RNA–Protein interactions for RNA: ENST00000553870.1

CHD8-206, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-206ENST00000553870 CXCR6O00574 342 aa8.33□□□□□ -1.08
CHD8-206ENST00000553870 GPR171O14626 319 aa8.33□□□□□ -1.08
CHD8-206ENST00000553870 EEF1E1O43324 174 aaKnown RBP8.33□□□□□ -1.08
CHD8-206ENST00000553870 FRS3O43559 492 aa8.33□□□□□ -1.08
CHD8-206ENST00000553870 TPST2O60704 377 aa8.33□□□□□ -1.08
CHD8-206ENST00000553870 FLNBO75369 2602 aaKnown RBP8.33□□□□□ -1.08
CHD8-206ENST00000553870 AHSA1O95433 338 aa8.33□□□□□ -1.08
CHD8-206ENST00000553870 CNOT4O95628 575 aaKnown RBP8.33□□□□□ -1.08
CHD8-206ENST00000553870 OPN1SWP03999 348 aa8.33□□□□□ -1.08
CHD8-206ENST00000553870 THRBP10828 461 aa8.33□□□□□ -1.08
CHD8-206ENST00000553870 HSD17B1P14061 328 aa8.33□□□□□ -1.08
CHD8-206ENST00000553870 CCNA2P20248 432 aa8.33□□□□□ -1.08
CHD8-206ENST00000553870 HTR2AP28223 471 aa8.33□□□□□ -1.08
CHD8-206ENST00000553870 IFNA8P32881 189 aa8.33□□□□□ -1.08
CHD8-206ENST00000553870 GSK3BP49841 420 aa8.33□□□□□ -1.08
CHD8-206ENST00000553870 CRYBA2P53672 197 aa8.33□□□□□ -1.08
CHD8-206ENST00000553870 SLC16A1P53985 500 aa8.33□□□□□ -1.08
CHD8-206ENST00000553870 OR2B6P58173 313 aa8.33□□□□□ -1.08
CHD8-206ENST00000553870 HOXC5Q00444 222 aa8.33□□□□□ -1.08
CHD8-206ENST00000553870 FXNQ16595 210 aa8.33□□□□□ -1.08
CHD8-206ENST00000553870 CYBRD1Q53TN4 286 aa8.33□□□□□ -1.08
CHD8-206ENST00000553870 ALG10BQ5I7T1 473 aa8.33□□□□□ -1.08
CHD8-206ENST00000553870 SAMD4BQ5PRF9 694 aaKnown RBP8.33□□□□□ -1.08
CHD8-206ENST00000553870 C1orf140Q5VVS0 124 aa8.33□□□□□ -1.08
CHD8-206ENST00000553870 PAQR6Q6TCH4 344 aa8.33□□□□□ -1.08
CHD8-206ENST00000553870 PLXDC2Q6UX71 529 aa8.33□□□□□ -1.08
CHD8-206ENST00000553870 LINC00114Q6XXX2 140 aa8.33□□□□□ -1.08
CHD8-206ENST00000553870 STK32CQ86UX6 486 aa8.33□□□□□ -1.08
CHD8-206ENST00000553870 COMTD1Q86VU5 262 aa8.33□□□□□ -1.08
CHD8-206ENST00000553870 GCNT2Q8N0V5 402 aa8.33□□□□□ -1.08
CHD8-206ENST00000553870 INTS1Q8N201 2190 aaKnown RBP8.33□□□□□ -1.08
CHD8-206ENST00000553870 ARHGAP24Q8N264 748 aa8.33□□□□□ -1.08
CHD8-206ENST00000553870 OR6T1Q8NGN1 323 aa8.33□□□□□ -1.08
CHD8-206ENST00000553870 EPYCQ99645 322 aa8.33□□□□□ -1.08
CHD8-206ENST00000553870 TMEM43Q9BTV4 400 aa8.33□□□□□ -1.08
CHD8-206ENST00000553870 SF3B5Q9BWJ5 86 aaKnown RBP8.33□□□□□ -1.08
CHD8-206ENST00000553870 RBM24Q9BX46 236 aaKnown RBP8.33□□□□□ -1.08
CHD8-206ENST00000553870 OR11A1Q9GZK7 315 aa8.33□□□□□ -1.08
CHD8-206ENST00000553870 NPDC1Q9NQX5 325 aaPredicted RBP8.33□□□□□ -1.08
CHD8-206ENST00000553870 ADA2Q9NZK5 511 aa8.33□□□□□ -1.08
CHD8-206ENST00000553870 EMC3Q9P0I2 261 aa8.33□□□□□ -1.08
CHD8-206ENST00000553870 KLHL13Q9P2N7 655 aa8.33□□□□□ -1.08
CHD8-206ENST00000553870 KCNN3Q9UGI6 736 aa8.33□□□□□ -1.08
CHD8-206ENST00000553870 CACNA1CQ13936 2221 aa8.33□□□□□ -1.08
CHD8-206ENST00000553870 COL12A1Q99715 3063 aa8.33□□□□□ -1.08
CHD8-206ENST00000553870 TRAV36DV7A0A075B6V5 113 aa8.32□□□□□ -1.08
CHD8-206ENST00000553870 ZC3H12DA2A288 527 aaKnown RBP8.32□□□□□ -1.08
CHD8-206ENST00000553870 TRAPPC13A5PLN9 417 aa8.32□□□□□ -1.08
CHD8-206ENST00000553870 HTR3EA5X5Y0 456 aa8.32□□□□□ -1.08
CHD8-206ENST00000553870 SMAD9O15198 467 aaKnown RBP8.32□□□□□ -1.08
CHD8-206ENST00000553870 CHP2O43745 196 aa8.32□□□□□ -1.08
CHD8-206ENST00000553870 FZD7O75084 574 aa8.32□□□□□ -1.08
CHD8-206ENST00000553870 SMNDC1O75940 238 aaKnown RBP eCLIP8.32□□□□□ -1.082e-27■■■□□ 17.8
CHD8-206ENST00000553870 IMPDH2P12268 514 aa8.32□□□□□ -1.08
CHD8-206ENST00000553870 GGT1P19440 569 aa8.32□□□□□ -1.08
CHD8-206ENST00000553870 FPR1P21462 350 aa8.32□□□□□ -1.08
CHD8-206ENST00000553870 COL8A1P27658 744 aa8.32□□□□□ -1.08
CHD8-206ENST00000553870 AGTR1P30556 359 aa8.32□□□□□ -1.08
CHD8-206ENST00000553870 UQCRC1P31930 480 aa8.32□□□□□ -1.08
CHD8-206ENST00000553870 CPA2P48052 419 aa8.32□□□□□ -1.08
CHD8-206ENST00000553870 EGR4Q05215 589 aa8.32□□□□□ -1.08
CHD8-206ENST00000553870 CEACAM7Q14002 265 aa8.32□□□□□ -1.08
CHD8-206ENST00000553870 ENTPD8Q5MY95 495 aa8.32□□□□□ -1.08
CHD8-206ENST00000553870 FAM69AQ5T7M9 428 aa8.32□□□□□ -1.08
CHD8-206ENST00000553870 GLYATQ6IB77 296 aa8.32□□□□□ -1.08
CHD8-206ENST00000553870 VWA1Q6PCB0 445 aa8.32□□□□□ -1.08
CHD8-206ENST00000553870 MEX3BQ6ZN04 569 aaKnown RBP8.32□□□□□ -1.08
CHD8-206ENST00000553870 BEND4Q6ZU67 534 aa8.32□□□□□ -1.08
CHD8-206ENST00000553870 CBLL1Q75N03 491 aa8.32□□□□□ -1.08
CHD8-206ENST00000553870 GALNT5Q7Z7M9 940 aa8.32□□□□□ -1.08
CHD8-206ENST00000553870 CARM1Q86X55 608 aa8.32□□□□□ -1.08
CHD8-206ENST00000553870 TUSC5Q8IXB3 177 aa8.32□□□□□ -1.08
CHD8-206ENST00000553870 ADAMTS16Q8TE57 1224 aa8.32□□□□□ -1.08
CHD8-206ENST00000553870 ABHD3Q8WU67 409 aa8.32□□□□□ -1.08
CHD8-206ENST00000553870 C14orf79Q96F83 325 aa8.32□□□□□ -1.08
CHD8-206ENST00000553870 CDRT15Q96T59 188 aa8.32□□□□□ -1.08
CHD8-206ENST00000553870 USB1Q9BQ65 265 aaKnown RBP8.32□□□□□ -1.08
CHD8-206ENST00000553870 PSD2Q9BQI7 771 aa8.32□□□□□ -1.08
CHD8-206ENST00000553870 WFDC6Q9BQY6 131 aa8.32□□□□□ -1.08
CHD8-206ENST00000553870 HDHD5Q9BXW7 423 aa8.32□□□□□ -1.08
CHD8-206ENST00000553870 SLC19A3Q9BZV2 496 aa8.32□□□□□ -1.08
CHD8-206ENST00000553870 C1orf21Q9H246 121 aa8.32□□□□□ -1.08
CHD8-206ENST00000553870 GORASP2Q9H8Y8 452 aa8.32□□□□□ -1.08
CHD8-206ENST00000553870 PARPBPQ9NWS1 579 aa8.32□□□□□ -1.08
CHD8-206ENST00000553870 CD300AQ9UGN4 299 aa8.32□□□□□ -1.08
CHD8-206ENST00000553870 RPS6KA6Q9UK32 745 aa8.32□□□□□ -1.08
CHD8-206ENST00000553870 ING1Q9UK53 422 aaPredicted RBP8.32□□□□□ -1.08
CHD8-206ENST00000553870 USP22Q9UPT9 525 aa8.32□□□□□ -1.08
CHD8-206ENST00000553870 B3GALT5Q9Y2C3 310 aa8.32□□□□□ -1.08
CHD8-206ENST00000553870 SH3GLB1Q9Y371 365 aa8.32□□□□□ -1.08
CHD8-206ENST00000553870 KIAA1549Q9HCM3 1950 aa8.31□□□□□ -1.08
CHD8-206ENST00000553870 ASH1LQ9NR48 2969 aaKnown RBP8.31□□□□□ -1.08
CHD8-206ENST00000553870 HCFC1P51610 2035 aa8.31□□□□□ -1.08
CHD8-206ENST00000553870 LOC102725191A0A1B0GVB3 256 aa8.31□□□□□ -1.08
CHD8-206ENST00000553870 TUBAL3A6NHL2 446 aa8.31□□□□□ -1.08
CHD8-206ENST00000553870 AQP7P3A6NL99 342 aa8.31□□□□□ -1.08
CHD8-206ENST00000553870 ZNF716A6NP11 495 aa8.31□□□□□ -1.08
CHD8-206ENST00000553870 B2RBV5 119 aa8.31□□□□□ -1.08
CHD8-206ENST00000553870 FTCDNL1E5RQL4 147 aa8.31□□□□□ -1.08
CHD8-206ENST00000553870 M0R3H8 397 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 145.1 ms