RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 ZNF367Q7RTV3 350 aa17.76■□□□□ 0.43
CLN6-205ENST00000564846 TMPRSS12Q86WS5 348 aa17.76■□□□□ 0.43
CLN6-205ENST00000564846 ADGRG3Q86Y34 549 aa17.76■□□□□ 0.43
CLN6-205ENST00000564846 OR52I1Q8NGK6 324 aa17.76■□□□□ 0.43
CLN6-205ENST00000564846 LGALS12Q96DT0 336 aa17.76■□□□□ 0.43
CLN6-205ENST00000564846 MOGAT1Q96PD6 335 aa17.76■□□□□ 0.43
CLN6-205ENST00000564846 GPX7Q96SL4 187 aaPredicted RBP17.76■□□□□ 0.43
CLN6-205ENST00000564846 FKRPQ9H9S5 495 aa17.76■□□□□ 0.43
CLN6-205ENST00000564846 FGF20Q9NP95 211 aaPredicted RBP17.76■□□□□ 0.43
CLN6-205ENST00000564846 P4HTMQ9NXG6 502 aa17.76■□□□□ 0.43
CLN6-205ENST00000564846 MED11Q9P086 117 aa17.76■□□□□ 0.43
CLN6-205ENST00000564846 ERGIC3Q9Y282 383 aa17.76■□□□□ 0.43
CLN6-205ENST00000564846 SDK2Q58EX2 2172 aa17.76■□□□□ 0.43
CLN6-205ENST00000564846 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.76■□□□□ 0.43
CLN6-205ENST00000564846 PTHP01270 115 aa17.76■□□□□ 0.43
CLN6-205ENST00000564846 ADRA2AP08913 450 aa17.76■□□□□ 0.43
CLN6-205ENST00000564846 ZNF3P17036 446 aa17.76■□□□□ 0.43
CLN6-205ENST00000564846 F8A1P23610 371 aa17.76■□□□□ 0.43
CLN6-205ENST00000564846 RPL4P36578 427 aaKnown RBP17.76■□□□□ 0.43
CLN6-205ENST00000564846 LIMK1P53667 647 aa17.76■□□□□ 0.43
CLN6-205ENST00000564846 ZNF362Q5T0B9 420 aaPredicted RBP17.76■□□□□ 0.43
CLN6-205ENST00000564846 FCRLBQ6BAA4 426 aa17.76■□□□□ 0.43
CLN6-205ENST00000564846 PLBD1Q6P4A8 553 aa17.76■□□□□ 0.43
CLN6-205ENST00000564846 POMZP3Q6PJE2 187 aa17.76■□□□□ 0.43
CLN6-205ENST00000564846 IL20RBQ6UXL0 311 aa17.76■□□□□ 0.43
CLN6-205ENST00000564846 ANKRD13BQ86YJ7 626 aa17.76■□□□□ 0.43
CLN6-205ENST00000564846 STK35Q8TDR2 534 aa17.76■□□□□ 0.43
CLN6-205ENST00000564846 TAAR8Q969N4 342 aa17.76■□□□□ 0.43
CLN6-205ENST00000564846 YIPF6Q96EC8 236 aa17.76■□□□□ 0.43
CLN6-205ENST00000564846 ERMAPQ96PL5 475 aaPredicted RBP17.76■□□□□ 0.43
CLN6-205ENST00000564846 NDEL1Q9GZM8 345 aa17.76■□□□□ 0.43
CLN6-205ENST00000564846 NAA50Q9GZZ1 169 aaKnown RBP17.76■□□□□ 0.43
CLN6-205ENST00000564846 NRIP3Q9NQ35 241 aa17.76■□□□□ 0.43
CLN6-205ENST00000564846 CHRNA9Q9UGM1 479 aa17.76■□□□□ 0.43
CLN6-205ENST00000564846 MCIDASD6RGH6 385 aa17.75■□□□□ 0.43
CLN6-205ENST00000564846 PRR23D1E9PI22 279 aaPredicted RBP17.75■□□□□ 0.43
CLN6-205ENST00000564846 H3BMQ9 156 aa17.75■□□□□ 0.43
CLN6-205ENST00000564846 ETV2O00321 342 aaPredicted RBP17.75■□□□□ 0.43
CLN6-205ENST00000564846 ARPC3O15145 178 aa17.75■□□□□ 0.43
CLN6-205ENST00000564846 NPIPB7O75200 414 aa17.75■□□□□ 0.43
CLN6-205ENST00000564846 MT-ATP6P00846 226 aa17.75■□□□□ 0.43
CLN6-205ENST00000564846 HIST1H2ABP04908 130 aa17.75■□□□□ 0.43
CLN6-205ENST00000564846 SERPINA7P05543 415 aa17.75■□□□□ 0.43
CLN6-205ENST00000564846 PRR23D2P0DMB1 279 aaPredicted RBP17.75■□□□□ 0.43
CLN6-205ENST00000564846 APOBEC1P41238 236 aaKnown RBP17.75■□□□□ 0.43
CLN6-205ENST00000564846 SH3BGRP55822 239 aaPredicted RBP17.75■□□□□ 0.43
CLN6-205ENST00000564846 TIGD6Q17RP2 521 aa17.75■□□□□ 0.43
CLN6-205ENST00000564846 HIST3H2AQ7L7L0 130 aa17.75■□□□□ 0.43
CLN6-205ENST00000564846 RAB43Q86YS6 212 aa17.75■□□□□ 0.43
CLN6-205ENST00000564846 HIST1H2ACQ93077 130 aa17.75■□□□□ 0.43
CLN6-205ENST00000564846 COG8Q96MW5 612 aa17.75■□□□□ 0.43
CLN6-205ENST00000564846 BCL7BQ9BQE9 202 aa17.75■□□□□ 0.43
CLN6-205ENST00000564846 TAPBPLQ9BX59 468 aa17.75■□□□□ 0.43
CLN6-205ENST00000564846 TAS2R16Q9NYV7 291 aa17.75■□□□□ 0.43
CLN6-205ENST00000564846 ENPP5Q9UJA9 477 aa17.75■□□□□ 0.43
CLN6-205ENST00000564846 KLHL21Q9UJP4 597 aa17.75■□□□□ 0.43
CLN6-205ENST00000564846 TMEM72A0PK05 275 aa17.74■□□□□ 0.43
CLN6-205ENST00000564846 FAM183AA6NL82 134 aa17.74■□□□□ 0.43
CLN6-205ENST00000564846 B4DXG7 233 aa17.74■□□□□ 0.43
CLN6-205ENST00000564846 IDH3BO43837 385 aa17.74■□□□□ 0.43
CLN6-205ENST00000564846 CSRP1P21291 193 aaKnown RBP17.74■□□□□ 0.43
CLN6-205ENST00000564846 PAICSP22234 425 aaKnown RBP17.74■□□□□ 0.43
CLN6-205ENST00000564846 RPS5P46782 204 aaKnown RBP17.74■□□□□ 0.43
CLN6-205ENST00000564846 ZNF41P51814 821 aaPredicted RBP17.74■□□□□ 0.43
CLN6-205ENST00000564846 MAP2K6P52564 334 aa17.74■□□□□ 0.43
CLN6-205ENST00000564846 LTBQ06643 244 aa17.74■□□□□ 0.43
CLN6-205ENST00000564846 Q0VFX4 171 aa17.74■□□□□ 0.43
CLN6-205ENST00000564846 ITGADQ13349 1161 aa17.74■□□□□ 0.43
CLN6-205ENST00000564846 TMED1Q13445 227 aa17.74■□□□□ 0.43
CLN6-205ENST00000564846 NIPAL3Q6P499 406 aa17.74■□□□□ 0.43
CLN6-205ENST00000564846 ERI1Q8IV48 349 aaKnown RBP17.74■□□□□ 0.43
CLN6-205ENST00000564846 TMEM156Q8N614 296 aa17.74■□□□□ 0.43
CLN6-205ENST00000564846 BBS1Q8NFJ9 593 aa17.74■□□□□ 0.43
CLN6-205ENST00000564846 OTULINQ96BN8 352 aa17.74■□□□□ 0.43
CLN6-205ENST00000564846 FRMD6Q96NE9 622 aa17.74■□□□□ 0.43
CLN6-205ENST00000564846 WDR70Q9NW82 654 aa17.74■□□□□ 0.43
CLN6-205ENST00000564846 SLC6A5Q9Y345 797 aa17.74■□□□□ 0.43
CLN6-205ENST00000564846 IER3IP1Q9Y5U9 82 aa17.74■□□□□ 0.43
CLN6-205ENST00000564846 LOC101059948A0A1B0GTJ6 334 aa17.74■□□□□ 0.43
CLN6-205ENST00000564846 TRIM64BA6NI03 449 aa17.74■□□□□ 0.43
CLN6-205ENST00000564846 BLOC1S5-TXNDC5H3BN57 136 aa17.74■□□□□ 0.43
CLN6-205ENST00000564846 TSPAN19P0C672 248 aa17.74■□□□□ 0.43
CLN6-205ENST00000564846 APEHP13798 732 aaKnown RBP17.74■□□□□ 0.43
CLN6-205ENST00000564846 CD82P27701 267 aa17.74■□□□□ 0.43
CLN6-205ENST00000564846 IL10RAQ13651 578 aa17.74■□□□□ 0.43
CLN6-205ENST00000564846 SLC25A53Q5H9E4 307 aa17.74■□□□□ 0.43
CLN6-205ENST00000564846 ARMC4Q5T2S8 1044 aa17.74■□□□□ 0.43
CLN6-205ENST00000564846 FAM69AQ5T7M9 428 aa17.74■□□□□ 0.43
CLN6-205ENST00000564846 H3F3CQ6NXT2 135 aa17.74■□□□□ 0.43
CLN6-205ENST00000564846 MEPCEQ7L2J0 689 aaKnown RBP17.74■□□□□ 0.43
CLN6-205ENST00000564846 NANOGNBQ7Z5D8 188 aa17.74■□□□□ 0.43
CLN6-205ENST00000564846 IGFN1Q86VF2 1251 aa17.74■□□□□ 0.43
CLN6-205ENST00000564846 PROKR2Q8NFJ6 384 aa17.74■□□□□ 0.43
CLN6-205ENST00000564846 MND1Q9BWT6 205 aa17.74■□□□□ 0.43
CLN6-205ENST00000564846 GPN2Q9H9Y4 310 aaPredicted RBP17.74■□□□□ 0.43
CLN6-205ENST00000564846 HPF1Q9NWY4 346 aa17.74■□□□□ 0.43
CLN6-205ENST00000564846 EXOGQ9Y2C4 368 aaKnown RBP17.74■□□□□ 0.43
CLN6-205ENST00000564846 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.73■□□□□ 0.43
CLN6-205ENST00000564846 OR2T1O43869 369 aa17.73■□□□□ 0.43
CLN6-205ENST00000564846 WISP1O95388 367 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms