RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 OPN1LWP04000 364 aa3.76□□□□□ -1.81
SCFD1-211ENST00000554437 GSTM3P21266 225 aa3.76□□□□□ -1.81
SCFD1-211ENST00000554437 TBXA2RP21731 343 aa3.76□□□□□ -1.81
SCFD1-211ENST00000554437 SAA4P35542 130 aa3.76□□□□□ -1.81
SCFD1-211ENST00000554437 HTR2BP41595 481 aa3.76□□□□□ -1.81
SCFD1-211ENST00000554437 ATP1B3P54709 279 aa3.76□□□□□ -1.81
SCFD1-211ENST00000554437 EWSR1Q01844 656 aaKnown RBP eCLIP3.76□□□□□ -1.81
SCFD1-211ENST00000554437 OGDHQ02218 1023 aa3.76□□□□□ -1.81
SCFD1-211ENST00000554437 CCDC173Q0VFZ6 552 aa3.76□□□□□ -1.81
SCFD1-211ENST00000554437 ZP4Q12836 540 aa3.76□□□□□ -1.81
SCFD1-211ENST00000554437 SLAQ13239 276 aa3.76□□□□□ -1.81
SCFD1-211ENST00000554437 SLC10A1Q14973 349 aa3.76□□□□□ -1.81
SCFD1-211ENST00000554437 ANGPT1Q15389 498 aa3.76□□□□□ -1.81
SCFD1-211ENST00000554437 AANATQ16613 207 aa3.76□□□□□ -1.81
SCFD1-211ENST00000554437 MICAQ29983 383 aa3.76□□□□□ -1.81
SCFD1-211ENST00000554437 CELF3Q5SZQ8 465 aaKnown RBP3.76□□□□□ -1.81
SCFD1-211ENST00000554437 SEL1L2Q5TEA6 688 aa3.76□□□□□ -1.81
SCFD1-211ENST00000554437 AP1ARQ63HQ0 302 aa3.76□□□□□ -1.81
SCFD1-211ENST00000554437 SLC25A25Q6KCM7 469 aa3.76□□□□□ -1.81
SCFD1-211ENST00000554437 TMEM184AQ6ZMB5 413 aa3.76□□□□□ -1.81
SCFD1-211ENST00000554437 STOX1Q6ZVD7 989 aa3.76□□□□□ -1.81
SCFD1-211ENST00000554437 DHDDSQ86SQ9 333 aa3.76□□□□□ -1.81
SCFD1-211ENST00000554437 SERPINA9Q86WD7 417 aa3.76□□□□□ -1.81
SCFD1-211ENST00000554437 VRK2Q86Y07 508 aa3.76□□□□□ -1.81
SCFD1-211ENST00000554437 FAM58AQ8N1B3 248 aa3.76□□□□□ -1.81
SCFD1-211ENST00000554437 GABRG1Q8N1C3 465 aa3.76□□□□□ -1.81
SCFD1-211ENST00000554437 OR2L3Q8NG85 312 aa3.76□□□□□ -1.81
SCFD1-211ENST00000554437 LRRC20Q8TCA0 184 aa3.76□□□□□ -1.81
SCFD1-211ENST00000554437 VN1R17PQ8TDU5 208 aa3.76□□□□□ -1.81
SCFD1-211ENST00000554437 PDCD6IPQ8WUM4 868 aaKnown RBP3.76□□□□□ -1.81
SCFD1-211ENST00000554437 C17orf50Q8WW18 174 aa3.76□□□□□ -1.81
SCFD1-211ENST00000554437 SLC38A2Q96QD8 506 aa3.76□□□□□ -1.81
SCFD1-211ENST00000554437 FAM173AQ9BQD7 235 aa3.76□□□□□ -1.81
SCFD1-211ENST00000554437 TRIM62Q9BVG3 475 aa3.76□□□□□ -1.81
SCFD1-211ENST00000554437 ELOVL6Q9H5J4 265 aa3.76□□□□□ -1.81
SCFD1-211ENST00000554437 SMYD3Q9H7B4 428 aa3.76□□□□□ -1.81
SCFD1-211ENST00000554437 IL26Q9NPH9 171 aa3.76□□□□□ -1.81
SCFD1-211ENST00000554437 ESM1Q9NQ30 184 aa3.76□□□□□ -1.81
SCFD1-211ENST00000554437 STARD5Q9NSY2 213 aa3.76□□□□□ -1.81
SCFD1-211ENST00000554437 IMPAD1Q9NX62 359 aa3.76□□□□□ -1.81
SCFD1-211ENST00000554437 KLRF1Q9NZS2 232 aa3.76□□□□□ -1.81
SCFD1-211ENST00000554437 B4GALT7Q9UBV7 327 aa3.76□□□□□ -1.81
SCFD1-211ENST00000554437 PRODH2Q9UF12 536 aa3.76□□□□□ -1.81
SCFD1-211ENST00000554437 MEMO1Q9Y316 297 aa3.76□□□□□ -1.81
SCFD1-211ENST00000554437 SH3TC1Q8TE82 1336 aa3.75□□□□□ -1.81
SCFD1-211ENST00000554437 SYNJ2O15056 1496 aa3.75□□□□□ -1.81
SCFD1-211ENST00000554437 NPIPA5A0A0B4J1W7 369 aa3.75□□□□□ -1.81
SCFD1-211ENST00000554437 TRBV11-1A0A0K0K1C0 115 aa3.75□□□□□ -1.81
SCFD1-211ENST00000554437 FBLL1A6NHQ2 334 aaKnown RBP3.75□□□□□ -1.81
SCFD1-211ENST00000554437 EFCAB7A8K855 629 aa3.75□□□□□ -1.81
SCFD1-211ENST00000554437 A8MU10 97 aa3.75□□□□□ -1.81
SCFD1-211ENST00000554437 KLLNB2CW77 178 aa3.75□□□□□ -1.81
SCFD1-211ENST00000554437 NPIPA7E9PJI5 369 aa3.75□□□□□ -1.81
SCFD1-211ENST00000554437 NPIPA5E9PKD4 350 aa3.75□□□□□ -1.81
SCFD1-211ENST00000554437 TEX46H3BTG2 121 aa3.75□□□□□ -1.81
SCFD1-211ENST00000554437 PDLIM1O00151 329 aa3.75□□□□□ -1.81
SCFD1-211ENST00000554437 OR7A17O14581 309 aa3.75□□□□□ -1.81
SCFD1-211ENST00000554437 IMPA2O14732 288 aa3.75□□□□□ -1.81
SCFD1-211ENST00000554437 BCKDKO14874 412 aa3.75□□□□□ -1.81
SCFD1-211ENST00000554437 CABYRO75952 493 aa3.75□□□□□ -1.81
SCFD1-211ENST00000554437 CLDN9O95484 217 aa3.75□□□□□ -1.81
SCFD1-211ENST00000554437 IGHV3-9P01782 118 aa3.75□□□□□ -1.81
SCFD1-211ENST00000554437 DNAH10OSP0CZ25 163 aa3.75□□□□□ -1.81
SCFD1-211ENST00000554437 NPIPA8P0DM63 369 aa3.75□□□□□ -1.81
SCFD1-211ENST00000554437 ATP1B2P14415 290 aaPredicted RBP3.75□□□□□ -1.81
SCFD1-211ENST00000554437 MAT2AP31153 395 aaKnown RBP3.75□□□□□ -1.81
SCFD1-211ENST00000554437 RORAP35398 523 aa3.75□□□□□ -1.81
SCFD1-211ENST00000554437 HPCAL1P37235 193 aa3.75□□□□□ -1.81
SCFD1-211ENST00000554437 SPAM1P38567 509 aa3.75□□□□□ -1.81
SCFD1-211ENST00000554437 CRYBB2P43320 205 aa3.75□□□□□ -1.81
SCFD1-211ENST00000554437 MAGEA9P43362 315 aa3.75□□□□□ -1.81
SCFD1-211ENST00000554437 GPR4P46093 362 aa3.75□□□□□ -1.81
SCFD1-211ENST00000554437 GYG1P46976 350 aa3.75□□□□□ -1.81
SCFD1-211ENST00000554437 EFNB2P52799 333 aa3.75□□□□□ -1.81
SCFD1-211ENST00000554437 PLP1P60201 277 aa3.75□□□□□ -1.81
SCFD1-211ENST00000554437 PAX2Q02962 417 aa3.75□□□□□ -1.81
SCFD1-211ENST00000554437 CD226Q15762 336 aa3.75□□□□□ -1.81
SCFD1-211ENST00000554437 CHI3L2Q15782 390 aa3.75□□□□□ -1.81
SCFD1-211ENST00000554437 MS4A13Q5J8X5 152 aa3.75□□□□□ -1.81
SCFD1-211ENST00000554437 BEND6Q5SZJ8 279 aaPredicted RBP3.75□□□□□ -1.81
SCFD1-211ENST00000554437 UTF1Q5T230 341 aa3.75□□□□□ -1.81
SCFD1-211ENST00000554437 TWF2Q6IBS0 349 aaKnown RBP3.75□□□□□ -1.81
SCFD1-211ENST00000554437 UQCC3Q6UW78 93 aa3.75□□□□□ -1.81
SCFD1-211ENST00000554437 ADAMTSL5Q6ZMM2 481 aa3.75□□□□□ -1.81
SCFD1-211ENST00000554437 UTS2BQ765I0 119 aa3.75□□□□□ -1.81
SCFD1-211ENST00000554437 ANKRD37Q7Z713 158 aa3.75□□□□□ -1.81
SCFD1-211ENST00000554437 MOB3BQ86TA1 216 aa3.75□□□□□ -1.81
SCFD1-211ENST00000554437 CCDC50Q8IVM0 306 aa3.75□□□□□ -1.81
SCFD1-211ENST00000554437 CLEC4FQ8N1N0 589 aa3.75□□□□□ -1.81
SCFD1-211ENST00000554437 PQLC3Q8N755 202 aa3.75□□□□□ -1.81
SCFD1-211ENST00000554437 OR7G2Q8NG99 324 aa3.75□□□□□ -1.81
SCFD1-211ENST00000554437 RHEBL1Q8TAI7 183 aa3.75□□□□□ -1.81
SCFD1-211ENST00000554437 NDNFQ8TB73 568 aa3.75□□□□□ -1.81
SCFD1-211ENST00000554437 CCDC12Q8WUD4 166 aaPredicted RBP3.75□□□□□ -1.81
SCFD1-211ENST00000554437 GTSF1Q8WW33 167 aa3.75□□□□□ -1.81
SCFD1-211ENST00000554437 NRGNQ92686 78 aa3.75□□□□□ -1.81
SCFD1-211ENST00000554437 TOP1MTQ969P6 601 aa3.75□□□□□ -1.81
SCFD1-211ENST00000554437 TRNT1Q96Q11 434 aaKnown RBP3.75□□□□□ -1.81
SCFD1-211ENST00000554437 TUBGCP2Q9BSJ2 902 aa3.75□□□□□ -1.81
SCFD1-211ENST00000554437 SLITRK2Q9H156 845 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms