RNA–Protein interactions for RNA: ENST00000554308.5

PPP4R3A-201, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5

Gene PPP4R3A, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-201ENST00000554308 CDCP1Q9H5V8 836 aa13.47□□□□□ -0.25
PPP4R3A-201ENST00000554308 PNO1Q9NRX1 252 aaKnown RBP13.47□□□□□ -0.25
PPP4R3A-201ENST00000554308 NUDT15Q9NV35 164 aa13.47□□□□□ -0.25
PPP4R3A-201ENST00000554308 SLCO1C1Q9NYB5 712 aa13.47□□□□□ -0.25
PPP4R3A-201ENST00000554308 SPEF1Q9Y4P9 236 aa13.47□□□□□ -0.25
PPP4R3A-201ENST00000554308 CDHR4A6H8M9 788 aa13.47□□□□□ -0.25
PPP4R3A-201ENST00000554308 PIP5K1CO60331 668 aa13.47□□□□□ -0.25
PPP4R3A-201ENST00000554308 NKX2-2O95096 273 aa13.47□□□□□ -0.25
PPP4R3A-201ENST00000554308 ZNF136P52737 540 aa13.47□□□□□ -0.25
PPP4R3A-201ENST00000554308 RIN1Q13671 783 aa13.47□□□□□ -0.25
PPP4R3A-201ENST00000554308 MZT2AQ6P582 158 aa13.47□□□□□ -0.25
PPP4R3A-201ENST00000554308 MRGPREQ86SM8 312 aa13.47□□□□□ -0.25
PPP4R3A-201ENST00000554308 C16orf52Q8NHV5 167 aa13.47□□□□□ -0.25
PPP4R3A-201ENST00000554308 CCDC74AQ96AQ1 378 aa13.47□□□□□ -0.25
PPP4R3A-201ENST00000554308 MED28Q9H204 178 aa13.47□□□□□ -0.25
PPP4R3A-201ENST00000554308 ERVMER34-1Q9H9K5 563 aa13.47□□□□□ -0.25
PPP4R3A-201ENST00000554308 OR10H1Q9Y4A9 318 aa13.47□□□□□ -0.25
PPP4R3A-201ENST00000554308 ZNF749O43361 778 aa13.46□□□□□ -0.25
PPP4R3A-201ENST00000554308 RFPL3O75679 317 aa13.46□□□□□ -0.25
PPP4R3A-201ENST00000554308 SLC22A5O76082 557 aa13.46□□□□□ -0.25
PPP4R3A-201ENST00000554308 IGKV1D-16P01601 117 aa13.46□□□□□ -0.25
PPP4R3A-201ENST00000554308 THBS1P07996 1170 aa13.46□□□□□ -0.25
PPP4R3A-201ENST00000554308 ZNF250P15622 560 aa13.46□□□□□ -0.25
PPP4R3A-201ENST00000554308 SHC1P29353 583 aa13.46□□□□□ -0.25
PPP4R3A-201ENST00000554308 ATP6V1E1P36543 226 aa13.46□□□□□ -0.25
PPP4R3A-201ENST00000554308 GPR3P46089 330 aa13.46□□□□□ -0.25
PPP4R3A-201ENST00000554308 HSD17B7P56937 341 aa13.46□□□□□ -0.25
PPP4R3A-201ENST00000554308 POU4F3Q15319 338 aa13.46□□□□□ -0.25
PPP4R3A-201ENST00000554308 VWA2Q5GFL6 755 aa13.46□□□□□ -0.25
PPP4R3A-201ENST00000554308 EXOSC6Q5RKV6 272 aaKnown RBP13.46□□□□□ -0.25
PPP4R3A-201ENST00000554308 KRT74Q7RTS7 529 aa13.46□□□□□ -0.25
PPP4R3A-201ENST00000554308 KLHL36Q8N4N3 616 aa13.46□□□□□ -0.25
PPP4R3A-201ENST00000554308 SAMD12Q8N8I0 201 aa13.46□□□□□ -0.25
PPP4R3A-201ENST00000554308 ZNF431Q8TF32 576 aaPredicted RBP13.46□□□□□ -0.25
PPP4R3A-201ENST00000554308 OR10A5Q9H207 317 aa13.46□□□□□ -0.25
PPP4R3A-201ENST00000554308 SYNDIG1Q9H7V2 258 aa13.46□□□□□ -0.25
PPP4R3A-201ENST00000554308 MED20Q9H944 212 aa13.46□□□□□ -0.25
PPP4R3A-201ENST00000554308 ENAMQ9NRM1 1142 aa13.46□□□□□ -0.25
PPP4R3A-201ENST00000554308 B3GNT2Q9NY97 397 aa13.46□□□□□ -0.25
PPP4R3A-201ENST00000554308 CLEC4AQ9UMR7 237 aa13.46□□□□□ -0.25
PPP4R3A-201ENST00000554308 FITM1A5D6W6 292 aa13.46□□□□□ -0.26
PPP4R3A-201ENST00000554308 C17orf105B2RV13 164 aa13.46□□□□□ -0.26
PPP4R3A-201ENST00000554308 H0YIG0 161 aa13.46□□□□□ -0.26
PPP4R3A-201ENST00000554308 SURF4O15260 269 aa13.46□□□□□ -0.26
PPP4R3A-201ENST00000554308 CFIP05156 583 aa13.46□□□□□ -0.26
PPP4R3A-201ENST00000554308 HK1P19367 917 aa13.46□□□□□ -0.26
PPP4R3A-201ENST00000554308 GSTM3P21266 225 aa13.46□□□□□ -0.26
PPP4R3A-201ENST00000554308 HTR2AP28223 471 aa13.46□□□□□ -0.26
PPP4R3A-201ENST00000554308 DSG2Q14126 1118 aa13.46□□□□□ -0.26
PPP4R3A-201ENST00000554308 EIPR1Q53HC9 387 aa13.46□□□□□ -0.26
PPP4R3A-201ENST00000554308 ZNF322Q6U7Q0 402 aaPredicted RBP13.46□□□□□ -0.26
PPP4R3A-201ENST00000554308 RANBP3LQ86VV4 465 aaPredicted RBP13.46□□□□□ -0.26
PPP4R3A-201ENST00000554308 LINC00471Q8N535 108 aa13.46□□□□□ -0.26
PPP4R3A-201ENST00000554308 ZNF680Q8NEM1 530 aa13.46□□□□□ -0.26
PPP4R3A-201ENST00000554308 OR51G2Q8NGK0 314 aa13.46□□□□□ -0.26
PPP4R3A-201ENST00000554308 OR2I1PQ8NGU4 316 aa13.46□□□□□ -0.26
PPP4R3A-201ENST00000554308 VSTM2LQ96N03 204 aa13.46□□□□□ -0.26
PPP4R3A-201ENST00000554308 GPR137Q96N19 417 aa13.46□□□□□ -0.26
PPP4R3A-201ENST00000554308 ABHD1Q96SE0 405 aa13.46□□□□□ -0.26
PPP4R3A-201ENST00000554308 GLTPQ9NZD2 209 aa13.46□□□□□ -0.26
PPP4R3A-201ENST00000554308 ASCC3Q8N3C0 2202 aaKnown RBP13.45□□□□□ -0.26
PPP4R3A-201ENST00000554308 SNTNA6NMZ2 147 aa13.45□□□□□ -0.26
PPP4R3A-201ENST00000554308 H3BMH7 237 aa13.45□□□□□ -0.26
PPP4R3A-201ENST00000554308 SSTR2P30874 369 aa13.45□□□□□ -0.26
PPP4R3A-201ENST00000554308 IFNGR2P38484 337 aa13.45□□□□□ -0.26
PPP4R3A-201ENST00000554308 OMPP47874 163 aa13.45□□□□□ -0.26
PPP4R3A-201ENST00000554308 ATP12AP54707 1039 aa13.45□□□□□ -0.26
PPP4R3A-201ENST00000554308 FOXL2P58012 376 aa13.45□□□□□ -0.26
PPP4R3A-201ENST00000554308 TSPAN31Q12999 210 aa13.45□□□□□ -0.26
PPP4R3A-201ENST00000554308 TEX261Q6UWH6 196 aa13.45□□□□□ -0.26
PPP4R3A-201ENST00000554308 NPSR1Q6W5P4 371 aa13.45□□□□□ -0.26
PPP4R3A-201ENST00000554308 TMPRSS9Q7Z410 1059 aa13.45□□□□□ -0.26
PPP4R3A-201ENST00000554308 ZNF321PQ8N8H1 164 aa13.45□□□□□ -0.26
PPP4R3A-201ENST00000554308 GNPDA2Q8TDQ7 276 aa13.45□□□□□ -0.26
PPP4R3A-201ENST00000554308 GRHL3Q8TE85 626 aa13.45□□□□□ -0.26
PPP4R3A-201ENST00000554308 SMAP2Q8WU79 429 aaPredicted RBP13.45□□□□□ -0.26
PPP4R3A-201ENST00000554308 ACOT11Q8WXI4 607 aaPredicted RBP13.45□□□□□ -0.26
PPP4R3A-201ENST00000554308 CNOT9Q92600 299 aaKnown RBP13.45□□□□□ -0.26
PPP4R3A-201ENST00000554308 TSLPQ969D9 159 aa13.45□□□□□ -0.26
PPP4R3A-201ENST00000554308 RFT1Q96AA3 541 aa13.45□□□□□ -0.26
PPP4R3A-201ENST00000554308 NACC2Q96BF6 587 aa13.45□□□□□ -0.26
PPP4R3A-201ENST00000554308 OMA1Q96E52 524 aa13.45□□□□□ -0.26
PPP4R3A-201ENST00000554308 NDC1Q9BTX1 674 aa13.45□□□□□ -0.26
PPP4R3A-201ENST00000554308 FGF21Q9NSA1 209 aa13.45□□□□□ -0.26
PPP4R3A-201ENST00000554308 ELF5Q9UKW6 265 aaPredicted RBP13.45□□□□□ -0.26
PPP4R3A-201ENST00000554308 U3KQ87 197 aa13.45□□□□□ -0.26
PPP4R3A-201ENST00000554308 IRGMA1A4Y4 181 aa13.45□□□□□ -0.26
PPP4R3A-201ENST00000554308 SHOXO15266 292 aa13.45□□□□□ -0.26
PPP4R3A-201ENST00000554308 CT45A8P0DMV1 189 aa13.45□□□□□ -0.26
PPP4R3A-201ENST00000554308 CT45A9P0DMV2 189 aa13.45□□□□□ -0.26
PPP4R3A-201ENST00000554308 FUT1P19526 365 aa13.45□□□□□ -0.26
PPP4R3A-201ENST00000554308 AP2S1P53680 142 aaPredicted RBP13.45□□□□□ -0.26
PPP4R3A-201ENST00000554308 OR1Q1Q15612 314 aa13.45□□□□□ -0.26
PPP4R3A-201ENST00000554308 HLA-BQ31612 363 aa13.45□□□□□ -0.26
PPP4R3A-201ENST00000554308 CT45A2Q5DJT8 189 aa13.45□□□□□ -0.26
PPP4R3A-201ENST00000554308 GUSBP11Q6P575 273 aa13.45□□□□□ -0.26
PPP4R3A-201ENST00000554308 SMARCD3Q6STE5 483 aa13.45□□□□□ -0.26
PPP4R3A-201ENST00000554308 CPOQ8IVL8 374 aa13.45□□□□□ -0.26
PPP4R3A-201ENST00000554308 BEST4Q8NFU0 473 aa13.45□□□□□ -0.26
PPP4R3A-201ENST00000554308 PIGXQ8TBF5 258 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms