RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 ATP1A1-AS1Q5TC04 95 aa22.24■■□□□ 1.15
TTC3-225ENST00000540756 AADACL4Q5VUY2 407 aa22.24■■□□□ 1.15
TTC3-225ENST00000540756 B3GLCTQ6Y288 498 aa22.24■■□□□ 1.15
TTC3-225ENST00000540756 DTX1Q86Y01 620 aa22.24■■□□□ 1.15
TTC3-225ENST00000540756 PTDSS2Q9BVG9 487 aa22.24■■□□□ 1.15
TTC3-225ENST00000540756 RPL36Q9Y3U8 105 aaKnown RBP22.24■■□□□ 1.15
TTC3-225ENST00000540756 EFCAB10A6NFE3 127 aa22.24■■□□□ 1.15
TTC3-225ENST00000540756 KDM4EB2RXH2 506 aaPredicted RBP22.24■■□□□ 1.15
TTC3-225ENST00000540756 PROB1E7EW31 1015 aa22.24■■□□□ 1.15
TTC3-225ENST00000540756 NDUFB2O95178 105 aa22.24■■□□□ 1.15
TTC3-225ENST00000540756 F10P00742 488 aa22.24■■□□□ 1.15
TTC3-225ENST00000540756 HMGN1P05114 100 aa22.24■■□□□ 1.15
TTC3-225ENST00000540756 IL11P20809 199 aa22.24■■□□□ 1.15
TTC3-225ENST00000540756 RBMS1P29558 406 aaKnown RBP22.24■■□□□ 1.15
TTC3-225ENST00000540756 GRK5P34947 590 aa22.24■■□□□ 1.15
TTC3-225ENST00000540756 RPS4XP62701 263 aaKnown RBP22.24■■□□□ 1.15
TTC3-225ENST00000540756 FOXF1Q12946 379 aa22.24■■□□□ 1.15
TTC3-225ENST00000540756 DOC2BQ14184 412 aa22.24■■□□□ 1.15
TTC3-225ENST00000540756 MEDAGQ5VYS4 303 aa22.24■■□□□ 1.15
TTC3-225ENST00000540756 H3F3CQ6NXT2 135 aa22.24■■□□□ 1.15
TTC3-225ENST00000540756 PLBD1Q6P4A8 553 aa22.24■■□□□ 1.15
TTC3-225ENST00000540756 BORAQ6PGQ7 559 aa22.24■■□□□ 1.15
TTC3-225ENST00000540756 NMD3Q96D46 503 aaKnown RBP22.24■■□□□ 1.15
TTC3-225ENST00000540756 THOC3Q96J01 351 aaKnown RBP22.24■■□□□ 1.15
TTC3-225ENST00000540756 TEX12Q9BXU0 123 aa22.24■■□□□ 1.15
TTC3-225ENST00000540756 PRRG3Q9BZD7 231 aa22.24■■□□□ 1.15
TTC3-225ENST00000540756 SH2D2AQ9NP31 389 aa22.24■■□□□ 1.15
TTC3-225ENST00000540756 HPF1Q9NWY4 346 aa22.24■■□□□ 1.15
TTC3-225ENST00000540756 DLL3Q9NYJ7 618 aa22.24■■□□□ 1.15
TTC3-225ENST00000540756 CNOT2Q9NZN8 540 aaKnown RBP22.24■■□□□ 1.15
TTC3-225ENST00000540756 IGLV3-32A0A0A0MS00 114 aa22.23■■□□□ 1.15
TTC3-225ENST00000540756 ZNF99A8MXY4 864 aaPredicted RBP22.23■■□□□ 1.15
TTC3-225ENST00000540756 ASAH2BP0C7U1 165 aa22.23■■□□□ 1.15
TTC3-225ENST00000540756 SRSF6Q13247 344 aaKnown RBP22.23■■□□□ 1.15
TTC3-225ENST00000540756 CYB561A3Q8NBI2 242 aa22.23■■□□□ 1.15
TTC3-225ENST00000540756 OR2M3Q8NG83 312 aa22.23■■□□□ 1.15
TTC3-225ENST00000540756 OR5M1Q8NGP8 315 aa22.23■■□□□ 1.15
TTC3-225ENST00000540756 ERMAPQ96PL5 475 aaPredicted RBP22.23■■□□□ 1.15
TTC3-225ENST00000540756 B3GNT4Q9C0J1 378 aa22.23■■□□□ 1.15
TTC3-225ENST00000540756 TNFSF12-TNFSF13A0A0A6YY99 330 aa22.23■■□□□ 1.15
TTC3-225ENST00000540756 PRODHO43272 600 aa22.23■■□□□ 1.15
TTC3-225ENST00000540756 NPIPB7O75200 414 aa22.23■■□□□ 1.15
TTC3-225ENST00000540756 PTHP01270 115 aa22.23■■□□□ 1.15
TTC3-225ENST00000540756 SLC6A6P31641 620 aa22.23■■□□□ 1.15
TTC3-225ENST00000540756 ACER2Q5QJU3 275 aa22.23■■□□□ 1.15
TTC3-225ENST00000540756 SHFQ7M4L6 423 aa22.23■■□□□ 1.15
TTC3-225ENST00000540756 CYP4Z2PQ8N1L4 340 aa22.23■■□□□ 1.15
TTC3-225ENST00000540756 RORBQ92753 470 aa22.23■■□□□ 1.15
TTC3-225ENST00000540756 TUBA1CQ9BQE3 449 aa22.23■■□□□ 1.15
TTC3-225ENST00000540756 KLHL1Q9NR64 748 aa22.23■■□□□ 1.15
TTC3-225ENST00000540756 CMC2Q9NRP2 79 aa22.23■■□□□ 1.15
TTC3-225ENST00000540756 CHRNA9Q9UGM1 479 aa22.23■■□□□ 1.15
TTC3-225ENST00000540756 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP22.23■■□□□ 1.15
TTC3-225ENST00000540756 IER3IP1Q9Y5U9 82 aa22.23■■□□□ 1.15
TTC3-225ENST00000540756 AKAP13Q12802 2813 aa22.22■■□□□ 1.15
TTC3-225ENST00000540756 EFNA2O43921 213 aa22.22■■□□□ 1.15
TTC3-225ENST00000540756 SLC25A12O75746 678 aa22.22■■□□□ 1.15
TTC3-225ENST00000540756 BGLAPP02818 100 aa22.22■■□□□ 1.15
TTC3-225ENST00000540756 NOS3P29474 1203 aa22.22■■□□□ 1.15
TTC3-225ENST00000540756 RPL4P36578 427 aaKnown RBP22.22■■□□□ 1.15
TTC3-225ENST00000540756 SUMO3P55854 103 aaPredicted RBP22.22■■□□□ 1.15
TTC3-225ENST00000540756 ATP6V1C2Q8NEY4 427 aa22.22■■□□□ 1.15
TTC3-225ENST00000540756 PAQR8Q8TEZ7 354 aa22.22■■□□□ 1.15
TTC3-225ENST00000540756 LIPHQ8WWY8 451 aa22.22■■□□□ 1.15
TTC3-225ENST00000540756 TMEM234Q8WY98 164 aa22.22■■□□□ 1.15
TTC3-225ENST00000540756 ST8SIA1Q92185 356 aa22.22■■□□□ 1.15
TTC3-225ENST00000540756 PTP4A1Q93096 173 aa22.22■■□□□ 1.15
TTC3-225ENST00000540756 SLC25A36Q96CQ1 311 aa22.22■■□□□ 1.15
TTC3-225ENST00000540756 GPN2Q9H9Y4 310 aaPredicted RBP22.22■■□□□ 1.15
TTC3-225ENST00000540756 SDHAF3Q9NRP4 125 aa22.22■■□□□ 1.15
TTC3-225ENST00000540756 CLEC2DQ9UHP7 191 aa22.22■■□□□ 1.15
TTC3-225ENST00000540756 LAMA5O15230 3695 aa22.22■■□□□ 1.15
TTC3-225ENST00000540756 MRPS14O60783 128 aaKnown RBP22.21■■□□□ 1.15
TTC3-225ENST00000540756 IGF2P01344 180 aa22.21■■□□□ 1.15
TTC3-225ENST00000540756 CLUP10909 449 aa22.21■■□□□ 1.15
TTC3-225ENST00000540756 PIPP12273 146 aaPredicted RBP22.21■■□□□ 1.15
TTC3-225ENST00000540756 ERVK-25P63136 954 aa22.21■■□□□ 1.15
TTC3-225ENST00000540756 IRF3Q14653 427 aa22.21■■□□□ 1.15
TTC3-225ENST00000540756 PLPPR5Q32ZL2 321 aa22.21■■□□□ 1.15
TTC3-225ENST00000540756 CXXC5Q7LFL8 322 aaKnown RBP22.21■■□□□ 1.15
TTC3-225ENST00000540756 RAB43Q86YS6 212 aa22.21■■□□□ 1.15
TTC3-225ENST00000540756 BEST3Q8N1M1 668 aa22.21■■□□□ 1.15
TTC3-225ENST00000540756 SVOPQ8N4V2 548 aa22.21■■□□□ 1.15
TTC3-225ENST00000540756 POC1BQ8TC44 478 aa22.21■■□□□ 1.15
TTC3-225ENST00000540756 LGALS12Q96DT0 336 aa22.21■■□□□ 1.15
TTC3-225ENST00000540756 RNFT2Q96EX2 444 aa22.21■■□□□ 1.15
TTC3-225ENST00000540756 FRMD6Q96NE9 622 aa22.21■■□□□ 1.15
TTC3-225ENST00000540756 YIPF3Q9GZM5 350 aa22.21■■□□□ 1.15
TTC3-225ENST00000540756 CPNE5Q9HCH3 593 aa22.21■■□□□ 1.15
TTC3-225ENST00000540756 FREM3P0C091 2139 aa22.21■■□□□ 1.15
TTC3-225ENST00000540756 TRAV36DV7A0A075B6V5 113 aa22.21■■□□□ 1.15
TTC3-225ENST00000540756 IQCJ-SCHIP1C9J366 451 aaPredicted RBP22.21■■□□□ 1.15
TTC3-225ENST00000540756 IMPA2O14732 288 aa22.21■■□□□ 1.15
TTC3-225ENST00000540756 F13BP05160 661 aa22.21■■□□□ 1.15
TTC3-225ENST00000540756 PEPDP12955 493 aa22.21■■□□□ 1.15
TTC3-225ENST00000540756 HIST1H1CP16403 213 aaKnown RBP22.21■■□□□ 1.15
TTC3-225ENST00000540756 ACVR2AP27037 513 aa22.21■■□□□ 1.15
TTC3-225ENST00000540756 PSMB9P28065 219 aa22.21■■□□□ 1.15
TTC3-225ENST00000540756 CDH11P55287 796 aa22.21■■□□□ 1.15
TTC3-225ENST00000540756 CRMP1Q14194 572 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms