RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 HLA-DPA1P20036 260 aa1.6□□□□□ -2.15
SNX6-204ENST00000555541 TPSB2P20231 275 aa1.6□□□□□ -2.15
SNX6-204ENST00000555541 SHMT2P34897 504 aa1.6□□□□□ -2.15
SNX6-204ENST00000555541 PTGDSP41222 190 aa1.6□□□□□ -2.15
SNX6-204ENST00000555541 PTGFRP43088 359 aa1.6□□□□□ -2.15
SNX6-204ENST00000555541 VDAC2P45880 294 aaPredicted RBP1.6□□□□□ -2.15
SNX6-204ENST00000555541 ASMTP46597 345 aa1.6□□□□□ -2.15
SNX6-204ENST00000555541 NAPAP54920 295 aa1.6□□□□□ -2.15
SNX6-204ENST00000555541 RIPK1Q13546 671 aa1.6□□□□□ -2.15
SNX6-204ENST00000555541 GAMTQ14353 236 aa1.6□□□□□ -2.15
SNX6-204ENST00000555541 TPSAB1Q15661 275 aa1.6□□□□□ -2.15
SNX6-204ENST00000555541 LRRC10Q5BKY1 277 aa1.6□□□□□ -2.15
SNX6-204ENST00000555541 C12orf60Q5U649 245 aa1.6□□□□□ -2.15
SNX6-204ENST00000555541 NANOGP8Q6NSW7 305 aa1.6□□□□□ -2.15
SNX6-204ENST00000555541 CENPUQ71F23 418 aa1.6□□□□□ -2.15
SNX6-204ENST00000555541 FTMTQ8N4E7 242 aa1.6□□□□□ -2.15
SNX6-204ENST00000555541 FAM86B1Q8N7N1 296 aa1.6□□□□□ -2.15
SNX6-204ENST00000555541 OR10G9Q8NGN4 311 aa1.6□□□□□ -2.15
SNX6-204ENST00000555541 VPS35Q96QK1 796 aa1.6□□□□□ -2.15
SNX6-204ENST00000555541 ULBP2Q9BZM5 246 aa1.6□□□□□ -2.15
SNX6-204ENST00000555541 RHBGQ9H310 441 aa1.6□□□□□ -2.15
SNX6-204ENST00000555541 COL27A1Q8IZC6 1860 aaPredicted RBP1.6□□□□□ -2.15
SNX6-204ENST00000555541 FRMPD4Q14CM0 1322 aa1.6□□□□□ -2.15
SNX6-204ENST00000555541 CARMIL1Q5VZK9 1371 aa1.59□□□□□ -2.15
SNX6-204ENST00000555541 TRAV40A0A0B4J280 105 aa1.59□□□□□ -2.15
SNX6-204ENST00000555541 SDHDO14521 159 aa1.59□□□□□ -2.15
SNX6-204ENST00000555541 MSH4O15457 936 aa1.59□□□□□ -2.15
SNX6-204ENST00000555541 RCBTB2O95199 551 aa1.59□□□□□ -2.15
SNX6-204ENST00000555541 MT-ATP6P00846 226 aa1.59□□□□□ -2.15
SNX6-204ENST00000555541 CA1P00915 261 aaPredicted RBP1.59□□□□□ -2.15
SNX6-204ENST00000555541 TBXA2RP21731 343 aa1.59□□□□□ -2.15
SNX6-204ENST00000555541 FGF9P31371 208 aaPredicted RBP1.59□□□□□ -2.15
SNX6-204ENST00000555541 FMO3P31513 532 aa1.59□□□□□ -2.15
SNX6-204ENST00000555541 SLC26A3P40879 764 aa1.59□□□□□ -2.15
SNX6-204ENST00000555541 GRB7Q14451 532 aa1.59□□□□□ -2.15
SNX6-204ENST00000555541 TRIP10Q15642 601 aa1.59□□□□□ -2.15
SNX6-204ENST00000555541 ATP6AP1Q15904 470 aa1.59□□□□□ -2.15
SNX6-204ENST00000555541 ZNF311Q5JNZ3 666 aa1.59□□□□□ -2.15
SNX6-204ENST00000555541 TIGD3Q6B0B8 471 aa1.59□□□□□ -2.15
SNX6-204ENST00000555541 C19orf35Q6ZS72 473 aa1.59□□□□□ -2.15
SNX6-204ENST00000555541 ELMOD2Q8IZ81 293 aa1.59□□□□□ -2.15
SNX6-204ENST00000555541 OR5L2Q8NGL0 311 aa1.59□□□□□ -2.15
SNX6-204ENST00000555541 MCOLN3Q8TDD5 553 aa1.59□□□□□ -2.15
SNX6-204ENST00000555541 MRPS31Q92665 395 aaKnown RBP1.59□□□□□ -2.15
SNX6-204ENST00000555541 SMARCD2Q92925 531 aa1.59□□□□□ -2.15
SNX6-204ENST00000555541 SLC35A5Q9BS91 424 aa1.59□□□□□ -2.15
SNX6-204ENST00000555541 NDFIP1Q9BT67 221 aa1.59□□□□□ -2.15
SNX6-204ENST00000555541 DEFB127Q9H1M4 99 aa1.59□□□□□ -2.15
SNX6-204ENST00000555541 SUDS3Q9H7L9 328 aaPredicted RBP1.59□□□□□ -2.15
SNX6-204ENST00000555541 FOLH1BQ9HBA9 442 aa1.59□□□□□ -2.15
SNX6-204ENST00000555541 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP1.59□□□□□ -2.15
SNX6-204ENST00000555541 AIPL1Q9NZN9 384 aa1.59□□□□□ -2.15
SNX6-204ENST00000555541 SPASTQ9UBP0 616 aa1.59□□□□□ -2.15
SNX6-204ENST00000555541 GGA2Q9UJY4 613 aa1.59□□□□□ -2.15
SNX6-204ENST00000555541 B9D1Q9UPM9 204 aa1.59□□□□□ -2.15
SNX6-204ENST00000555541 TRAF3IP3Q9Y228 551 aa1.59□□□□□ -2.15
SNX6-204ENST00000555541 ALG6Q9Y672 507 aa1.59□□□□□ -2.15
SNX6-204ENST00000555541 CARMIL3Q8ND23 1372 aa1.59□□□□□ -2.16
SNX6-204ENST00000555541 A0A0U1RQV5 110 aa1.58□□□□□ -2.16
SNX6-204ENST00000555541 ZNF233A6NK53 670 aa1.58□□□□□ -2.16
SNX6-204ENST00000555541 DCTN6O00399 190 aa1.58□□□□□ -2.16
SNX6-204ENST00000555541 CD5LO43866 347 aa1.58□□□□□ -2.16
SNX6-204ENST00000555541 PPIAL4GP0DN37 164 aa1.58□□□□□ -2.16
SNX6-204ENST00000555541 POU2F1P14859 743 aa1.58□□□□□ -2.16
SNX6-204ENST00000555541 PGCP20142 388 aa1.58□□□□□ -2.16
SNX6-204ENST00000555541 NPY1RP25929 384 aa1.58□□□□□ -2.16
SNX6-204ENST00000555541 ANXA13P27216 316 aa1.58□□□□□ -2.16
SNX6-204ENST00000555541 YWHABP31946 246 aaKnown RBP1.58□□□□□ -2.16
SNX6-204ENST00000555541 KIF5BP33176 963 aa1.58□□□□□ -2.16
SNX6-204ENST00000555541 GLP1RP43220 463 aa1.58□□□□□ -2.16
SNX6-204ENST00000555541 HSPA2P54652 639 aa1.58□□□□□ -2.16
SNX6-204ENST00000555541 YBEYP58557 167 aaPredicted RBP1.58□□□□□ -2.16
SNX6-204ENST00000555541 EWSR1Q01844 656 aaKnown RBP eCLIP1.58□□□□□ -2.16
SNX6-204ENST00000555541 PPP2R5CQ13362 524 aa1.58□□□□□ -2.16
SNX6-204ENST00000555541 PRSS8Q16651 343 aa1.58□□□□□ -2.16
SNX6-204ENST00000555541 RFX4Q33E94 735 aa1.58□□□□□ -2.16
SNX6-204ENST00000555541 NIPAL3Q6P499 406 aa1.58□□□□□ -2.16
SNX6-204ENST00000555541 ZNF880Q6PDB4 577 aa1.58□□□□□ -2.16
SNX6-204ENST00000555541 ZNF620Q6ZNG0 422 aa1.58□□□□□ -2.16
SNX6-204ENST00000555541 NEGR1Q7Z3B1 354 aa1.58□□□□□ -2.16
SNX6-204ENST00000555541 ZNF571Q7Z3V5 609 aaPredicted RBP1.58□□□□□ -2.16
SNX6-204ENST00000555541 PAQR7Q86WK9 346 aa1.58□□□□□ -2.16
SNX6-204ENST00000555541 KDM8Q8N371 416 aa1.58□□□□□ -2.16
SNX6-204ENST00000555541 ZFP90Q8TF47 636 aa1.58□□□□□ -2.16
SNX6-204ENST00000555541 MYLPFQ96A32 169 aa1.58□□□□□ -2.16
SNX6-204ENST00000555541 C14orf79Q96F83 325 aa1.58□□□□□ -2.16
SNX6-204ENST00000555541 NAT9Q9BTE0 207 aa1.58□□□□□ -2.16
SNX6-204ENST00000555541 GSDMCQ9BYG8 508 aa1.58□□□□□ -2.16
SNX6-204ENST00000555541 THAP9Q9H5L6 903 aa1.58□□□□□ -2.16
SNX6-204ENST00000555541 ATXN10Q9UBB4 475 aa1.58□□□□□ -2.16
SNX6-204ENST00000555541 CLCF1Q9UBD9 225 aa1.58□□□□□ -2.16
SNX6-204ENST00000555541 HEBP2Q9Y5Z4 205 aa1.58□□□□□ -2.16
SNX6-204ENST00000555541 SPAG9O60271 1321 aaKnown RBP1.58□□□□□ -2.16
SNX6-204ENST00000555541 ENTPD5O75356 428 aa1.57□□□□□ -2.16
SNX6-204ENST00000555541 FUT1P19526 365 aa1.57□□□□□ -2.16
SNX6-204ENST00000555541 GDI1P31150 447 aa1.57□□□□□ -2.16
SNX6-204ENST00000555541 UBE2AP49459 152 aa1.57□□□□□ -2.16
SNX6-204ENST00000555541 DAP3P51398 398 aaKnown RBP1.57□□□□□ -2.16
SNX6-204ENST00000555541 HSD17B7P56937 341 aa1.57□□□□□ -2.16
SNX6-204ENST00000555541 CACNG7P62955 275 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms