□□□ -1.51
TCF4-228ENST00000565393 IGHV4-39P01824 125 aa5.63□□□□□ -1.51
TCF4-228ENST00000565393 THBS1P07996 1170 aa5.63□□□□□ -1.51
TCF4-228ENST00000565393 ITGA5P08648 1049 aa5.63□□□□□ -1.51
TCF4-228ENST00000565393 NUDT7P0C024 238 aa5.63□□□□□ -1.51
TCF4-228ENST00000565393 PRG2P13727 222 aa5.63□□□□□ -1.51
TCF4-228ENST00000565393 COX5AP20674 150 aa5.63□□□□□ -1.51
TCF4-228ENST00000565393 RPS4Y1P22090 263 aaKnown RBP5.63□□□□□ -1.51
TCF4-228ENST00000565393 GTF2E2P29084 291 aaKnown RBP5.63□□□□□ -1.51
TCF4-228ENST00000565393 MPGP29372 298 aa5.63□□□□□ -1.51
TCF4-228ENST00000565393 RPS5P46782 204 aaKnown RBP5.63□□□□□ -1.51
TCF4-228ENST00000565393 IDH3AP50213 366 aa5.63□□□□□ -1.51
TCF4-228ENST00000565393 MVDP53602 400 aa5.63□□□□□ -1.51
TCF4-228ENST00000565393 UBE2NP61088 152 aaKnown RBP5.63□□□□□ -1.51
TCF4-228ENST00000565393 HOXC5Q00444 222 aa5.63□□□□□ -1.51
TCF4-228ENST00000565393 PLAURQ03405 335 aa5.63□□□□□ -1.51
TCF4-228ENST00000565393 SPOCK1Q08629 439 aa5.63□□□□□ -1.51
TCF4-228ENST00000565393 C1DQ13901 141 aaKnown RBP5.63□□□□□ -1.51
TCF4-228ENST00000565393 MAPK11Q15759 364 aa5.63□□□□□ -1.51
TCF4-228ENST00000565393 NRF1Q16656 503 aa5.63□□□□□ -1.51
TCF4-228ENST00000565393 ELOA3BQ3SY89 546 aa5.63□□□□□ -1.51
TCF4-228ENST00000565393 C1orf140Q5VVS0 124 aa5.63□□□□□ -1.51
TCF4-228ENST00000565393 PRAMEF8Q5VWM4 474 aa5.63□□□□□ -1.51
TCF4-228ENST00000565393 PRAMEF7Q5VXH5 474 aa5.63□□□□□ -1.51
TCF4-228ENST00000565393 NIPAL3Q6P499 406 aa5.63□□□□□ -1.51
TCF4-228ENST00000565393 CLEC2AQ6UVW9 174 aa5.63□□□□□ -1.51
TCF4-228ENST00000565393 SEZ6L2Q6UXD5 910 aa5.63□□□□□ -1.51
TCF4-228ENST00000565393 MAVSQ7Z434 540 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms