RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 TUBB1Q9H4B7 451 aa9.15□□□□□ -0.94
CDC42BPB-207ENST00000560492 DYNLRB1Q9NP97 96 aa9.15□□□□□ -0.94
CDC42BPB-207ENST00000560492 CA10Q9NS85 328 aa9.15□□□□□ -0.94
CDC42BPB-207ENST00000560492 OXSMQ9NWU1 459 aa9.15□□□□□ -0.94
CDC42BPB-207ENST00000560492 TMEM181Q9P2C4 612 aa9.15□□□□□ -0.94
CDC42BPB-207ENST00000560492 MID2Q9UJV3 735 aa9.15□□□□□ -0.94
CDC42BPB-207ENST00000560492 SLC35A3Q9Y2D2 325 aa9.15□□□□□ -0.94
CDC42BPB-207ENST00000560492 WDR45Q9Y484 360 aa9.15□□□□□ -0.94
CDC42BPB-207ENST00000560492 FLVCR1Q9Y5Y0 555 aa9.15□□□□□ -0.94
CDC42BPB-207ENST00000560492 ANK2Q01484 3957 aa9.15□□□□□ -0.95
CDC42BPB-207ENST00000560492 TMED7-TICAM2A0A0A6YYA0 188 aa9.14□□□□□ -0.95
CDC42BPB-207ENST00000560492 IGHV1-18A0A0C4DH31 117 aa9.14□□□□□ -0.95
CDC42BPB-207ENST00000560492 VSTM5A8MXK1 200 aa9.14□□□□□ -0.95
CDC42BPB-207ENST00000560492 ETV2O00321 342 aaPredicted RBP9.14□□□□□ -0.95
CDC42BPB-207ENST00000560492 DNPH1O43598 174 aa9.14□□□□□ -0.95
CDC42BPB-207ENST00000560492 FCMRO60667 390 aa9.14□□□□□ -0.95
CDC42BPB-207ENST00000560492 EIF1BO60739 113 aaKnown RBP9.14□□□□□ -0.95
CDC42BPB-207ENST00000560492 SCN2BO60939 215 aa9.14□□□□□ -0.95
CDC42BPB-207ENST00000560492 UGT2B17O75795 530 aa9.14□□□□□ -0.95
CDC42BPB-207ENST00000560492 IFNGR1P15260 489 aa9.14□□□□□ -0.95
CDC42BPB-207ENST00000560492 PCMT1P22061 227 aa9.14□□□□□ -0.95
CDC42BPB-207ENST00000560492 ECHS1P30084 290 aa9.14□□□□□ -0.95
CDC42BPB-207ENST00000560492 IL2RGP31785 369 aa9.14□□□□□ -0.95
CDC42BPB-207ENST00000560492 IDH2P48735 452 aaKnown RBP9.14□□□□□ -0.95
CDC42BPB-207ENST00000560492 IDH3GP51553 393 aaPredicted RBP9.14□□□□□ -0.95
CDC42BPB-207ENST00000560492 SLC16A1P53985 500 aa9.14□□□□□ -0.95
CDC42BPB-207ENST00000560492 TUBA1BP68363 451 aa9.14□□□□□ -0.95
CDC42BPB-207ENST00000560492 TUBA4AP68366 448 aa9.14□□□□□ -0.95
CDC42BPB-207ENST00000560492 SLC35A1P78382 337 aa9.14□□□□□ -0.95
CDC42BPB-207ENST00000560492 ZNF141Q15928 474 aa9.14□□□□□ -0.95
CDC42BPB-207ENST00000560492 MST1LQ2TV78 715 aa9.14□□□□□ -0.95
CDC42BPB-207ENST00000560492 GPAT3Q53EU6 434 aa9.14□□□□□ -0.95
CDC42BPB-207ENST00000560492 OTUD3Q5T2D3 398 aaPredicted RBP9.14□□□□□ -0.95
CDC42BPB-207ENST00000560492 KANK2Q63ZY3 851 aa9.14□□□□□ -0.95
CDC42BPB-207ENST00000560492 TUBA1AQ71U36 451 aa9.14□□□□□ -0.95
CDC42BPB-207ENST00000560492 C6orf120Q7Z4R8 191 aa9.14□□□□□ -0.95
CDC42BPB-207ENST00000560492 C10orf107Q8IVU9 208 aa9.14□□□□□ -0.95
CDC42BPB-207ENST00000560492 KRTCAP2Q8N6L1 136 aa9.14□□□□□ -0.95
CDC42BPB-207ENST00000560492 NATD1Q8N6N6 113 aa9.14□□□□□ -0.95
CDC42BPB-207ENST00000560492 XAGE5Q8WWM1 108 aa9.14□□□□□ -0.95
CDC42BPB-207ENST00000560492 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.14□□□□□ -0.95
CDC42BPB-207ENST00000560492 AURKBQ96GD4 344 aaPredicted RBP9.14□□□□□ -0.95
CDC42BPB-207ENST00000560492 DUSP26Q9BV47 211 aa9.14□□□□□ -0.95
CDC42BPB-207ENST00000560492 CCDC106Q9BWC9 280 aa9.14□□□□□ -0.95
CDC42BPB-207ENST00000560492 OR51I1Q9H343 314 aa9.14□□□□□ -0.95
CDC42BPB-207ENST00000560492 METTL17Q9H7H0 456 aaPredicted RBP9.14□□□□□ -0.95
CDC42BPB-207ENST00000560492 TMEM45AQ9NWC5 275 aa9.14□□□□□ -0.95
CDC42BPB-207ENST00000560492 KCNE5Q9UJ90 142 aa9.14□□□□□ -0.95
CDC42BPB-207ENST00000560492 PCDHGB4Q9UN71 923 aa9.14□□□□□ -0.95
CDC42BPB-207ENST00000560492 TMED7Q9Y3B3 224 aa9.14□□□□□ -0.95
CDC42BPB-207ENST00000560492 PCDHB14Q9Y5E9 798 aa9.14□□□□□ -0.95
CDC42BPB-207ENST00000560492 DNAJC15Q9Y5T4 150 aa9.14□□□□□ -0.95
CDC42BPB-207ENST00000560492 ZNF587BE7ETH6 402 aa9.13□□□□□ -0.95
CDC42BPB-207ENST00000560492 hCG_2039718K7EN88 272 aa9.13□□□□□ -0.95
CDC42BPB-207ENST00000560492 LYPLA1O75608 230 aaPredicted RBP9.13□□□□□ -0.95
CDC42BPB-207ENST00000560492 STAMBPO95630 424 aa9.13□□□□□ -0.95
CDC42BPB-207ENST00000560492 OR12D1P0DN82 309 aa9.13□□□□□ -0.95
CDC42BPB-207ENST00000560492 H2AFXP16104 143 aaPredicted RBP9.13□□□□□ -0.95
CDC42BPB-207ENST00000560492 CREB1P16220 341 aa9.13□□□□□ -0.95
CDC42BPB-207ENST00000560492 FKBP2P26885 142 aaKnown RBP9.13□□□□□ -0.95
CDC42BPB-207ENST00000560492 CLK1P49759 484 aaKnown RBP9.13□□□□□ -0.95
CDC42BPB-207ENST00000560492 HBA1P69905 142 aa9.13□□□□□ -0.95
CDC42BPB-207ENST00000560492 ARHGAP11BQ3KRB8 267 aa9.13□□□□□ -0.95
CDC42BPB-207ENST00000560492 TBRG1Q3YBR2 411 aa9.13□□□□□ -0.95
CDC42BPB-207ENST00000560492 IL23RQ5VWK5 629 aa9.13□□□□□ -0.95
CDC42BPB-207ENST00000560492 TNFAIP8L2Q6P589 184 aaPredicted RBP9.13□□□□□ -0.95
CDC42BPB-207ENST00000560492 EMBQ6PCB8 327 aa9.13□□□□□ -0.95
CDC42BPB-207ENST00000560492 SPATA21Q7Z572 469 aa9.13□□□□□ -0.95
CDC42BPB-207ENST00000560492 LSRQ86X29 649 aaPredicted RBP9.13□□□□□ -0.95
CDC42BPB-207ENST00000560492 CLECL1Q8IZS7 167 aa9.13□□□□□ -0.95
CDC42BPB-207ENST00000560492 C4orf33Q8N1A6 199 aa9.13□□□□□ -0.95
CDC42BPB-207ENST00000560492 EIF1ADQ8N9N8 165 aaKnown RBP9.13□□□□□ -0.95
CDC42BPB-207ENST00000560492 POMGNT2Q8NAT1 580 aa9.13□□□□□ -0.95
CDC42BPB-207ENST00000560492 OR4A15Q8NGL6 344 aa9.13□□□□□ -0.95
CDC42BPB-207ENST00000560492 PMM1Q92871 262 aa9.13□□□□□ -0.95
CDC42BPB-207ENST00000560492 RAB8BQ92930 207 aa9.13□□□□□ -0.95
CDC42BPB-207ENST00000560492 GCDHQ92947 438 aaPredicted RBP9.13□□□□□ -0.95
CDC42BPB-207ENST00000560492 KATNB1Q9BVA0 655 aa9.13□□□□□ -0.95
CDC42BPB-207ENST00000560492 GATA5Q9BWX5 397 aaPredicted RBP9.13□□□□□ -0.95
CDC42BPB-207ENST00000560492 NARFLQ9H6Q4 476 aa9.13□□□□□ -0.95
CDC42BPB-207ENST00000560492 LPAR2Q9HBW0 351 aa9.13□□□□□ -0.95
CDC42BPB-207ENST00000560492 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.13□□□□□ -0.95
CDC42BPB-207ENST00000560492 TRAPPC4Q9Y296 219 aa9.13□□□□□ -0.95
CDC42BPB-207ENST00000560492 SVEP1Q4LDE5 3571 aa9.12□□□□□ -0.95
CDC42BPB-207ENST00000560492 A0A096LPE4 126 aa9.12□□□□□ -0.95
CDC42BPB-207ENST00000560492 A0A1W2PPZ6 126 aa9.12□□□□□ -0.95
CDC42BPB-207ENST00000560492 PDLIM1O00151 329 aa9.12□□□□□ -0.95
CDC42BPB-207ENST00000560492 TRIM13O60858 407 aa9.12□□□□□ -0.95
CDC42BPB-207ENST00000560492 AKR7A3O95154 331 aa9.12□□□□□ -0.95
CDC42BPB-207ENST00000560492 CPSF4O95639 269 aaKnown RBP9.12□□□□□ -0.95
CDC42BPB-207ENST00000560492 LGI1O95970 557 aa9.12□□□□□ -0.95
CDC42BPB-207ENST00000560492 AGR2O95994 175 aa9.12□□□□□ -0.95
CDC42BPB-207ENST00000560492 CHRNGP07510 517 aa9.12□□□□□ -0.95
CDC42BPB-207ENST00000560492 UQCRBP14927 111 aa9.12□□□□□ -0.95
CDC42BPB-207ENST00000560492 PRPS1L1P21108 318 aa9.12□□□□□ -0.95
CDC42BPB-207ENST00000560492 CRHR1P34998 444 aa9.12□□□□□ -0.95
CDC42BPB-207ENST00000560492 CHI3L1P36222 383 aaPredicted RBP9.12□□□□□ -0.95
CDC42BPB-207ENST00000560492 PGM1P36871 562 aa9.12□□□□□ -0.95
CDC42BPB-207ENST00000560492 HTR3AP46098 478 aa9.12□□□□□ -0.95
CDC42BPB-207ENST00000560492 CAPZA2P47755 286 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms