RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 C1orf147Q96MC9 270 aaPredicted RBP8.94□□□□□ -0.98
SF3B3-204ENST00000563739 ZNF747Q9BV97 191 aa8.94□□□□□ -0.98
SF3B3-204ENST00000563739 TMEM109Q9BVC6 243 aa8.94□□□□□ -0.98
SF3B3-204ENST00000563739 ACTRT3Q9BYD9 372 aa8.94□□□□□ -0.98
SF3B3-204ENST00000563739 ROPN1BQ9BZX4 212 aaPredicted RBP8.94□□□□□ -0.98
SF3B3-204ENST00000563739 ZNF350Q9GZX5 532 aa8.94□□□□□ -0.98
SF3B3-204ENST00000563739 SAP130Q9H0E3 1048 aa8.94□□□□□ -0.98
SF3B3-204ENST00000563739 ZNF442Q9H7R0 627 aa8.94□□□□□ -0.98
SF3B3-204ENST00000563739 ROPN1Q9HAT0 212 aaPredicted RBP8.94□□□□□ -0.98
SF3B3-204ENST00000563739 LPAR2Q9HBW0 351 aa8.94□□□□□ -0.98
SF3B3-204ENST00000563739 HIF1ANQ9NWT6 349 aa8.94□□□□□ -0.98
SF3B3-204ENST00000563739 C1orf109Q9NX04 203 aa8.94□□□□□ -0.98
SF3B3-204ENST00000563739 CHRNA9Q9UGM1 479 aa8.94□□□□□ -0.98
SF3B3-204ENST00000563739 STK38LQ9Y2H1 464 aa8.94□□□□□ -0.98
SF3B3-204ENST00000563739 ZNF281Q9Y2X9 895 aa8.94□□□□□ -0.98
SF3B3-204ENST00000563739 LOC105371242A0A075B767 164 aa8.93□□□□□ -0.98
SF3B3-204ENST00000563739 ARPC4-TTLL3A0A0A6YYG9 625 aa8.93□□□□□ -0.98
SF3B3-204ENST00000563739 A0A1W2PPM1 405 aa8.93□□□□□ -0.98
SF3B3-204ENST00000563739 TLDC2A0PJX2 215 aa8.93□□□□□ -0.98
SF3B3-204ENST00000563739 TMEM72A0PK05 275 aa8.93□□□□□ -0.98
SF3B3-204ENST00000563739 CLDN24A6NM45 220 aa8.93□□□□□ -0.98
SF3B3-204ENST00000563739 hCG_2039718K7EN88 272 aa8.93□□□□□ -0.98
SF3B3-204ENST00000563739 GTPBP1O00178 669 aaKnown RBP8.93□□□□□ -0.98
SF3B3-204ENST00000563739 AP3D1O14617 1153 aa8.93□□□□□ -0.98
SF3B3-204ENST00000563739 GPR171O14626 319 aa8.93□□□□□ -0.98
SF3B3-204ENST00000563739 SCAMP2O15127 329 aaKnown RBP8.93□□□□□ -0.98
SF3B3-204ENST00000563739 GLRA3O75311 464 aa8.93□□□□□ -0.98
SF3B3-204ENST00000563739 SEC22BO75396 215 aa8.93□□□□□ -0.98
SF3B3-204ENST00000563739 RP2O75695 350 aa8.93□□□□□ -0.98
SF3B3-204ENST00000563739 C6orf47O95873 294 aa8.93□□□□□ -0.98
SF3B3-204ENST00000563739 LGI1O95970 557 aa8.93□□□□□ -0.98
SF3B3-204ENST00000563739 IGKV3-15P01624 115 aa8.93□□□□□ -0.98
SF3B3-204ENST00000563739 GSTA1P08263 222 aa8.93□□□□□ -0.98
SF3B3-204ENST00000563739 UBTFL6P0CB48 400 aaPredicted RBP8.93□□□□□ -0.98
SF3B3-204ENST00000563739 ARAFP10398 606 aa8.93□□□□□ -0.98
SF3B3-204ENST00000563739 BCKDHAP12694 445 aa8.93□□□□□ -0.98
SF3B3-204ENST00000563739 EPHA1P21709 976 aa8.93□□□□□ -0.98
SF3B3-204ENST00000563739 PRPS1P60891 318 aa8.93□□□□□ -0.98
SF3B3-204ENST00000563739 RPL38P63173 70 aaKnown RBP8.93□□□□□ -0.98
SF3B3-204ENST00000563739 IMPG1Q17R60 797 aa8.93□□□□□ -0.98
SF3B3-204ENST00000563739 ANKRD16Q6P6B7 361 aa8.93□□□□□ -0.98
SF3B3-204ENST00000563739 VHLLQ6RSH7 139 aa8.93□□□□□ -0.98
SF3B3-204ENST00000563739 RNF165Q6ZSG1 346 aa8.93□□□□□ -0.98
SF3B3-204ENST00000563739 HMGN2P46Q86SG4 172 aa8.93□□□□□ -0.98
SF3B3-204ENST00000563739 GLCCI1Q86VQ1 547 aa8.93□□□□□ -0.98
SF3B3-204ENST00000563739 CLEC4FQ8N1N0 589 aa8.93□□□□□ -0.98
SF3B3-204ENST00000563739 ZNF540Q8NDQ6 660 aa8.93□□□□□ -0.98
SF3B3-204ENST00000563739 NUP37Q8NFH4 326 aa8.93□□□□□ -0.98
SF3B3-204ENST00000563739 OR5AK3PQ8NH89 298 aa8.93□□□□□ -0.98
SF3B3-204ENST00000563739 GCDHQ92947 438 aaPredicted RBP8.93□□□□□ -0.98
SF3B3-204ENST00000563739 TMEM186Q96B77 213 aa8.93□□□□□ -0.98
SF3B3-204ENST00000563739 ZG16BQ96DA0 208 aa8.93□□□□□ -0.98
SF3B3-204ENST00000563739 METTL2AQ96IZ6 378 aaKnown RBP8.93□□□□□ -0.98
SF3B3-204ENST00000563739 SLC6A7Q99884 636 aa8.93□□□□□ -0.98
SF3B3-204ENST00000563739 TMPRSS13Q9BYE2 586 aa8.93□□□□□ -0.98
SF3B3-204ENST00000563739 HOXD1Q9GZZ0 328 aa8.93□□□□□ -0.98
SF3B3-204ENST00000563739 TPK1Q9H3S4 243 aa8.93□□□□□ -0.98
SF3B3-204ENST00000563739 NOX3Q9HBY0 568 aa8.93□□□□□ -0.98
SF3B3-204ENST00000563739 SH3BP4Q9P0V3 963 aa8.93□□□□□ -0.98
SF3B3-204ENST00000563739 SLC9A8Q9Y2E8 581 aa8.93□□□□□ -0.98
SF3B3-204ENST00000563739 HDGFL3Q9Y3E1 203 aa8.93□□□□□ -0.98
SF3B3-204ENST00000563739 IGHV2OR16-5A0A0B4J2B6 119 aa8.92□□□□□ -0.98
SF3B3-204ENST00000563739 TMEM233B4DJY2 109 aa8.92□□□□□ -0.98
SF3B3-204ENST00000563739 B4DSR2 109 aa8.92□□□□□ -0.98
SF3B3-204ENST00000563739 H3BQF6 201 aa8.92□□□□□ -0.98
SF3B3-204ENST00000563739 HPXP02790 462 aa8.92□□□□□ -0.98
SF3B3-204ENST00000563739 PROCP04070 461 aa8.92□□□□□ -0.98
SF3B3-204ENST00000563739 MSMBP08118 114 aa8.92□□□□□ -0.98
SF3B3-204ENST00000563739 IFNGR1P15260 489 aa8.92□□□□□ -0.98
SF3B3-204ENST00000563739 KRT4P19013 534 aa8.92□□□□□ -0.98
SF3B3-204ENST00000563739 TAC1P20366 129 aa8.92□□□□□ -0.98
SF3B3-204ENST00000563739 ATP6V1C1P21283 382 aa8.92□□□□□ -0.98
SF3B3-204ENST00000563739 TP53BP2Q13625 1128 aa8.92□□□□□ -0.98
SF3B3-204ENST00000563739 ADRM1Q16186 407 aa8.92□□□□□ -0.98
SF3B3-204ENST00000563739 C3orf36Q3SXR2 165 aa8.92□□□□□ -0.98
SF3B3-204ENST00000563739 KRT71Q3SY84 523 aa8.92□□□□□ -0.98
SF3B3-204ENST00000563739 C1QTNF12Q5T7M4 302 aa8.92□□□□□ -0.98
SF3B3-204ENST00000563739 ZYG11AQ6WRX3 759 aa8.92□□□□□ -0.98
SF3B3-204ENST00000563739 FRRS1Q6ZNA5 592 aa8.92□□□□□ -0.98
SF3B3-204ENST00000563739 SLC22A9Q8IVM8 553 aa8.92□□□□□ -0.98
SF3B3-204ENST00000563739 C4orf33Q8N1A6 199 aa8.92□□□□□ -0.98
SF3B3-204ENST00000563739 CCNYL1Q8N7R7 359 aa8.92□□□□□ -0.98
SF3B3-204ENST00000563739 UBASH3BQ8TF42 649 aa8.92□□□□□ -0.98
SF3B3-204ENST00000563739 WDR60Q8WVS4 1066 aa8.92□□□□□ -0.98
SF3B3-204ENST00000563739 NEU4Q8WWR8 484 aaPredicted RBP8.92□□□□□ -0.98
SF3B3-204ENST00000563739 TAF15Q92804 592 aaKnown RBP eCLIP8.92□□□□□ -0.98
SF3B3-204ENST00000563739 MTERF3Q96E29 417 aa8.92□□□□□ -0.98
SF3B3-204ENST00000563739 APOPT1Q96IL0 206 aa8.92□□□□□ -0.98
SF3B3-204ENST00000563739 ZNF75AQ96N20 296 aa8.92□□□□□ -0.98
SF3B3-204ENST00000563739 ZIM3Q96PE6 472 aa8.92□□□□□ -0.98
SF3B3-204ENST00000563739 ALKBH3Q96Q83 286 aaPredicted RBP8.92□□□□□ -0.98
SF3B3-204ENST00000563739 RBM4Q9BWF3 364 aaKnown RBP8.92□□□□□ -0.98
SF3B3-204ENST00000563739 C1QTNF5Q9BXJ0 243 aa8.92□□□□□ -0.98
SF3B3-204ENST00000563739 NARFLQ9H6Q4 476 aa8.92□□□□□ -0.98
SF3B3-204ENST00000563739 MED4Q9NPJ6 270 aa8.92□□□□□ -0.98
SF3B3-204ENST00000563739 MKS1Q9NXB0 559 aa8.92□□□□□ -0.98
SF3B3-204ENST00000563739 MYEF2Q9P2K5 600 aaKnown RBP8.92□□□□□ -0.98
SF3B3-204ENST00000563739 MKLN1Q9UL63 735 aa8.92□□□□□ -0.98
SF3B3-204ENST00000563739 PCDHB10Q9UN67 800 aa8.92□□□□□ -0.98
SF3B3-204ENST00000563739 H3BNH8 94 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms