RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 PRSS27Q9BQR3 290 aa14.1□□□□□ -0.15
TMEM55B-207ENST00000557041 NXF5Q9H1B4 397 aaKnown RBP14.1□□□□□ -0.15
TMEM55B-207ENST00000557041 TMEM185BQ9H7F4 350 aa14.1□□□□□ -0.15
TMEM55B-207ENST00000557041 TCF7L1Q9HCS4 588 aa14.1□□□□□ -0.15
TMEM55B-207ENST00000557041 CMC2Q9NRP2 79 aa14.1□□□□□ -0.15
TMEM55B-207ENST00000557041 COPS7AQ9UBW8 275 aa14.1□□□□□ -0.15
TMEM55B-207ENST00000557041 SOX1O00570 391 aaPredicted RBP14.1□□□□□ -0.15
TMEM55B-207ENST00000557041 CHP2O43745 196 aa14.1□□□□□ -0.15
TMEM55B-207ENST00000557041 ORC5O43913 435 aa14.1□□□□□ -0.15
TMEM55B-207ENST00000557041 AK1P00568 194 aa14.1□□□□□ -0.15
TMEM55B-207ENST00000557041 COMMD2Q86X83 199 aa14.1□□□□□ -0.15
TMEM55B-207ENST00000557041 SLC35F2Q8IXU6 374 aa14.1□□□□□ -0.15
TMEM55B-207ENST00000557041 SCAIQ8N9R8 606 aa14.1□□□□□ -0.15
TMEM55B-207ENST00000557041 ZNF527Q8NB42 609 aa14.1□□□□□ -0.15
TMEM55B-207ENST00000557041 IL17RDQ8NFM7 739 aa14.1□□□□□ -0.15
TMEM55B-207ENST00000557041 RFT1Q96AA3 541 aa14.1□□□□□ -0.15
TMEM55B-207ENST00000557041 C5orf34Q96MH7 638 aa14.1□□□□□ -0.15
TMEM55B-207ENST00000557041 FAM210AQ96ND0 272 aa14.1□□□□□ -0.15
TMEM55B-207ENST00000557041 ULBP3Q9BZM4 244 aa14.1□□□□□ -0.15
TMEM55B-207ENST00000557041 PLXNA2O75051 1894 aa14.09□□□□□ -0.15
TMEM55B-207ENST00000557041 A0A1W2PPC4 97 aa14.09□□□□□ -0.15
TMEM55B-207ENST00000557041 CTNSO60931 367 aa14.09□□□□□ -0.15
TMEM55B-207ENST00000557041 KIR2DL3P43628 341 aa14.09□□□□□ -0.15
TMEM55B-207ENST00000557041 HTR3AP46098 478 aa14.09□□□□□ -0.15
TMEM55B-207ENST00000557041 HSD17B12Q53GQ0 312 aa14.09□□□□□ -0.15
TMEM55B-207ENST00000557041 ALG10Q5BKT4 473 aa14.09□□□□□ -0.15
TMEM55B-207ENST00000557041 CD300LDQ6UXZ3 194 aa14.09□□□□□ -0.15
TMEM55B-207ENST00000557041 BCORP1Q8N888 145 aa14.09□□□□□ -0.15
TMEM55B-207ENST00000557041 METTL21AQ8WXB1 218 aa14.09□□□□□ -0.15
TMEM55B-207ENST00000557041 ITFG2Q969R8 447 aa14.09□□□□□ -0.15
TMEM55B-207ENST00000557041 SDHCQ99643 169 aaPredicted RBP14.09□□□□□ -0.15
TMEM55B-207ENST00000557041 VDAC3Q9Y277 283 aa14.09□□□□□ -0.15
TMEM55B-207ENST00000557041 DHPSP49366 369 aaPredicted RBP14.09□□□□□ -0.15
TMEM55B-207ENST00000557041 GPR143P51810 404 aa14.09□□□□□ -0.15
TMEM55B-207ENST00000557041 PLCXD2Q0VAA5 305 aa14.09□□□□□ -0.15
TMEM55B-207ENST00000557041 KANSL1Q7Z3B3 1105 aa14.09□□□□□ -0.15
TMEM55B-207ENST00000557041 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.09□□□□□ -0.15
TMEM55B-207ENST00000557041 GPBAR1Q8TDU6 330 aa14.09□□□□□ -0.15
TMEM55B-207ENST00000557041 NSMAFQ92636 917 aa14.09□□□□□ -0.15
TMEM55B-207ENST00000557041 THAP7Q9BT49 309 aaPredicted RBP14.09□□□□□ -0.15
TMEM55B-207ENST00000557041 MED28Q9H204 178 aa14.09□□□□□ -0.15
TMEM55B-207ENST00000557041 GALNT9Q9HCQ5 603 aa14.09□□□□□ -0.15
TMEM55B-207ENST00000557041 SLC2A4RGQ9NR83 387 aa14.09□□□□□ -0.15
TMEM55B-207ENST00000557041 CENPMQ9NSP4 180 aa14.09□□□□□ -0.15
TMEM55B-207ENST00000557041 ING3Q9NXR8 418 aa14.09□□□□□ -0.15
TMEM55B-207ENST00000557041 LAMP5Q9UJQ1 280 aa14.09□□□□□ -0.15
TMEM55B-207ENST00000557041 POMT2Q9UKY4 750 aa14.09□□□□□ -0.15
TMEM55B-207ENST00000557041 PLCL2Q9UPR0 1127 aa14.09□□□□□ -0.15
TMEM55B-207ENST00000557041 HS3ST3A1Q9Y663 406 aa14.09□□□□□ -0.15
TMEM55B-207ENST00000557041 A0A1B0GTH9 108 aa14.09□□□□□ -0.15
TMEM55B-207ENST00000557041 IQCMA0A1B0GVH7 501 aa14.09□□□□□ -0.15
TMEM55B-207ENST00000557041 POU2F2P09086 479 aa14.09□□□□□ -0.15
TMEM55B-207ENST00000557041 PTHLHP12272 177 aa14.09□□□□□ -0.15
TMEM55B-207ENST00000557041 PRKCAP17252 672 aa14.09□□□□□ -0.15
TMEM55B-207ENST00000557041 CEP78Q5JTW2 689 aa14.09□□□□□ -0.15
TMEM55B-207ENST00000557041 HEPHL1Q6MZM0 1159 aa14.09□□□□□ -0.15
TMEM55B-207ENST00000557041 SFXN4Q6P4A7 337 aa14.09□□□□□ -0.15
TMEM55B-207ENST00000557041 LUZP2Q86TE4 346 aa14.09□□□□□ -0.15
TMEM55B-207ENST00000557041 GPALPP1Q8IXQ4 340 aa14.09□□□□□ -0.15
TMEM55B-207ENST00000557041 SLITRK2Q9H156 845 aa14.09□□□□□ -0.15
TMEM55B-207ENST00000557041 S1PR5Q9H228 398 aa14.09□□□□□ -0.15
TMEM55B-207ENST00000557041 STMN3Q9NZ72 180 aa14.09□□□□□ -0.15
TMEM55B-207ENST00000557041 SPATA2Q9UM82 520 aa14.09□□□□□ -0.15
TMEM55B-207ENST00000557041 HOXD12P35452 270 aa14.08□□□□□ -0.16
TMEM55B-207ENST00000557041 LTBRP36941 435 aa14.08□□□□□ -0.16
TMEM55B-207ENST00000557041 NTRK2Q16620 822 aa14.08□□□□□ -0.16
TMEM55B-207ENST00000557041 DPY19L4Q7Z388 723 aa14.08□□□□□ -0.16
TMEM55B-207ENST00000557041 MARCH3Q86UD3 253 aa14.08□□□□□ -0.16
TMEM55B-207ENST00000557041 RNF113BQ8IZP6 322 aaKnown RBP14.08□□□□□ -0.16
TMEM55B-207ENST00000557041 CEP76Q8TAP6 659 aa14.08□□□□□ -0.16
TMEM55B-207ENST00000557041 ZDHHC12Q96GR4 267 aa14.08□□□□□ -0.16
TMEM55B-207ENST00000557041 TXNDC15Q96J42 360 aa14.08□□□□□ -0.16
TMEM55B-207ENST00000557041 ANKRD19PQ9H560 264 aa14.08□□□□□ -0.16
TMEM55B-207ENST00000557041 POLR1DQ9Y2S0 133 aa14.08□□□□□ -0.16
TMEM55B-207ENST00000557041 SPARCP09486 303 aa14.08□□□□□ -0.16
TMEM55B-207ENST00000557041 UBL4AP11441 157 aa14.08□□□□□ -0.16
TMEM55B-207ENST00000557041 TACR3P29371 465 aa14.08□□□□□ -0.16
TMEM55B-207ENST00000557041 LNX2Q8N448 690 aa14.08□□□□□ -0.16
TMEM55B-207ENST00000557041 LSM14AQ8ND56 463 aaKnown RBP14.08□□□□□ -0.16
TMEM55B-207ENST00000557041 DNAAF1Q8NEP3 725 aa14.08□□□□□ -0.16
TMEM55B-207ENST00000557041 STACQ99469 402 aa14.08□□□□□ -0.16
TMEM55B-207ENST00000557041 ORAI3Q9BRQ5 295 aa14.08□□□□□ -0.16
TMEM55B-207ENST00000557041 PPIL3Q9H2H8 161 aaKnown RBP14.08□□□□□ -0.16
TMEM55B-207ENST00000557041 B3GAT2Q9NPZ5 323 aa14.08□□□□□ -0.16
TMEM55B-207ENST00000557041 CUTCQ9NTM9 273 aa14.08□□□□□ -0.16
TMEM55B-207ENST00000557041 PRODH2Q9UF12 536 aa14.08□□□□□ -0.16
TMEM55B-207ENST00000557041 MEIS3P1A6NDR6 274 aa14.07□□□□□ -0.16
TMEM55B-207ENST00000557041 H3BML4 177 aa14.07□□□□□ -0.16
TMEM55B-207ENST00000557041 NGFRP08138 427 aa14.07□□□□□ -0.16
TMEM55B-207ENST00000557041 HNRNPKP61978 463 aaKnown RBP eCLIP14.07□□□□□ -0.16
TMEM55B-207ENST00000557041 POGLUT1Q8NBL1 392 aa14.07□□□□□ -0.16
TMEM55B-207ENST00000557041 TOR1AIP2Q8NFQ8 470 aa14.07□□□□□ -0.16
TMEM55B-207ENST00000557041 OR52N1Q8NH53 320 aa14.07□□□□□ -0.16
TMEM55B-207ENST00000557041 ITPKCQ96DU7 683 aa14.07□□□□□ -0.16
TMEM55B-207ENST00000557041 TM4SF19Q96DZ7 209 aa14.07□□□□□ -0.16
TMEM55B-207ENST00000557041 PSD2Q9BQI7 771 aa14.07□□□□□ -0.16
TMEM55B-207ENST00000557041 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.07□□□□□ -0.16
TMEM55B-207ENST00000557041 TSPAN10Q9H1Z9 355 aaPredicted RBP14.07□□□□□ -0.16
TMEM55B-207ENST00000557041 SYT4Q9H2B2 425 aa14.07□□□□□ -0.16
TMEM55B-207ENST00000557041 RXFP3Q9NSD7 469 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms