RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 RAMP1O60894 148 aa3.29□□□□□ -1.88
SFSWAP-211ENST00000542813 H6PDO95479 791 aa3.29□□□□□ -1.88
SFSWAP-211ENST00000542813 LGI1O95970 557 aa3.29□□□□□ -1.88
SFSWAP-211ENST00000542813 IGHG3P01860 377 aa3.29□□□□□ -1.88
SFSWAP-211ENST00000542813 GAPDHP04406 335 aaKnown RBP3.29□□□□□ -1.88
SFSWAP-211ENST00000542813 CD1CP29017 333 aa3.29□□□□□ -1.88
SFSWAP-211ENST00000542813 OTX1P32242 354 aaPredicted RBP3.29□□□□□ -1.88
SFSWAP-211ENST00000542813 RPS5P46782 204 aaKnown RBP3.29□□□□□ -1.88
SFSWAP-211ENST00000542813 GNPDA1P46926 289 aa3.29□□□□□ -1.88
SFSWAP-211ENST00000542813 CSNK1EP49674 416 aaKnown RBP3.29□□□□□ -1.88
SFSWAP-211ENST00000542813 RAB9AP51151 201 aa3.29□□□□□ -1.88
SFSWAP-211ENST00000542813 FOXG1P55316 489 aaPredicted RBP3.29□□□□□ -1.88
SFSWAP-211ENST00000542813 ERVK-16P61578 105 aa3.29□□□□□ -1.88
SFSWAP-211ENST00000542813 KLRC3Q07444 240 aa3.29□□□□□ -1.88
SFSWAP-211ENST00000542813 PPIDQ08752 370 aaKnown RBP3.29□□□□□ -1.88
SFSWAP-211ENST00000542813 RIPPLY1Q0D2K3 151 aa3.29□□□□□ -1.88
SFSWAP-211ENST00000542813 RAB40BQ12829 278 aa3.29□□□□□ -1.88
SFSWAP-211ENST00000542813 KIAA0141Q14154 515 aaPredicted RBP3.29□□□□□ -1.88
SFSWAP-211ENST00000542813 CRMP1Q14194 572 aa3.29□□□□□ -1.88
SFSWAP-211ENST00000542813 KLHL38Q2WGJ6 581 aa3.29□□□□□ -1.88
SFSWAP-211ENST00000542813 SBK1Q52WX2 424 aa3.29□□□□□ -1.88
SFSWAP-211ENST00000542813 HIKESHIQ53FT3 197 aa3.29□□□□□ -1.88
SFSWAP-211ENST00000542813 WSCD1Q658N2 575 aa3.29□□□□□ -1.88
SFSWAP-211ENST00000542813 OR8G2PQ6IF36 304 aa3.29□□□□□ -1.88
SFSWAP-211ENST00000542813 TMEM53Q6P2H8 277 aa3.29□□□□□ -1.88
SFSWAP-211ENST00000542813 FAHD2BQ6P2I3 314 aaPredicted RBP3.29□□□□□ -1.88
SFSWAP-211ENST00000542813 C19orf48Q6RUI8 117 aa3.29□□□□□ -1.88
SFSWAP-211ENST00000542813 APOOLQ6UXV4 268 aa3.29□□□□□ -1.88
SFSWAP-211ENST00000542813 GDPD4Q6W3E5 623 aa3.29□□□□□ -1.88
SFSWAP-211ENST00000542813 NCCRP1Q6ZVX7 275 aaPredicted RBP3.29□□□□□ -1.88
SFSWAP-211ENST00000542813 TRIM69Q86WT6 500 aa3.29□□□□□ -1.88
SFSWAP-211ENST00000542813 SLC7A5P1Q8MH63 180 aa3.29□□□□□ -1.88
SFSWAP-211ENST00000542813 C15orf54Q8N8G6 183 aa3.29□□□□□ -1.88
SFSWAP-211ENST00000542813 SAMD12Q8N8I0 201 aa3.29□□□□□ -1.88
SFSWAP-211ENST00000542813 OR1L6Q8NGR2 347 aa3.29□□□□□ -1.88
SFSWAP-211ENST00000542813 OR8K3Q8NH51 312 aa3.29□□□□□ -1.88
SFSWAP-211ENST00000542813 SPPL2AQ8TCT8 520 aa3.29□□□□□ -1.88
SFSWAP-211ENST00000542813 AENQ8WTP8 325 aaKnown RBP3.29□□□□□ -1.88
SFSWAP-211ENST00000542813 RAB3CQ96E17 227 aa3.29□□□□□ -1.88
SFSWAP-211ENST00000542813 FAHD2AQ96GK7 314 aa3.29□□□□□ -1.88
SFSWAP-211ENST00000542813 ZNF300Q96RE9 604 aaPredicted RBP3.29□□□□□ -1.88
SFSWAP-211ENST00000542813 TGS1Q96RS0 853 aaKnown RBP3.29□□□□□ -1.88
SFSWAP-211ENST00000542813 CGREF1Q99674 301 aa3.29□□□□□ -1.88
SFSWAP-211ENST00000542813 CABLES2Q9BTV7 478 aa3.29□□□□□ -1.88
SFSWAP-211ENST00000542813 C20orf24Q9BUV8 137 aa3.29□□□□□ -1.88
SFSWAP-211ENST00000542813 SPATA16Q9BXB7 569 aa3.29□□□□□ -1.88
SFSWAP-211ENST00000542813 SLC7A5P2Q9GIP4 190 aa3.29□□□□□ -1.88
SFSWAP-211ENST00000542813 SLITRK2Q9H156 845 aa3.29□□□□□ -1.88
SFSWAP-211ENST00000542813 HAUS4Q9H6D7 363 aa3.29□□□□□ -1.88
SFSWAP-211ENST00000542813 WDR41Q9HAD4 459 aa3.29□□□□□ -1.88
SFSWAP-211ENST00000542813 NT5MQ9NPB1 228 aa3.29□□□□□ -1.88
SFSWAP-211ENST00000542813 CHRAC1Q9NRG0 131 aa3.29□□□□□ -1.88
SFSWAP-211ENST00000542813 MRPL22Q9NWU5 206 aaKnown RBP3.29□□□□□ -1.88
SFSWAP-211ENST00000542813 PEF1Q9UBV8 284 aaKnown RBP3.29□□□□□ -1.88
SFSWAP-211ENST00000542813 VANGL2Q9ULK5 521 aa3.29□□□□□ -1.88
SFSWAP-211ENST00000542813 TBC1D24Q9ULP9 559 aa3.29□□□□□ -1.88
SFSWAP-211ENST00000542813 EXOGQ9Y2C4 368 aaKnown RBP3.29□□□□□ -1.88
SFSWAP-211ENST00000542813 PCDHGB1Q9Y5G3 927 aa3.29□□□□□ -1.88
SFSWAP-211ENST00000542813 BZW2Q9Y6E2 419 aaKnown RBP3.29□□□□□ -1.88
SFSWAP-211ENST00000542813 EDC4Q6P2E9 1401 aaKnown RBP3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 CARMIL3Q8ND23 1372 aa3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 SH3TC1Q8TE82 1336 aa3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 TRBV7-9A0A0J9YWB2 115 aa3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 G3V2L1 256 aa3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 EIF3HO15372 352 aaKnown RBP eCLIP3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 BIRC5O15392 142 aa3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 ZNF749O43361 778 aa3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 CYTH3O43739 400 aa3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 PFKFB2O60825 505 aa3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 ATP5LO75964 103 aa3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 NXPH4O95158 308 aa3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 NUDT14O95848 222 aa3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 CSTAP01040 98 aa3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 PRSS1P07477 247 aa3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 FCGR3AP08637 254 aa3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 GCAP28676 217 aa3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 CD1BP29016 333 aa3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 PPP2R1BP30154 601 aa3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 S100A5P33763 92 aa3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 MMP12P39900 470 aa3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 OPRL1P41146 370 aa3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 NAMPTP43490 491 aa3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 STARP49675 285 aa3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 CRYBB1P53674 252 aaPredicted RBP3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 ACY1Q03154 408 aa3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 ASPHQ12797 758 aa3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 NECTIN1Q15223 517 aa3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 TGFBIQ15582 683 aa3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 STK11Q15831 433 aa3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 PPP1R3AQ16821 1122 aa3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 UPP1Q16831 310 aa3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 CCDC14Q49A88 953 aa3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 FFAR4Q5NUL3 377 aa3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 DCST2Q5T1A1 773 aa3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 SEL1L2Q5TEA6 688 aa3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 CST9Q5W186 159 aa3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 SPSB3Q6PJ21 355 aa3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 TMEM220Q6QAJ8 160 aa3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 STAC2Q6ZMT1 411 aa3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 C3P1Q6ZMU1 363 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms