RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 TGFBR3Q03167 851 aa10.36□□□□□ -0.75
CARMIL3-204ENST00000561354 MAD2L1Q13257 205 aaPredicted RBP10.36□□□□□ -0.75
CARMIL3-204ENST00000561354 SWI5Q1ZZU3 235 aa10.36□□□□□ -0.75
CARMIL3-204ENST00000561354 TYW3Q6IPR3 259 aaKnown RBP10.36□□□□□ -0.75
CARMIL3-204ENST00000561354 FAM166AQ6J272 317 aa10.36□□□□□ -0.75
CARMIL3-204ENST00000561354 OLIG3Q7RTU3 272 aa10.36□□□□□ -0.75
CARMIL3-204ENST00000561354 CCDC103Q8IW40 242 aa10.36□□□□□ -0.75
CARMIL3-204ENST00000561354 CLECL1Q8IZS7 167 aa10.36□□□□□ -0.75
CARMIL3-204ENST00000561354 OR52E4Q8NGH9 312 aa10.36□□□□□ -0.75
CARMIL3-204ENST00000561354 AGR3Q8TD06 166 aa10.36□□□□□ -0.75
CARMIL3-204ENST00000561354 TCP10LQ8TDR4 215 aa10.36□□□□□ -0.75
CARMIL3-204ENST00000561354 SLC35G5Q96KT7 338 aa10.36□□□□□ -0.75
CARMIL3-204ENST00000561354 PAIP2Q9BPZ3 127 aaKnown RBP10.36□□□□□ -0.75
CARMIL3-204ENST00000561354 C19orf24Q9BVV8 132 aa10.36□□□□□ -0.75
CARMIL3-204ENST00000561354 C1QTNF6Q9BXI9 259 aa10.36□□□□□ -0.75
CARMIL3-204ENST00000561354 OR11A1Q9GZK7 315 aa10.36□□□□□ -0.75
CARMIL3-204ENST00000561354 OR51I1Q9H343 314 aa10.36□□□□□ -0.75
CARMIL3-204ENST00000561354 SLC17A5Q9NRA2 495 aa10.36□□□□□ -0.75
CARMIL3-204ENST00000561354 FGFR1OP2Q9NVK5 253 aa10.36□□□□□ -0.75
CARMIL3-204ENST00000561354 ASIC5Q9NY37 505 aa10.36□□□□□ -0.75
CARMIL3-204ENST00000561354 TMEM181Q9P2C4 612 aa10.36□□□□□ -0.75
CARMIL3-204ENST00000561354 UPB1Q9UBR1 384 aa10.36□□□□□ -0.75
CARMIL3-204ENST00000561354 SLC9A8Q9Y2E8 581 aa10.36□□□□□ -0.75
CARMIL3-204ENST00000561354 ARL2BPQ9Y2Y0 163 aa10.36□□□□□ -0.75
CARMIL3-204ENST00000561354 WDR45Q9Y484 360 aa10.36□□□□□ -0.75
CARMIL3-204ENST00000561354 HEATR1Q9H583 2144 aaKnown RBP10.36□□□□□ -0.75
CARMIL3-204ENST00000561354 BIRC5O15392 142 aa10.35□□□□□ -0.75
CARMIL3-204ENST00000561354 ZNF208O43345 1280 aa10.35□□□□□ -0.75
CARMIL3-204ENST00000561354 EIF1BO60739 113 aaKnown RBP10.35□□□□□ -0.75
CARMIL3-204ENST00000561354 BCAS1O75363 584 aaPredicted RBP10.35□□□□□ -0.75
CARMIL3-204ENST00000561354 SRD5A1P18405 259 aa10.35□□□□□ -0.75
CARMIL3-204ENST00000561354 IGFBP5P24593 272 aa10.35□□□□□ -0.75
CARMIL3-204ENST00000561354 RYKP34925 604 aa10.35□□□□□ -0.75
CARMIL3-204ENST00000561354 ETV4P43268 484 aa10.35□□□□□ -0.75
CARMIL3-204ENST00000561354 HTR3AP46098 478 aa10.35□□□□□ -0.75
CARMIL3-204ENST00000561354 PDLIM4P50479 330 aa10.35□□□□□ -0.75
CARMIL3-204ENST00000561354 MAP2K6P52564 334 aa10.35□□□□□ -0.75
CARMIL3-204ENST00000561354 OR2B6P58173 313 aa10.35□□□□□ -0.75
CARMIL3-204ENST00000561354 PRPS1P60891 318 aa10.35□□□□□ -0.75
CARMIL3-204ENST00000561354 SLC35A1P78382 337 aa10.35□□□□□ -0.75
CARMIL3-204ENST00000561354 KCNJ10P78508 379 aa10.35□□□□□ -0.75
CARMIL3-204ENST00000561354 SLC25A3Q00325 362 aa10.35□□□□□ -0.75
CARMIL3-204ENST00000561354 EMX2Q04743 252 aa10.35□□□□□ -0.75
CARMIL3-204ENST00000561354 SMU1Q2TAY7 513 aa10.35□□□□□ -0.75
CARMIL3-204ENST00000561354 MST1LQ2TV78 715 aa10.35□□□□□ -0.75
CARMIL3-204ENST00000561354 PGS1Q32NB8 556 aa10.35□□□□□ -0.75
CARMIL3-204ENST00000561354 ATAD3BQ5T9A4 648 aa10.35□□□□□ -0.75
CARMIL3-204ENST00000561354 OR4F3Q6IEY1 312 aa10.35□□□□□ -0.75
CARMIL3-204ENST00000561354 CASP12Q6UXS9 341 aa10.35□□□□□ -0.75
CARMIL3-204ENST00000561354 CLEC4FQ8N1N0 589 aa10.35□□□□□ -0.75
CARMIL3-204ENST00000561354 ARIH2OSQ8N7S6 290 aa10.35□□□□□ -0.75
CARMIL3-204ENST00000561354 OR8J2Q8NGG1 315 aa10.35□□□□□ -0.75
CARMIL3-204ENST00000561354 XAGE5Q8WWM1 108 aa10.35□□□□□ -0.75
CARMIL3-204ENST00000561354 PMM1Q92871 262 aa10.35□□□□□ -0.75
CARMIL3-204ENST00000561354 ROPN1LQ96C74 230 aa10.35□□□□□ -0.75
CARMIL3-204ENST00000561354 TUBGCP3Q96CW5 907 aa10.35□□□□□ -0.75
CARMIL3-204ENST00000561354 BOD1Q96IK1 185 aa10.35□□□□□ -0.75
CARMIL3-204ENST00000561354 ELAC2Q9BQ52 826 aaKnown RBP10.35□□□□□ -0.75
CARMIL3-204ENST00000561354 MECRQ9BV79 373 aa10.35□□□□□ -0.75
CARMIL3-204ENST00000561354 SLC7A10Q9NS82 523 aa10.35□□□□□ -0.75
CARMIL3-204ENST00000561354 NOP53Q9NZM5 478 aaKnown RBP10.35□□□□□ -0.75
CARMIL3-204ENST00000561354 KLHL14Q9P2G3 628 aa10.35□□□□□ -0.75
CARMIL3-204ENST00000561354 ZDHHC2Q9UIJ5 367 aa10.35□□□□□ -0.75
CARMIL3-204ENST00000561354 PRDM4Q9UKN5 801 aa10.35□□□□□ -0.75
CARMIL3-204ENST00000561354 KCNS2Q9ULS6 477 aa10.35□□□□□ -0.75
CARMIL3-204ENST00000561354 PCDHGB4Q9UN71 923 aa10.35□□□□□ -0.75
CARMIL3-204ENST00000561354 FLVCR1Q9Y5Y0 555 aa10.35□□□□□ -0.75
CARMIL3-204ENST00000561354 FKBP7Q9Y680 259 aa10.35□□□□□ -0.75
CARMIL3-204ENST00000561354 MALRD1Q5VYJ5 2156 aa10.34□□□□□ -0.75
CARMIL3-204ENST00000561354 ATP6V1G2-DDX39BF2Z307 99 aa10.34□□□□□ -0.75
CARMIL3-204ENST00000561354 EDF1O60869 148 aaKnown RBP10.34□□□□□ -0.75
CARMIL3-204ENST00000561354 SCN2BO60939 215 aa10.34□□□□□ -0.75
CARMIL3-204ENST00000561354 SKAP2O75563 359 aaPredicted RBP10.34□□□□□ -0.75
CARMIL3-204ENST00000561354 LY6HO94772 140 aa10.34□□□□□ -0.75
CARMIL3-204ENST00000561354 WNT11O96014 354 aa10.34□□□□□ -0.75
CARMIL3-204ENST00000561354 OR12D1P0DN82 309 aa10.34□□□□□ -0.75
CARMIL3-204ENST00000561354 TROVE2P10155 538 aaKnown RBP eCLIP10.34□□□□□ -0.75
CARMIL3-204ENST00000561354 PAX7P23759 505 aa10.34□□□□□ -0.75
CARMIL3-204ENST00000561354 MPGP29372 298 aa10.34□□□□□ -0.75
CARMIL3-204ENST00000561354 ARRB2P32121 409 aa10.34□□□□□ -0.75
CARMIL3-204ENST00000561354 NR4A2P43354 598 aa10.34□□□□□ -0.75
CARMIL3-204ENST00000561354 IDH2P48735 452 aaKnown RBP10.34□□□□□ -0.75
CARMIL3-204ENST00000561354 PLAURQ03405 335 aa10.34□□□□□ -0.75
CARMIL3-204ENST00000561354 SLC17A1Q14916 467 aa10.34□□□□□ -0.75
CARMIL3-204ENST00000561354 FAM120AOSQ5T036 256 aa10.34□□□□□ -0.75
CARMIL3-204ENST00000561354 TSPO2Q5TGU0 170 aa10.34□□□□□ -0.75
CARMIL3-204ENST00000561354 ATG16L1Q676U5 607 aa10.34□□□□□ -0.75
CARMIL3-204ENST00000561354 FRRS1Q6ZNA5 592 aa10.34□□□□□ -0.75
CARMIL3-204ENST00000561354 ZCCHC23Q6ZST2 131 aa10.34□□□□□ -0.75
CARMIL3-204ENST00000561354 TMEM45BQ96B21 275 aa10.34□□□□□ -0.75
CARMIL3-204ENST00000561354 ZG16BQ96DA0 208 aa10.34□□□□□ -0.75
CARMIL3-204ENST00000561354 MSI2Q96DH6 328 aaKnown RBP10.34□□□□□ -0.75
CARMIL3-204ENST00000561354 DNAJA3Q96EY1 480 aa10.34□□□□□ -0.75
CARMIL3-204ENST00000561354 NAA11Q9BSU3 229 aaPredicted RBP10.34□□□□□ -0.75
CARMIL3-204ENST00000561354 PRR14Q9BWN1 585 aa10.34□□□□□ -0.75
CARMIL3-204ENST00000561354 MYOZ1Q9NP98 299 aaPredicted RBP10.34□□□□□ -0.75
CARMIL3-204ENST00000561354 OBP2BQ9NPH6 170 aa10.34□□□□□ -0.75
CARMIL3-204ENST00000561354 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.34□□□□□ -0.75
CARMIL3-204ENST00000561354 ARFGEF3Q5TH69 2177 aa10.33□□□□□ -0.76
CARMIL3-204ENST00000561354 TMED7-TICAM2A0A0A6YYA0 188 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms