RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 DOK4Q8TEW6 326 aa11.84□□□□□ -0.51
SHMT2-205ENST00000553474 CAPSLQ8WWF8 208 aa11.84□□□□□ -0.51
SHMT2-205ENST00000553474 PEX11GQ96HA9 241 aa11.84□□□□□ -0.51
SHMT2-205ENST00000553474 ART5Q96L15 291 aa11.84□□□□□ -0.51
SHMT2-205ENST00000553474 NDEL1Q9GZM8 345 aa11.84□□□□□ -0.51
SHMT2-205ENST00000553474 RAB33BQ9H082 229 aa11.84□□□□□ -0.51
SHMT2-205ENST00000553474 B3GAT2Q9NPZ5 323 aa11.84□□□□□ -0.51
SHMT2-205ENST00000553474 ST6GALNAC2Q9UJ37 374 aa11.84□□□□□ -0.51
SHMT2-205ENST00000553474 CYP8B1Q9UNU6 501 aa11.84□□□□□ -0.51
SHMT2-205ENST00000553474 SLC6A5Q9Y345 797 aa11.84□□□□□ -0.51
SHMT2-205ENST00000553474 OR10H1Q9Y4A9 318 aa11.84□□□□□ -0.51
SHMT2-205ENST00000553474 CLDN16Q9Y5I7 305 aa11.84□□□□□ -0.51
SHMT2-205ENST00000553474 NOTOA8MTQ0 251 aa11.84□□□□□ -0.51
SHMT2-205ENST00000553474 B4DGG1 531 aa11.84□□□□□ -0.51
SHMT2-205ENST00000553474 IMPA2O14732 288 aa11.84□□□□□ -0.51
SHMT2-205ENST00000553474 OR7A10O76100 309 aa11.84□□□□□ -0.51
SHMT2-205ENST00000553474 CSF2P04141 144 aa11.84□□□□□ -0.51
SHMT2-205ENST00000553474 PROS1P07225 676 aa11.84□□□□□ -0.51
SHMT2-205ENST00000553474 PSKH1P11801 424 aa11.84□□□□□ -0.51
SHMT2-205ENST00000553474 NME1P15531 152 aaKnown RBP11.84□□□□□ -0.51
SHMT2-205ENST00000553474 HIST1H1CP16403 213 aaKnown RBP11.84□□□□□ -0.51
SHMT2-205ENST00000553474 SHC1P29353 583 aa11.84□□□□□ -0.51
SHMT2-205ENST00000553474 OR12D2P58182 307 aa11.84□□□□□ -0.51
SHMT2-205ENST00000553474 BTG1P62324 171 aa11.84□□□□□ -0.51
SHMT2-205ENST00000553474 SIRPAP78324 504 aa11.84□□□□□ -0.51
SHMT2-205ENST00000553474 MRPS15P82914 257 aaKnown RBP11.84□□□□□ -0.51
SHMT2-205ENST00000553474 PITPNAQ00169 270 aa11.84□□□□□ -0.51
SHMT2-205ENST00000553474 IFITM2Q01629 132 aa11.84□□□□□ -0.51
SHMT2-205ENST00000553474 MRPL28Q13084 256 aaKnown RBP11.84□□□□□ -0.51
SHMT2-205ENST00000553474 COL9A2Q14055 689 aaPredicted RBP11.84□□□□□ -0.51
SHMT2-205ENST00000553474 CDK5R1Q15078 307 aa11.84□□□□□ -0.51
SHMT2-205ENST00000553474 TATDN3Q17R31 274 aa11.84□□□□□ -0.51
SHMT2-205ENST00000553474 DEFB110Q30KQ9 67 aa11.84□□□□□ -0.51
SHMT2-205ENST00000553474 KLHL26Q53HC5 615 aa11.84□□□□□ -0.51
SHMT2-205ENST00000553474 WBP2NLQ6ICG8 309 aa11.84□□□□□ -0.51
SHMT2-205ENST00000553474 KCTD20Q7Z5Y7 419 aa11.84□□□□□ -0.51
SHMT2-205ENST00000553474 CDH24Q86UP0 819 aa11.84□□□□□ -0.51
SHMT2-205ENST00000553474 CADM2Q8N3J6 435 aa11.84□□□□□ -0.51
SHMT2-205ENST00000553474 ZNF615Q8N8J6 731 aa11.84□□□□□ -0.51
SHMT2-205ENST00000553474 OR4N2Q8NGD1 307 aa11.84□□□□□ -0.51
SHMT2-205ENST00000553474 GHSRQ92847 366 aa11.84□□□□□ -0.51
SHMT2-205ENST00000553474 RFT1Q96AA3 541 aa11.84□□□□□ -0.51
SHMT2-205ENST00000553474 MRI1Q9BV20 369 aa11.84□□□□□ -0.51
SHMT2-205ENST00000553474 GPR174Q9BXC1 333 aa11.84□□□□□ -0.51
SHMT2-205ENST00000553474 NMNAT2Q9BZQ4 307 aa11.84□□□□□ -0.51
SHMT2-205ENST00000553474 PCED1AQ9H1Q7 454 aa11.84□□□□□ -0.51
SHMT2-205ENST00000553474 TP63Q9H3D4 680 aaPredicted RBP11.84□□□□□ -0.51
SHMT2-205ENST00000553474 C12orf10Q9HB07 376 aa11.84□□□□□ -0.51
SHMT2-205ENST00000553474 CAPN10Q9HC96 672 aa11.84□□□□□ -0.51
SHMT2-205ENST00000553474 UBQLN4Q9NRR5 601 aa11.84□□□□□ -0.51
SHMT2-205ENST00000553474 HCN3Q9P1Z3 774 aa11.84□□□□□ -0.51
SHMT2-205ENST00000553474 MRTO4Q9UKD2 239 aaKnown RBP11.84□□□□□ -0.51
SHMT2-205ENST00000553474 MMACHCQ9Y4U1 282 aa11.84□□□□□ -0.51
SHMT2-205ENST00000553474 CEP192Q8TEP8 1941 aa11.84□□□□□ -0.51
SHMT2-205ENST00000553474 ARPC4-TTLL3A0A0A6YYG9 625 aa11.83□□□□□ -0.52
SHMT2-205ENST00000553474 A0A0G2JK05 382 aa11.83□□□□□ -0.52
SHMT2-205ENST00000553474 TLCD2A6NGC4 264 aa11.83□□□□□ -0.52
SHMT2-205ENST00000553474 ZNF879B4DU55 563 aa11.83□□□□□ -0.52
SHMT2-205ENST00000553474 E9PI62 339 aa11.83□□□□□ -0.52
SHMT2-205ENST00000553474 TGFBR3LH3BV60 316 aa11.83□□□□□ -0.52
SHMT2-205ENST00000553474 LAMTOR5O43504 91 aa11.83□□□□□ -0.52
SHMT2-205ENST00000553474 MRPL3P09001 348 aaKnown RBP11.83□□□□□ -0.52
SHMT2-205ENST00000553474 CLUP10909 449 aa11.83□□□□□ -0.52
SHMT2-205ENST00000553474 ERP29P30040 261 aaKnown RBP11.83□□□□□ -0.52
SHMT2-205ENST00000553474 SLC6A1P30531 599 aa11.83□□□□□ -0.52
SHMT2-205ENST00000553474 GABRA4P48169 554 aa11.83□□□□□ -0.52
SHMT2-205ENST00000553474 E2F1Q01094 437 aa11.83□□□□□ -0.52
SHMT2-205ENST00000553474 SLC3A1Q07837 685 aa11.83□□□□□ -0.52
SHMT2-205ENST00000553474 CDK10Q15131 360 aa11.83□□□□□ -0.52
SHMT2-205ENST00000553474 ZNF542PQ5EBM4 170 aa11.83□□□□□ -0.52
SHMT2-205ENST00000553474 OVCH1Q7RTY7 1134 aa11.83□□□□□ -0.52
SHMT2-205ENST00000553474 NOXA1Q86UR1 476 aa11.83□□□□□ -0.52
SHMT2-205ENST00000553474 ZNF761Q86XN6 746 aaPredicted RBP11.83□□□□□ -0.52
SHMT2-205ENST00000553474 SLC35F2Q8IXU6 374 aa11.83□□□□□ -0.52
SHMT2-205ENST00000553474 CYB561A3Q8NBI2 242 aa11.83□□□□□ -0.52
SHMT2-205ENST00000553474 C17orf47Q8NEP4 570 aa11.83□□□□□ -0.52
SHMT2-205ENST00000553474 THAP4Q8WY91 577 aa11.83□□□□□ -0.52
SHMT2-205ENST00000553474 C3orf49Q96BT1 292 aa11.83□□□□□ -0.52
SHMT2-205ENST00000553474 MVB12AQ96EY5 273 aa11.83□□□□□ -0.52
SHMT2-205ENST00000553474 SPACA7Q96KW9 195 aa11.83□□□□□ -0.52
SHMT2-205ENST00000553474 ORAI3Q9BRQ5 295 aa11.83□□□□□ -0.52
SHMT2-205ENST00000553474 IER2Q9BTL4 223 aa11.83□□□□□ -0.52
SHMT2-205ENST00000553474 MOKQ9UQ07 419 aa11.83□□□□□ -0.52
SHMT2-205ENST00000553474 RASD1Q9Y272 281 aa11.83□□□□□ -0.52
SHMT2-205ENST00000553474 IER3IP1Q9Y5U9 82 aa11.83□□□□□ -0.52
SHMT2-205ENST00000553474 HEATR5AQ86XA9 2040 aa11.83□□□□□ -0.52
SHMT2-205ENST00000553474 FAM47E-STBD1D6RA91 191 aa11.82□□□□□ -0.52
SHMT2-205ENST00000553474 UBL3O95164 117 aa11.82□□□□□ -0.52
SHMT2-205ENST00000553474 SLC34A2O95436 690 aa11.82□□□□□ -0.52
SHMT2-205ENST00000553474 UCHL1P09936 223 aa11.82□□□□□ -0.52
SHMT2-205ENST00000553474 RPL4P36578 427 aaKnown RBP11.82□□□□□ -0.52
SHMT2-205ENST00000553474 GRK6P43250 576 aa11.82□□□□□ -0.52
SHMT2-205ENST00000553474 NKX2-5P52952 324 aaPredicted RBP11.82□□□□□ -0.52
SHMT2-205ENST00000553474 C1orf61Q13536 156 aa11.82□□□□□ -0.52
SHMT2-205ENST00000553474 GRM7Q14831 915 aa11.82□□□□□ -0.52
SHMT2-205ENST00000553474 SF3B4Q15427 424 aaKnown RBP eCLIP11.82□□□□□ -0.523e-8■■■■■ 35.5
SHMT2-205ENST00000553474 HSD17B12Q53GQ0 312 aa11.82□□□□□ -0.52
SHMT2-205ENST00000553474 ZNF57Q68EA5 555 aaPredicted RBP11.82□□□□□ -0.52
SHMT2-205ENST00000553474 SLC6A19Q695T7 634 aa11.82□□□□□ -0.52
SHMT2-205ENST00000553474 ZC3H14Q6PJT7 736 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms