RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 C22orf42Q6IC83 251 aa10.48□□□□□ -0.73
RAB5C-208ENST00000551338 MRPL14Q6P1L8 145 aaKnown RBP10.48□□□□□ -0.73
RAB5C-208ENST00000551338 TMEM205Q6UW68 189 aa10.48□□□□□ -0.73
RAB5C-208ENST00000551338 KLBQ86Z14 1044 aa10.48□□□□□ -0.73
RAB5C-208ENST00000551338 SNX29P2Q8IUI4 249 aa10.48□□□□□ -0.73
RAB5C-208ENST00000551338 SYT14Q8NB59 555 aa10.48□□□□□ -0.73
RAB5C-208ENST00000551338 FAM98AQ8NCA5 519 aaKnown RBP10.48□□□□□ -0.73
RAB5C-208ENST00000551338 ATP6V1C2Q8NEY4 427 aa10.48□□□□□ -0.73
RAB5C-208ENST00000551338 OR5W2Q8NH69 310 aa10.48□□□□□ -0.73
RAB5C-208ENST00000551338 NUBPLQ8TB37 319 aa10.48□□□□□ -0.73
RAB5C-208ENST00000551338 CHPT1Q8WUD6 406 aa10.48□□□□□ -0.73
RAB5C-208ENST00000551338 HGDQ93099 445 aa10.48□□□□□ -0.73
RAB5C-208ENST00000551338 TMEM203Q969S6 136 aa10.48□□□□□ -0.73
RAB5C-208ENST00000551338 RASD2Q96D21 266 aa10.48□□□□□ -0.73
RAB5C-208ENST00000551338 DEPDC7Q96QD5 511 aa10.48□□□□□ -0.73
RAB5C-208ENST00000551338 KATNB1Q9BVA0 655 aa10.48□□□□□ -0.73
RAB5C-208ENST00000551338 GTPBP2Q9BX10 602 aaKnown RBP10.48□□□□□ -0.73
RAB5C-208ENST00000551338 NMNAT2Q9BZQ4 307 aa10.48□□□□□ -0.73
RAB5C-208ENST00000551338 C6orf62Q9GZU0 229 aaPredicted RBP10.48□□□□□ -0.73
RAB5C-208ENST00000551338 SLC26A1Q9H2B4 701 aa10.48□□□□□ -0.73
RAB5C-208ENST00000551338 SMOC1Q9H4F8 434 aa10.48□□□□□ -0.73
RAB5C-208ENST00000551338 ISG20L2Q9H9L3 353 aaKnown RBP10.48□□□□□ -0.73
RAB5C-208ENST00000551338 SIAEQ9HAT2 523 aa10.48□□□□□ -0.73
RAB5C-208ENST00000551338 INPP5EQ9NRR6 644 aa10.48□□□□□ -0.73
RAB5C-208ENST00000551338 SLC6A5Q9Y345 797 aa10.48□□□□□ -0.73
RAB5C-208ENST00000551338 NPFFR2Q9Y5X5 522 aa10.48□□□□□ -0.73
RAB5C-208ENST00000551338 PEX16Q9Y5Y5 336 aa10.48□□□□□ -0.73
RAB5C-208ENST00000551338 TRBV11-1A0A0K0K1C0 115 aa10.47□□□□□ -0.73
RAB5C-208ENST00000551338 DAPL1A0PJW8 107 aa10.47□□□□□ -0.73
RAB5C-208ENST00000551338 TMEM200CA6NKL6 621 aa10.47□□□□□ -0.73
RAB5C-208ENST00000551338 TAF4O00268 1085 aa10.47□□□□□ -0.73
RAB5C-208ENST00000551338 IMPA2O14732 288 aa10.47□□□□□ -0.73
RAB5C-208ENST00000551338 KHNYNO15037 678 aaKnown RBP10.47□□□□□ -0.73
RAB5C-208ENST00000551338 GMFGO60234 142 aa10.47□□□□□ -0.73
RAB5C-208ENST00000551338 CPNE3O75131 537 aaKnown RBP10.47□□□□□ -0.73
RAB5C-208ENST00000551338 CDRT1O95170 752 aa10.47□□□□□ -0.73
RAB5C-208ENST00000551338 WISP1O95388 367 aa10.47□□□□□ -0.73
RAB5C-208ENST00000551338 IL1AP01583 271 aa10.47□□□□□ -0.73
RAB5C-208ENST00000551338 SYPP08247 313 aa10.47□□□□□ -0.73
RAB5C-208ENST00000551338 CYC1P08574 325 aa10.47□□□□□ -0.73
RAB5C-208ENST00000551338 ASAH2BP0C7U1 165 aa10.47□□□□□ -0.73
RAB5C-208ENST00000551338 GP1BBP13224 206 aa10.47□□□□□ -0.73
RAB5C-208ENST00000551338 ZNF12P17014 697 aa10.47□□□□□ -0.73
RAB5C-208ENST00000551338 ZNF28P17035 718 aa10.47□□□□□ -0.73
RAB5C-208ENST00000551338 PGCP20142 388 aa10.47□□□□□ -0.73
RAB5C-208ENST00000551338 FGF9P31371 208 aaPredicted RBP10.47□□□□□ -0.73
RAB5C-208ENST00000551338 RPL4P36578 427 aaKnown RBP10.47□□□□□ -0.73
RAB5C-208ENST00000551338 AQP2P41181 271 aa10.47□□□□□ -0.73
RAB5C-208ENST00000551338 ETV6P41212 452 aa10.47□□□□□ -0.73
RAB5C-208ENST00000551338 PPP5CP53041 499 aa10.47□□□□□ -0.73
RAB5C-208ENST00000551338 SLC16A1P53985 500 aa10.47□□□□□ -0.73
RAB5C-208ENST00000551338 PRPS1P60891 318 aa10.47□□□□□ -0.73
RAB5C-208ENST00000551338 ERVK-25P63136 954 aa10.47□□□□□ -0.73
RAB5C-208ENST00000551338 ZFP36L1Q07352 338 aaKnown RBP10.47□□□□□ -0.73
RAB5C-208ENST00000551338 POU4F2Q12837 409 aa10.47□□□□□ -0.73
RAB5C-208ENST00000551338 EFR3AQ14156 821 aa10.47□□□□□ -0.73
RAB5C-208ENST00000551338 GGTLC2Q14390 218 aa10.47□□□□□ -0.73
RAB5C-208ENST00000551338 QPRTQ15274 297 aa10.47□□□□□ -0.73
RAB5C-208ENST00000551338 LPAL2Q16609 132 aa10.47□□□□□ -0.73
RAB5C-208ENST00000551338 C11orf91Q3C1V1 193 aa10.47□□□□□ -0.73
RAB5C-208ENST00000551338 CRTC2Q53ET0 693 aaPredicted RBP10.47□□□□□ -0.73
RAB5C-208ENST00000551338 LCN1P1Q5VSP4 162 aa10.47□□□□□ -0.73
RAB5C-208ENST00000551338 TUBA3EQ6PEY2 450 aa10.47□□□□□ -0.73
RAB5C-208ENST00000551338 FAM198BQ6UWH4 519 aa10.47□□□□□ -0.73
RAB5C-208ENST00000551338 DCDC5Q6ZRR9 648 aa10.47□□□□□ -0.73
RAB5C-208ENST00000551338 FAM122BQ7Z309 247 aa10.47□□□□□ -0.73
RAB5C-208ENST00000551338 NUP54Q7Z3B4 507 aa10.47□□□□□ -0.73
RAB5C-208ENST00000551338 CPEB2Q7Z5Q1 589 aaKnown RBP10.47□□□□□ -0.73
RAB5C-208ENST00000551338 BPHLQ86WA6 291 aaPredicted RBP10.47□□□□□ -0.73
RAB5C-208ENST00000551338 CENPSQ8N2Z9 138 aa10.47□□□□□ -0.73
RAB5C-208ENST00000551338 ARIH2OSQ8N7S6 290 aa10.47□□□□□ -0.73
RAB5C-208ENST00000551338 LSM14AQ8ND56 463 aaKnown RBP10.47□□□□□ -0.73
RAB5C-208ENST00000551338 NPEPL1Q8NDH3 523 aa10.47□□□□□ -0.73
RAB5C-208ENST00000551338 OR10H4Q8NGA5 316 aa10.47□□□□□ -0.73
RAB5C-208ENST00000551338 RNF138Q8WVD3 245 aa10.47□□□□□ -0.73
RAB5C-208ENST00000551338 ZNRF4Q8WWF5 429 aa10.47□□□□□ -0.73
RAB5C-208ENST00000551338 METTL21AQ8WXB1 218 aa10.47□□□□□ -0.73
RAB5C-208ENST00000551338 SMPDL3BQ92485 455 aa10.47□□□□□ -0.73
RAB5C-208ENST00000551338 ZMYND19Q96E35 227 aaPredicted RBP10.47□□□□□ -0.73
RAB5C-208ENST00000551338 KTI12Q96EK9 354 aaPredicted RBP10.47□□□□□ -0.73
RAB5C-208ENST00000551338 DCLRE1CQ96SD1 692 aaKnown RBP10.47□□□□□ -0.73
RAB5C-208ENST00000551338 TM9SF2Q99805 663 aa10.47□□□□□ -0.73
RAB5C-208ENST00000551338 KCNS3Q9BQ31 491 aa10.47□□□□□ -0.73
RAB5C-208ENST00000551338 CRB3Q9BUF7 120 aa10.47□□□□□ -0.73
RAB5C-208ENST00000551338 NUAK2Q9H093 628 aa10.47□□□□□ -0.73
RAB5C-208ENST00000551338 AKIRIN1Q9H9L7 192 aaPredicted RBP10.47□□□□□ -0.73
RAB5C-208ENST00000551338 KLHL1Q9NR64 748 aa10.47□□□□□ -0.73
RAB5C-208ENST00000551338 SNTG1Q9NSN8 517 aa10.47□□□□□ -0.73
RAB5C-208ENST00000551338 FAIMQ9NVQ4 179 aa10.47□□□□□ -0.73
RAB5C-208ENST00000551338 ASB6Q9NWX5 421 aa10.47□□□□□ -0.73
RAB5C-208ENST00000551338 QPCTLQ9NXS2 382 aa10.47□□□□□ -0.73
RAB5C-208ENST00000551338 TAS2R10Q9NYW0 307 aa10.47□□□□□ -0.73
RAB5C-208ENST00000551338 ZMIZ1Q9ULJ6 1067 aa10.47□□□□□ -0.73
RAB5C-208ENST00000551338 SIRT4Q9Y6E7 314 aaPredicted RBP10.47□□□□□ -0.73
RAB5C-208ENST00000551338 EYSQ5T1H1 3165 aa10.47□□□□□ -0.73
RAB5C-208ENST00000551338 TEX13CA0A0J9YWL9 993 aa10.46□□□□□ -0.73
RAB5C-208ENST00000551338 TMEM72A0PK05 275 aa10.46□□□□□ -0.73
RAB5C-208ENST00000551338 OR6C68A6NDL8 312 aa10.46□□□□□ -0.73
RAB5C-208ENST00000551338 C4orf47A7E2U8 309 aa10.46□□□□□ -0.73
RAB5C-208ENST00000551338 MEN1O00255 615 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms