RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 ZBED5Q49AG3 693 aa13.42□□□□□ -0.26
VPS18-202ENST00000558474 POMZP3Q6PJE2 187 aa13.42□□□□□ -0.26
VPS18-202ENST00000558474 MAMDC2Q7Z304 686 aaPredicted RBP13.42□□□□□ -0.26
VPS18-202ENST00000558474 SLC46A3Q7Z3Q1 461 aa13.42□□□□□ -0.26
VPS18-202ENST00000558474 OAFQ86UD1 273 aa13.42□□□□□ -0.26
VPS18-202ENST00000558474 C9orf43Q8TAL5 461 aaPredicted RBP13.42□□□□□ -0.26
VPS18-202ENST00000558474 TFAP2CQ92754 450 aa13.42□□□□□ -0.26
VPS18-202ENST00000558474 OSTF1Q92882 214 aa13.42□□□□□ -0.26
VPS18-202ENST00000558474 TAAR8Q969N4 342 aa13.42□□□□□ -0.26
VPS18-202ENST00000558474 PNPLA2Q96AD5 504 aa13.42□□□□□ -0.26
VPS18-202ENST00000558474 KTI12Q96EK9 354 aaPredicted RBP13.42□□□□□ -0.26
VPS18-202ENST00000558474 SFXN2Q96NB2 322 aa13.42□□□□□ -0.26
VPS18-202ENST00000558474 NPAS1Q99742 590 aa13.42□□□□□ -0.26
VPS18-202ENST00000558474 GPA33Q99795 319 aa13.42□□□□□ -0.26
VPS18-202ENST00000558474 ADI1Q9BV57 179 aa13.42□□□□□ -0.26
VPS18-202ENST00000558474 PTDSS2Q9BVG9 487 aa13.42□□□□□ -0.26
VPS18-202ENST00000558474 GRIP2Q9C0E4 1043 aa13.42□□□□□ -0.26
VPS18-202ENST00000558474 RPH3AQ9Y2J0 694 aaPredicted RBP13.42□□□□□ -0.26
VPS18-202ENST00000558474 CDC42EP2O14613 210 aa13.41□□□□□ -0.26
VPS18-202ENST00000558474 DNPH1O43598 174 aa13.41□□□□□ -0.26
VPS18-202ENST00000558474 PTP4A3O75365 173 aa13.41□□□□□ -0.26
VPS18-202ENST00000558474 PMS2P2O95744 297 aa13.41□□□□□ -0.26
VPS18-202ENST00000558474 CH25HO95992 272 aa13.41□□□□□ -0.26
VPS18-202ENST00000558474 IGHG3P01860 377 aa13.41□□□□□ -0.26
VPS18-202ENST00000558474 CRYABP02511 175 aaKnown RBP13.41□□□□□ -0.26
VPS18-202ENST00000558474 HIST1H2ABP04908 130 aa13.41□□□□□ -0.26
VPS18-202ENST00000558474 PEPDP12955 493 aa13.41□□□□□ -0.26
VPS18-202ENST00000558474 ACADSP16219 412 aa13.41□□□□□ -0.26
VPS18-202ENST00000558474 ZNF24P17028 368 aa13.41□□□□□ -0.26
VPS18-202ENST00000558474 BMP7P18075 431 aa13.41□□□□□ -0.26
VPS18-202ENST00000558474 CCNA2P20248 432 aa13.41□□□□□ -0.26
VPS18-202ENST00000558474 CAPGP40121 348 aa13.41□□□□□ -0.26
VPS18-202ENST00000558474 RPS5P46782 204 aaKnown RBP13.41□□□□□ -0.26
VPS18-202ENST00000558474 NUP107P57740 925 aa13.41□□□□□ -0.26
VPS18-202ENST00000558474 RPS4XP62701 263 aaKnown RBP13.41□□□□□ -0.26
VPS18-202ENST00000558474 ADARB1P78563 741 aaKnown RBP13.41□□□□□ -0.26
VPS18-202ENST00000558474 IL1RL1Q01638 556 aa13.41□□□□□ -0.26
VPS18-202ENST00000558474 WIPI1Q5MNZ9 446 aaPredicted RBP13.41□□□□□ -0.26
VPS18-202ENST00000558474 ANKRD34AQ69YU3 496 aa13.41□□□□□ -0.26
VPS18-202ENST00000558474 ZNF620Q6ZNG0 422 aa13.41□□□□□ -0.26
VPS18-202ENST00000558474 ESPNLQ6ZVH7 1005 aa13.41□□□□□ -0.26
VPS18-202ENST00000558474 HIST3H2AQ7L7L0 130 aa13.41□□□□□ -0.26
VPS18-202ENST00000558474 GALNT5Q7Z7M9 940 aa13.41□□□□□ -0.26
VPS18-202ENST00000558474 YRDCQ86U90 279 aaKnown RBP13.41□□□□□ -0.26
VPS18-202ENST00000558474 SCAIQ8N9R8 606 aa13.41□□□□□ -0.26
VPS18-202ENST00000558474 HIST1H2ACQ93077 130 aa13.41□□□□□ -0.26
VPS18-202ENST00000558474 HRASLS5Q96KN8 279 aa13.41□□□□□ -0.26
VPS18-202ENST00000558474 MBOAT4Q96T53 435 aa13.41□□□□□ -0.26
VPS18-202ENST00000558474 TAPBPLQ9BX59 468 aa13.41□□□□□ -0.26
VPS18-202ENST00000558474 ASPNQ9BXN1 380 aa13.41□□□□□ -0.26
VPS18-202ENST00000558474 FAM118AQ9NWS6 357 aa13.41□□□□□ -0.26
VPS18-202ENST00000558474 SIGLEC7Q9Y286 467 aa13.41□□□□□ -0.26
VPS18-202ENST00000558474 TP53TG5Q9Y2B4 290 aa13.41□□□□□ -0.26
VPS18-202ENST00000558474 HIF3AQ9Y2N7 669 aa13.41□□□□□ -0.26
VPS18-202ENST00000558474 CDH10Q9Y6N8 788 aa13.41□□□□□ -0.26
VPS18-202ENST00000558474 MPDZO75970 2070 aa13.4□□□□□ -0.26
VPS18-202ENST00000558474 LOC100130705A0A1B0GUX0 176 aa13.4□□□□□ -0.26
VPS18-202ENST00000558474 ZC3H12DA2A288 527 aaKnown RBP13.4□□□□□ -0.26
VPS18-202ENST00000558474 FAM166BA8MTA8 275 aa13.4□□□□□ -0.26
VPS18-202ENST00000558474 SHISA8B8ZZ34 492 aa13.4□□□□□ -0.26
VPS18-202ENST00000558474 FTCDNL1E5RQL4 147 aa13.4□□□□□ -0.26
VPS18-202ENST00000558474 TFECO14948 347 aaPredicted RBP13.4□□□□□ -0.26
VPS18-202ENST00000558474 DENRO43583 198 aaKnown RBP13.4□□□□□ -0.26
VPS18-202ENST00000558474 MITFO75030 526 aaPredicted RBP13.4□□□□□ -0.26
VPS18-202ENST00000558474 WISP1O95388 367 aa13.4□□□□□ -0.26
VPS18-202ENST00000558474 TP53P04637 393 aaPredicted RBP13.4□□□□□ -0.26
VPS18-202ENST00000558474 TFPIP10646 304 aa13.4□□□□□ -0.26
VPS18-202ENST00000558474 CSNK2A1P68400 391 aaPredicted RBP13.4□□□□□ -0.26
VPS18-202ENST00000558474 SLC35A1P78382 337 aa13.4□□□□□ -0.26
VPS18-202ENST00000558474 ZNF239Q16600 458 aaKnown RBP13.4□□□□□ -0.26
VPS18-202ENST00000558474 CMPK2Q5EBM0 449 aa13.4□□□□□ -0.26
VPS18-202ENST00000558474 PDSS1Q5T2R2 415 aa13.4□□□□□ -0.26
VPS18-202ENST00000558474 SMARCD3Q6STE5 483 aa13.4□□□□□ -0.26
VPS18-202ENST00000558474 TMPPEQ6ZT21 453 aa13.4□□□□□ -0.26
VPS18-202ENST00000558474 ADPRHL1Q8NDY3 354 aa13.4□□□□□ -0.26
VPS18-202ENST00000558474 OR5J2Q8NH18 312 aa13.4□□□□□ -0.26
VPS18-202ENST00000558474 NEIL3Q8TAT5 605 aa13.4□□□□□ -0.26
VPS18-202ENST00000558474 TEX47Q8TBZ9 253 aa13.4□□□□□ -0.26
VPS18-202ENST00000558474 MIB2Q96AX9 1013 aa13.4□□□□□ -0.26
VPS18-202ENST00000558474 KLHL15Q96M94 604 aa13.4□□□□□ -0.26
VPS18-202ENST00000558474 UBL7Q96S82 380 aaPredicted RBP13.4□□□□□ -0.26
VPS18-202ENST00000558474 PITX2Q99697 317 aa13.4□□□□□ -0.26
VPS18-202ENST00000558474 TEX12Q9BXU0 123 aa13.4□□□□□ -0.26
VPS18-202ENST00000558474 MFRPQ9BY79 579 aa13.4□□□□□ -0.26
VPS18-202ENST00000558474 RIBC2Q9H4K1 309 aa13.4□□□□□ -0.26
VPS18-202ENST00000558474 SLC25A19Q9HC21 320 aa13.4□□□□□ -0.26
VPS18-202ENST00000558474 FANCFQ9NPI8 374 aa13.4□□□□□ -0.26
VPS18-202ENST00000558474 PAQR5Q9NXK6 330 aaPredicted RBP13.4□□□□□ -0.26
VPS18-202ENST00000558474 ALKBH4Q9NXW9 302 aa13.4□□□□□ -0.26
VPS18-202ENST00000558474 MRPL39Q9NYK5 338 aaKnown RBP13.4□□□□□ -0.26
VPS18-202ENST00000558474 NDRG4Q9ULP0 352 aaKnown RBP13.4□□□□□ -0.26
VPS18-202ENST00000558474 BAIAP2Q9UQB8 552 aa13.4□□□□□ -0.26
VPS18-202ENST00000558474 HSPE1-MOB4S4R3N1 261 aa13.4□□□□□ -0.26
VPS18-202ENST00000558474 A0A1B0GVC2 190 aa13.39□□□□□ -0.27
VPS18-202ENST00000558474 LIPT2A6NK58 231 aa13.39□□□□□ -0.27
VPS18-202ENST00000558474 ZAR1LA6NP61 321 aa13.39□□□□□ -0.27
VPS18-202ENST00000558474 H3BML4 177 aa13.39□□□□□ -0.27
VPS18-202ENST00000558474 H3BN98 237 aa13.39□□□□□ -0.27
VPS18-202ENST00000558474 K7EM74 188 aa13.39□□□□□ -0.27
VPS18-202ENST00000558474 EIF1BO60739 113 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms