RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 EXO5Q9H790 373 aa8.06□□□□□ -1.12
DDB1-217ENST00000540166 ISYNA1Q9NPH2 558 aa8.06□□□□□ -1.12
DDB1-217ENST00000540166 MED9Q9NWA0 146 aa8.06□□□□□ -1.12
DDB1-217ENST00000540166 CHD8Q9HCK8 2581 aa8.05□□□□□ -1.12
DDB1-217ENST00000540166 TRBV23OR9-2A0A075B6M9 112 aa8.05□□□□□ -1.12
DDB1-217ENST00000540166 A0A0B4J203 849 aa8.05□□□□□ -1.12
DDB1-217ENST00000540166 C1QCP02747 245 aa8.05□□□□□ -1.12
DDB1-217ENST00000540166 GABRA1P14867 456 aa8.05□□□□□ -1.12
DDB1-217ENST00000540166 ART1P52961 327 aa8.05□□□□□ -1.12
DDB1-217ENST00000540166 MESP2Q0VG99 397 aa8.05□□□□□ -1.12
DDB1-217ENST00000540166 GAB1Q13480 694 aa8.05□□□□□ -1.12
DDB1-217ENST00000540166 INSL4Q14641 139 aa8.05□□□□□ -1.12
DDB1-217ENST00000540166 DEFB133Q30KQ1 61 aa8.05□□□□□ -1.12
DDB1-217ENST00000540166 PABPC1L2AQ5JQF8 200 aa8.05□□□□□ -1.12
DDB1-217ENST00000540166 KRBOX4Q5JUW0 171 aa8.05□□□□□ -1.12
DDB1-217ENST00000540166 FIP1L1Q6UN15 594 aaKnown RBP8.05□□□□□ -1.12
DDB1-217ENST00000540166 MACC1Q6ZN28 852 aa8.05□□□□□ -1.12
DDB1-217ENST00000540166 NAA40Q86UY6 237 aa8.05□□□□□ -1.12
DDB1-217ENST00000540166 PARGQ86W56 976 aa8.05□□□□□ -1.12
DDB1-217ENST00000540166 MEX3DQ86XN8 651 aaKnown RBP8.05□□□□□ -1.12
DDB1-217ENST00000540166 CHST14Q8NCH0 376 aa8.05□□□□□ -1.12
DDB1-217ENST00000540166 OR4C15Q8NGM1 316 aa8.05□□□□□ -1.12
DDB1-217ENST00000540166 OR52N1Q8NH53 320 aa8.05□□□□□ -1.12
DDB1-217ENST00000540166 PTDSS2Q9BVG9 487 aa8.05□□□□□ -1.12
DDB1-217ENST00000540166 GPR34Q9UPC5 381 aa8.05□□□□□ -1.12
DDB1-217ENST00000540166 CA5BQ9Y2D0 317 aa8.05□□□□□ -1.12
DDB1-217ENST00000540166 RPH3AQ9Y2J0 694 aaPredicted RBP8.05□□□□□ -1.12
DDB1-217ENST00000540166 CCL27Q9Y4X3 112 aa8.05□□□□□ -1.12
DDB1-217ENST00000540166 LINC01387J3KSC0 135 aa8.05□□□□□ -1.12
DDB1-217ENST00000540166 ATP1B2P14415 290 aaPredicted RBP8.05□□□□□ -1.12
DDB1-217ENST00000540166 CXCL2P19875 107 aa8.05□□□□□ -1.12
DDB1-217ENST00000540166 RAD52P43351 418 aa8.05□□□□□ -1.12
DDB1-217ENST00000540166 OMPP47874 163 aa8.05□□□□□ -1.12
DDB1-217ENST00000540166 ADPRHP54922 357 aa8.05□□□□□ -1.12
DDB1-217ENST00000540166 RPS26P62854 115 aaKnown RBP8.05□□□□□ -1.12
DDB1-217ENST00000540166 HBA1P69905 142 aa8.05□□□□□ -1.12
DDB1-217ENST00000540166 EIF2S3LQ2VIR3 472 aaKnown RBP8.05□□□□□ -1.12
DDB1-217ENST00000540166 RPS26P11Q5JNZ5 115 aaPredicted RBP8.05□□□□□ -1.12
DDB1-217ENST00000540166 B3GNTL1Q67FW5 361 aaPredicted RBP8.05□□□□□ -1.12
DDB1-217ENST00000540166 TMED4Q7Z7H5 227 aa8.05□□□□□ -1.12
DDB1-217ENST00000540166 DCUN1D3Q8IWE4 304 aa8.05□□□□□ -1.12
DDB1-217ENST00000540166 OR5D16Q8NGK9 328 aa8.05□□□□□ -1.12
DDB1-217ENST00000540166 OR5M9Q8NGP3 310 aa8.05□□□□□ -1.12
DDB1-217ENST00000540166 WFDC5Q8TCV5 224 aa8.05□□□□□ -1.12
DDB1-217ENST00000540166 ELP5Q8TE02 316 aa8.05□□□□□ -1.12
DDB1-217ENST00000540166 ACOT11Q8WXI4 607 aaPredicted RBP8.05□□□□□ -1.12
DDB1-217ENST00000540166 SCAMP4Q969E2 229 aa8.05□□□□□ -1.12
DDB1-217ENST00000540166 SLC12A9Q9BXP2 914 aa8.05□□□□□ -1.12
DDB1-217ENST00000540166 ZNF629Q9UEG4 869 aaPredicted RBP8.05□□□□□ -1.12
DDB1-217ENST00000540166 RNF13O43567 381 aa8.05□□□□□ -1.12
DDB1-217ENST00000540166 ANXA7P20073 488 aaKnown RBP8.05□□□□□ -1.12
DDB1-217ENST00000540166 ELAVL4P26378 380 aaKnown RBP8.05□□□□□ -1.12
DDB1-217ENST00000540166 AOAHP28039 575 aa8.05□□□□□ -1.12
DDB1-217ENST00000540166 RFX3P48380 749 aa8.05□□□□□ -1.12
DDB1-217ENST00000540166 CCR9P51686 369 aa8.05□□□□□ -1.12
DDB1-217ENST00000540166 HSPB3Q12988 150 aa8.05□□□□□ -1.12
DDB1-217ENST00000540166 FZD5Q13467 585 aa8.05□□□□□ -1.12
DDB1-217ENST00000540166 SNTB1Q13884 538 aaKnown RBP8.05□□□□□ -1.12
DDB1-217ENST00000540166 NR0B2Q15466 257 aa8.05□□□□□ -1.12
DDB1-217ENST00000540166 TRAM1Q15629 374 aa8.05□□□□□ -1.12
DDB1-217ENST00000540166 TMEM69Q5SWH9 247 aa8.05□□□□□ -1.12
DDB1-217ENST00000540166 SMAP2Q8WU79 429 aaPredicted RBP8.05□□□□□ -1.12
DDB1-217ENST00000540166 CCDC107Q8WV48 283 aa8.05□□□□□ -1.12
DDB1-217ENST00000540166 INTS12Q96CB8 462 aaKnown RBP8.05□□□□□ -1.12
DDB1-217ENST00000540166 CAMK1GQ96NX5 476 aa8.05□□□□□ -1.12
DDB1-217ENST00000540166 ANKRD19PQ9H560 264 aa8.05□□□□□ -1.12
DDB1-217ENST00000540166 AHSPQ9NZD4 102 aa8.05□□□□□ -1.12
DDB1-217ENST00000540166 NEUROG3Q9Y4Z2 214 aa8.05□□□□□ -1.12
DDB1-217ENST00000540166 TRBV23-1A0A0A0MS06 115 aa8.04□□□□□ -1.12
DDB1-217ENST00000540166 A0A1B0GUH1 482 aa8.04□□□□□ -1.12
DDB1-217ENST00000540166 POM121BA6NF01 834 aa8.04□□□□□ -1.12
DDB1-217ENST00000540166 SUSD5O60279 629 aa8.04□□□□□ -1.12
DDB1-217ENST00000540166 CD79BP40259 229 aa8.04□□□□□ -1.12
DDB1-217ENST00000540166 MNDAP41218 407 aa8.04□□□□□ -1.12
DDB1-217ENST00000540166 ACTR1BP42025 376 aa8.04□□□□□ -1.12
DDB1-217ENST00000540166 LIMK1P53667 647 aa8.04□□□□□ -1.12
DDB1-217ENST00000540166 TAS2R50P59544 299 aa8.04□□□□□ -1.12
DDB1-217ENST00000540166 ACTR1AP61163 376 aa8.04□□□□□ -1.12
DDB1-217ENST00000540166 AIMP2Q13155 320 aaKnown RBP8.04□□□□□ -1.12
DDB1-217ENST00000540166 LIPJQ5W064 366 aa8.04□□□□□ -1.12
DDB1-217ENST00000540166 ACSM5Q6NUN0 579 aa8.04□□□□□ -1.12
DDB1-217ENST00000540166 TPRA1Q86W33 373 aa8.04□□□□□ -1.12
DDB1-217ENST00000540166 TRAPPC5Q8IUR0 188 aa8.04□□□□□ -1.12
DDB1-217ENST00000540166 GNPDA2Q8TDQ7 276 aa8.04□□□□□ -1.12
DDB1-217ENST00000540166 WDR92Q96MX6 357 aa8.04□□□□□ -1.12
DDB1-217ENST00000540166 GAL3ST1Q99999 423 aa8.04□□□□□ -1.12
DDB1-217ENST00000540166 WDR77Q9BQA1 342 aaPredicted RBP8.04□□□□□ -1.12
DDB1-217ENST00000540166 GSN-AS1Q9NRJ2 163 aa8.04□□□□□ -1.12
DDB1-217ENST00000540166 RXFP3Q9NSD7 469 aa8.04□□□□□ -1.12
DDB1-217ENST00000540166 POT1Q9NUX5 634 aa8.04□□□□□ -1.12
DDB1-217ENST00000540166 SLCO1C1Q9NYB5 712 aa8.04□□□□□ -1.12
DDB1-217ENST00000540166 LHX3Q9UBR4 397 aa8.04□□□□□ -1.12
DDB1-217ENST00000540166 ASCC3Q8N3C0 2202 aaKnown RBP8.04□□□□□ -1.12
DDB1-217ENST00000540166 AHCTF1Q8WYP5 2266 aa8.04□□□□□ -1.12
DDB1-217ENST00000540166 NPIPB15A6NHN6 443 aaPredicted RBP8.04□□□□□ -1.12
DDB1-217ENST00000540166 MPTX1A8MV57 137 aa8.04□□□□□ -1.12
DDB1-217ENST00000540166 EIF3GO75821 320 aaKnown RBP eCLIP8.04□□□□□ -1.12
DDB1-217ENST00000540166 KLK1P06870 262 aa8.04□□□□□ -1.12
DDB1-217ENST00000540166 ATP5A1P25705 553 aaKnown RBP8.04□□□□□ -1.12
DDB1-217ENST00000540166 LUMP51884 338 aaPredicted RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms