RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 ZNF3P17036 446 aa13.39□□□□□ -0.27
VPS33B-205ENST00000556096 SPINK2P20155 84 aa13.39□□□□□ -0.27
VPS33B-205ENST00000556096 GADD45AP24522 165 aa13.39□□□□□ -0.27
VPS33B-205ENST00000556096 CXCR1P25024 350 aa13.39□□□□□ -0.27
VPS33B-205ENST00000556096 UGT2B10P36537 528 aa13.39□□□□□ -0.27
VPS33B-205ENST00000556096 SUMO3P55854 103 aaPredicted RBP13.39□□□□□ -0.27
VPS33B-205ENST00000556096 VBP1P61758 197 aa13.39□□□□□ -0.27
VPS33B-205ENST00000556096 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.39□□□□□ -0.27
VPS33B-205ENST00000556096 FOXC1Q12948 553 aa13.39□□□□□ -0.27
VPS33B-205ENST00000556096 MLLT11Q13015 90 aaPredicted RBP13.39□□□□□ -0.27
VPS33B-205ENST00000556096 TOMM34Q15785 309 aaPredicted RBP13.39□□□□□ -0.27
VPS33B-205ENST00000556096 EXT1Q16394 746 aa13.39□□□□□ -0.27
VPS33B-205ENST00000556096 TSTQ16762 297 aaKnown RBP13.39□□□□□ -0.27
VPS33B-205ENST00000556096 TIMM50Q3ZCQ8 353 aa13.39□□□□□ -0.27
VPS33B-205ENST00000556096 RAB11FIP2Q7L804 512 aa13.39□□□□□ -0.27
VPS33B-205ENST00000556096 SLC37A3Q8NCC5 494 aa13.39□□□□□ -0.27
VPS33B-205ENST00000556096 PSD4Q8NDX1 1056 aa13.39□□□□□ -0.27
VPS33B-205ENST00000556096 RPL3LQ92901 407 aaKnown RBP13.39□□□□□ -0.27
VPS33B-205ENST00000556096 LIN37Q96GY3 246 aaPredicted RBP13.39□□□□□ -0.27
VPS33B-205ENST00000556096 IMMP1LQ96LU5 166 aa13.39□□□□□ -0.27
VPS33B-205ENST00000556096 ERMAPQ96PL5 475 aaPredicted RBP13.39□□□□□ -0.27
VPS33B-205ENST00000556096 TAAR9Q96RI9 348 aa13.39□□□□□ -0.27
VPS33B-205ENST00000556096 DDA1Q9BW61 102 aa13.39□□□□□ -0.27
VPS33B-205ENST00000556096 MMP25Q9NPA2 562 aa13.39□□□□□ -0.27
VPS33B-205ENST00000556096 NANSQ9NR45 359 aa13.39□□□□□ -0.27
VPS33B-205ENST00000556096 HIF3AQ9Y2N7 669 aa13.39□□□□□ -0.27
VPS33B-205ENST00000556096 TEX51A0A1B0GUA7 166 aa13.38□□□□□ -0.27
VPS33B-205ENST00000556096 SLC22A31A6NKX4 558 aa13.38□□□□□ -0.27
VPS33B-205ENST00000556096 LRRN3E7EW58 273 aa13.38□□□□□ -0.27
VPS33B-205ENST00000556096 J3QRE1 110 aa13.38□□□□□ -0.27
VPS33B-205ENST00000556096 STK17BO94768 372 aa13.38□□□□□ -0.27
VPS33B-205ENST00000556096 NUDT14O95848 222 aa13.38□□□□□ -0.27
VPS33B-205ENST00000556096 FBXO45P0C2W1 286 aa13.38□□□□□ -0.27
VPS33B-205ENST00000556096 ASAH2BP0C7U1 165 aa13.38□□□□□ -0.27
VPS33B-205ENST00000556096 PAICSP22234 425 aaKnown RBP13.38□□□□□ -0.27
VPS33B-205ENST00000556096 NOS3P29474 1203 aa13.38□□□□□ -0.27
VPS33B-205ENST00000556096 CLK1P49759 484 aaKnown RBP13.38□□□□□ -0.27
VPS33B-205ENST00000556096 POLR2HP52434 150 aaKnown RBP13.38□□□□□ -0.27
VPS33B-205ENST00000556096 WNT4P56705 351 aa13.38□□□□□ -0.27
VPS33B-205ENST00000556096 LSM3P62310 102 aaKnown RBP13.38□□□□□ -0.27
VPS33B-205ENST00000556096 DOC2BQ14184 412 aa13.38□□□□□ -0.27
VPS33B-205ENST00000556096 QPRTQ15274 297 aa13.38□□□□□ -0.27
VPS33B-205ENST00000556096 BTBD16Q32M84 506 aa13.38□□□□□ -0.27
VPS33B-205ENST00000556096 PAQR6Q6TCH4 344 aa13.38□□□□□ -0.27
VPS33B-205ENST00000556096 ATCAYQ86WG3 371 aa13.38□□□□□ -0.27
VPS33B-205ENST00000556096 TBC1D15Q8TC07 691 aa13.38□□□□□ -0.27
VPS33B-205ENST00000556096 M1APQ8TC57 530 aa13.38□□□□□ -0.27
VPS33B-205ENST00000556096 NRIP3Q9NQ35 241 aa13.38□□□□□ -0.27
VPS33B-205ENST00000556096 TAS2R10Q9NYW0 307 aa13.38□□□□□ -0.27
VPS33B-205ENST00000556096 PADI1Q9ULC6 663 aa13.38□□□□□ -0.27
VPS33B-205ENST00000556096 IER3IP1Q9Y5U9 82 aa13.38□□□□□ -0.27
VPS33B-205ENST00000556096 HS3ST3B1Q9Y662 390 aa13.38□□□□□ -0.27
VPS33B-205ENST00000556096 WDFY3Q8IZQ1 3526 aa13.37□□□□□ -0.27
VPS33B-205ENST00000556096 PMS2P1A4D2B8 440 aa13.37□□□□□ -0.27
VPS33B-205ENST00000556096 ANKUB1A6NFN9 424 aa13.37□□□□□ -0.27
VPS33B-205ENST00000556096 C17orf51A8MQB3 221 aa13.37□□□□□ -0.27
VPS33B-205ENST00000556096 MCIDASD6RGH6 385 aa13.37□□□□□ -0.27
VPS33B-205ENST00000556096 DKK1O94907 266 aa13.37□□□□□ -0.27
VPS33B-205ENST00000556096 TSPAN19P0C672 248 aa13.37□□□□□ -0.27
VPS33B-205ENST00000556096 LIMS3P0CW19 117 aa13.37□□□□□ -0.27
VPS33B-205ENST00000556096 LIMS4P0CW20 117 aa13.37□□□□□ -0.27
VPS33B-205ENST00000556096 COX6A1P12074 109 aa13.37□□□□□ -0.27
VPS33B-205ENST00000556096 APEHP13798 732 aaKnown RBP13.37□□□□□ -0.27
VPS33B-205ENST00000556096 SLC2A5P22732 501 aa13.37□□□□□ -0.27
VPS33B-205ENST00000556096 FOLR3P41439 243 aa13.37□□□□□ -0.27
VPS33B-205ENST00000556096 HTR3AP46098 478 aa13.37□□□□□ -0.27
VPS33B-205ENST00000556096 DLX5P56178 289 aa13.37□□□□□ -0.27
VPS33B-205ENST00000556096 NCS1P62166 190 aa13.37□□□□□ -0.27
VPS33B-205ENST00000556096 TUBA1BP68363 451 aa13.37□□□□□ -0.27
VPS33B-205ENST00000556096 LTBQ06643 244 aa13.37□□□□□ -0.27
VPS33B-205ENST00000556096 CRMP1Q14194 572 aa13.37□□□□□ -0.27
VPS33B-205ENST00000556096 SSX1Q16384 188 aa13.37□□□□□ -0.27
VPS33B-205ENST00000556096 COL28A1Q2UY09 1125 aa13.37□□□□□ -0.27
VPS33B-205ENST00000556096 FAM69BQ5VUD6 431 aa13.37□□□□□ -0.27
VPS33B-205ENST00000556096 C6orf15Q6UXA7 325 aaPredicted RBP13.37□□□□□ -0.27
VPS33B-205ENST00000556096 TUBA1AQ71U36 451 aa13.37□□□□□ -0.27
VPS33B-205ENST00000556096 GRINAQ7Z429 371 aa13.37□□□□□ -0.27
VPS33B-205ENST00000556096 NDNFQ8TB73 568 aa13.37□□□□□ -0.27
VPS33B-205ENST00000556096 DYNC2LI1Q8TCX1 351 aa13.37□□□□□ -0.27
VPS33B-205ENST00000556096 TMEM234Q8WY98 164 aa13.37□□□□□ -0.27
VPS33B-205ENST00000556096 OTULINQ96BN8 352 aa13.37□□□□□ -0.27
VPS33B-205ENST00000556096 TEAD3Q99594 435 aa13.37□□□□□ -0.27
VPS33B-205ENST00000556096 HCAR1Q9BXC0 346 aa13.37□□□□□ -0.27
VPS33B-205ENST00000556096 MED20Q9H944 212 aa13.37□□□□□ -0.27
VPS33B-205ENST00000556096 FKRPQ9H9S5 495 aa13.37□□□□□ -0.27
VPS33B-205ENST00000556096 RYDENQ9NUL5 291 aaKnown RBP13.37□□□□□ -0.27
VPS33B-205ENST00000556096 HAO2Q9NYQ3 351 aa13.37□□□□□ -0.27
VPS33B-205ENST00000556096 TNFRSF10DQ9UBN6 386 aa13.37□□□□□ -0.27
VPS33B-205ENST00000556096 ZNF229Q9UJW7 825 aa13.37□□□□□ -0.27
VPS33B-205ENST00000556096 SLC6A5Q9Y345 797 aa13.37□□□□□ -0.27
VPS33B-205ENST00000556096 EXPH5Q8NEV8 1989 aa13.37□□□□□ -0.27
VPS33B-205ENST00000556096 TRAV36DV7A0A075B6V5 113 aa13.36□□□□□ -0.27
VPS33B-205ENST00000556096 CCDC182A6NF36 153 aa13.36□□□□□ -0.27
VPS33B-205ENST00000556096 PLD2O14939 933 aa13.36□□□□□ -0.27
VPS33B-205ENST00000556096 OR2J2O76002 312 aa13.36□□□□□ -0.27
VPS33B-205ENST00000556096 CLPXO76031 633 aa13.36□□□□□ -0.27
VPS33B-205ENST00000556096 APOL3O95236 402 aa13.36□□□□□ -0.27
VPS33B-205ENST00000556096 DLGAP3O95886 979 aa13.36□□□□□ -0.27
VPS33B-205ENST00000556096 RAB40ALP0C0E4 278 aa13.36□□□□□ -0.27
VPS33B-205ENST00000556096 CDK4P11802 303 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms