RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 ESPNLQ6ZVH7 1005 aa14.01□□□□□ -0.17
USB1-208ENST00000563207 CBLL1Q75N03 491 aa14.01□□□□□ -0.17
USB1-208ENST00000563207 KIF18BQ86Y91 864 aa14.01□□□□□ -0.17
USB1-208ENST00000563207 RNF148Q8N7C7 305 aa14.01□□□□□ -0.17
USB1-208ENST00000563207 GPR32P1Q8NGA4 272 aa14.01□□□□□ -0.17
USB1-208ENST00000563207 DNAJA4Q8WW22 397 aaPredicted RBP14.01□□□□□ -0.17
USB1-208ENST00000563207 NINJ1Q92982 152 aa14.01□□□□□ -0.17
USB1-208ENST00000563207 FAM162AQ96A26 154 aa14.01□□□□□ -0.17
USB1-208ENST00000563207 SLC7A6OSQ96CW6 309 aaPredicted RBP14.01□□□□□ -0.17
USB1-208ENST00000563207 OPN3Q9H1Y3 402 aaPredicted RBP14.01□□□□□ -0.17
USB1-208ENST00000563207 TMEM27Q9HBJ8 222 aa14.01□□□□□ -0.17
USB1-208ENST00000563207 GMPR2Q9P2T1 348 aaKnown RBP14.01□□□□□ -0.17
USB1-208ENST00000563207 EGFL7Q9UHF1 273 aa14.01□□□□□ -0.17
USB1-208ENST00000563207 SAMD4AQ9UPU9 718 aaKnown RBP14.01□□□□□ -0.17
USB1-208ENST00000563207 SNX13Q9Y5W8 968 aa14.01□□□□□ -0.17
USB1-208ENST00000563207 MTORP42345 2549 aa14.01□□□□□ -0.17
USB1-208ENST00000563207 SH3D21A4FU49 640 aa14□□□□□ -0.17
USB1-208ENST00000563207 SLC22A20A6NK97 555 aa14□□□□□ -0.17
USB1-208ENST00000563207 ZNF208O43345 1280 aa14□□□□□ -0.17
USB1-208ENST00000563207 SMNDC1O75940 238 aaKnown RBP eCLIP14□□□□□ -0.172e-6■■■■□ 22.6
USB1-208ENST00000563207 PRG2P13727 222 aa14□□□□□ -0.17
USB1-208ENST00000563207 TCN1P20061 433 aaPredicted RBP14□□□□□ -0.17
USB1-208ENST00000563207 DNASE1P24855 282 aa14□□□□□ -0.17
USB1-208ENST00000563207 PEX19P40855 299 aa14□□□□□ -0.17
USB1-208ENST00000563207 KIR2DL2P43627 348 aaPredicted RBP14□□□□□ -0.17
USB1-208ENST00000563207 ADAM8P78325 824 aa14□□□□□ -0.17
USB1-208ENST00000563207 SORDQ00796 357 aa14□□□□□ -0.17
USB1-208ENST00000563207 TRIM25Q14258 630 aaKnown RBP14□□□□□ -0.17
USB1-208ENST00000563207 MTX3Q5HYI7 312 aa14□□□□□ -0.17
USB1-208ENST00000563207 ZNF474Q6S9Z5 364 aaPredicted RBP14□□□□□ -0.17
USB1-208ENST00000563207 PAMR1Q6UXH9 720 aa14□□□□□ -0.17
USB1-208ENST00000563207 CHMP1BQ7LBR1 199 aa14□□□□□ -0.17
USB1-208ENST00000563207 LILRA2Q8N149 483 aa14□□□□□ -0.17
USB1-208ENST00000563207 CNEP1R1Q8N9A8 125 aa14□□□□□ -0.17
USB1-208ENST00000563207 FNDC9Q8TBE3 224 aa14□□□□□ -0.17
USB1-208ENST00000563207 SMPDL3BQ92485 455 aa14□□□□□ -0.17
USB1-208ENST00000563207 POLR2J2Q9GZM3 115 aaKnown RBP14□□□□□ -0.17
USB1-208ENST00000563207 PCDHAC1Q9H158 963 aa14□□□□□ -0.17
USB1-208ENST00000563207 POLR2J3Q9H1A7 115 aaKnown RBP14□□□□□ -0.17
USB1-208ENST00000563207 DCAF13Q9NV06 445 aaKnown RBP14□□□□□ -0.17
USB1-208ENST00000563207 C6orf203Q9P0P8 240 aaPredicted RBP14□□□□□ -0.17
USB1-208ENST00000563207 RPS6KB2Q9UBS0 482 aa14□□□□□ -0.17
USB1-208ENST00000563207 CHRNA9Q9UGM1 479 aa14□□□□□ -0.17
USB1-208ENST00000563207 ACANP16112 2415 aa13.99□□□□□ -0.17
USB1-208ENST00000563207 TMEM229AB2RXF0 380 aa13.99□□□□□ -0.17
USB1-208ENST00000563207 ADAMDEC1O15204 470 aa13.99□□□□□ -0.17
USB1-208ENST00000563207 FRS3O43559 492 aa13.99□□□□□ -0.17
USB1-208ENST00000563207 DNAJC8O75937 253 aaPredicted RBP13.99□□□□□ -0.17
USB1-208ENST00000563207 SERPINA1P01009 418 aa13.99□□□□□ -0.17
USB1-208ENST00000563207 PNMTP11086 282 aa13.99□□□□□ -0.17
USB1-208ENST00000563207 CXCR1P25024 350 aa13.99□□□□□ -0.17
USB1-208ENST00000563207 TACR3P29371 465 aa13.99□□□□□ -0.17
USB1-208ENST00000563207 SWT1Q5T5J6 900 aaKnown RBP13.99□□□□□ -0.17
USB1-208ENST00000563207 ZNF613Q6PF04 617 aa13.99□□□□□ -0.17
USB1-208ENST00000563207 ULK3Q6PHR2 472 aa13.99□□□□□ -0.17
USB1-208ENST00000563207 P4HA3Q7Z4N8 544 aa13.99□□□□□ -0.17
USB1-208ENST00000563207 GGNQ86UU5 652 aa13.99□□□□□ -0.17
USB1-208ENST00000563207 COMTD1Q86VU5 262 aa13.99□□□□□ -0.17
USB1-208ENST00000563207 ADGRG3Q86Y34 549 aa13.99□□□□□ -0.17
USB1-208ENST00000563207 CADM2Q8N3J6 435 aa13.99□□□□□ -0.17
USB1-208ENST00000563207 FAM156AQ8NDB6 213 aa13.99□□□□□ -0.17
USB1-208ENST00000563207 WFDC11Q8NEX6 87 aa13.99□□□□□ -0.17
USB1-208ENST00000563207 OR6T1Q8NGN1 323 aa13.99□□□□□ -0.17
USB1-208ENST00000563207 ZNF524Q96C55 264 aa13.99□□□□□ -0.17
USB1-208ENST00000563207 KLHL15Q96M94 604 aa13.99□□□□□ -0.17
USB1-208ENST00000563207 NSMCE2Q96MF7 247 aa13.99□□□□□ -0.17
USB1-208ENST00000563207 ZFP3Q96NJ6 502 aa13.99□□□□□ -0.17
USB1-208ENST00000563207 WFIKKN1Q96NZ8 548 aa13.99□□□□□ -0.17
USB1-208ENST00000563207 MCHR1Q99705 422 aa13.99□□□□□ -0.17
USB1-208ENST00000563207 THTPAQ9BU02 230 aa13.99□□□□□ -0.17
USB1-208ENST00000563207 MMADHCQ9H3L0 296 aaPredicted RBP13.99□□□□□ -0.17
USB1-208ENST00000563207 TIGARQ9NQ88 270 aa13.99□□□□□ -0.17
USB1-208ENST00000563207 CTPS2Q9NRF8 586 aa13.99□□□□□ -0.17
USB1-208ENST00000563207 SELENONQ9NZV5 590 aa13.99□□□□□ -0.17
USB1-208ENST00000563207 ACTR3BQ9P1U1 418 aa13.99□□□□□ -0.17
USB1-208ENST00000563207 OSGIN1Q9UJX0 560 aa13.99□□□□□ -0.17
USB1-208ENST00000563207 PACSIN3Q9UKS6 424 aa13.99□□□□□ -0.17
USB1-208ENST00000563207 SH3GLB1Q9Y371 365 aa13.99□□□□□ -0.17
USB1-208ENST00000563207 ABCA4P78363 2273 aa13.99□□□□□ -0.17
USB1-208ENST00000563207 NIPBLQ6KC79 2804 aaeCLIP13.99□□□□□ -0.17
USB1-208ENST00000563207 TMED7-TICAM2A0A0A6YYA0 188 aa13.98□□□□□ -0.17
USB1-208ENST00000563207 EFNA2O43921 213 aa13.98□□□□□ -0.17
USB1-208ENST00000563207 AQP8O94778 261 aa13.98□□□□□ -0.17
USB1-208ENST00000563207 STAMBPO95630 424 aa13.98□□□□□ -0.17
USB1-208ENST00000563207 ZNF682O95780 498 aa13.98□□□□□ -0.17
USB1-208ENST00000563207 CGAP01215 116 aa13.98□□□□□ -0.17
USB1-208ENST00000563207 RAF1P04049 648 aa13.98□□□□□ -0.17
USB1-208ENST00000563207 NCK1P16333 377 aa13.98□□□□□ -0.17
USB1-208ENST00000563207 CCKARP32238 428 aa13.98□□□□□ -0.17
USB1-208ENST00000563207 TRAP1Q12931 704 aaKnown RBP13.98□□□□□ -0.17
USB1-208ENST00000563207 OR1Q1Q15612 314 aa13.98□□□□□ -0.17
USB1-208ENST00000563207 CCDC121Q6ZUS5 278 aa13.98□□□□□ -0.17
USB1-208ENST00000563207 CARM1Q86X55 608 aa13.98□□□□□ -0.17
USB1-208ENST00000563207 KRTAP1-3Q8IUG1 177 aa13.98□□□□□ -0.17
USB1-208ENST00000563207 GEMIN6Q8WXD5 167 aaKnown RBP13.98□□□□□ -0.17
USB1-208ENST00000563207 C3orf49Q96BT1 292 aa13.98□□□□□ -0.17
USB1-208ENST00000563207 DDIT4LQ96D03 193 aa13.98□□□□□ -0.17
USB1-208ENST00000563207 ASB9Q96DX5 294 aa13.98□□□□□ -0.17
USB1-208ENST00000563207 SLC47A1Q96FL8 570 aa13.98□□□□□ -0.17
USB1-208ENST00000563207 TPD52L3Q96J77 140 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms