RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 LOXL4Q96JB6 756 aa11.65□□□□□ -0.54
DDX55-206ENST00000539934 SLC38A2Q96QD8 506 aa11.65□□□□□ -0.54
DDX55-206ENST00000539934 RIOK2Q9BVS4 552 aaKnown RBP11.65□□□□□ -0.54
DDX55-206ENST00000539934 MMP28Q9H239 520 aa11.65□□□□□ -0.54
DDX55-206ENST00000539934 EMC7Q9NPA0 242 aa11.65□□□□□ -0.54
DDX55-206ENST00000539934 CHST11Q9NPF2 352 aa11.65□□□□□ -0.54
DDX55-206ENST00000539934 DNAJB11Q9UBS4 358 aa11.65□□□□□ -0.54
DDX55-206ENST00000539934 ASB1Q9Y576 335 aa11.65□□□□□ -0.54
DDX55-206ENST00000539934 A0A1B0GTL3 188 aa11.64□□□□□ -0.55
DDX55-206ENST00000539934 SCN2BO60939 215 aa11.64□□□□□ -0.55
DDX55-206ENST00000539934 ICOSLGO75144 302 aa11.64□□□□□ -0.55
DDX55-206ENST00000539934 OR8U8P0C7N1 319 aa11.64□□□□□ -0.55
DDX55-206ENST00000539934 PEPDP12955 493 aa11.64□□□□□ -0.55
DDX55-206ENST00000539934 PRDX3P30048 256 aaKnown RBP11.64□□□□□ -0.55
DDX55-206ENST00000539934 SSTR2P30874 369 aa11.64□□□□□ -0.55
DDX55-206ENST00000539934 MC2RQ01718 297 aa11.64□□□□□ -0.55
DDX55-206ENST00000539934 LARS2Q15031 903 aaKnown RBP11.64□□□□□ -0.55
DDX55-206ENST00000539934 HIKESHIQ53FT3 197 aa11.64□□□□□ -0.55
DDX55-206ENST00000539934 HENMT1Q5T8I9 393 aaKnown RBP11.64□□□□□ -0.55
DDX55-206ENST00000539934 PAMR1Q6UXH9 720 aa11.64□□□□□ -0.55
DDX55-206ENST00000539934 LARP4Q71RC2 724 aaKnown RBP eCLIP11.64□□□□□ -0.55
DDX55-206ENST00000539934 PXKQ7Z7A4 578 aa11.64□□□□□ -0.55
DDX55-206ENST00000539934 SFTPA1Q8IWL2 248 aa11.64□□□□□ -0.55
DDX55-206ENST00000539934 TRIM48Q8IWZ4 208 aa11.64□□□□□ -0.55
DDX55-206ENST00000539934 ARMC10Q8N2F6 343 aa11.64□□□□□ -0.55
DDX55-206ENST00000539934 FRMD1Q8N878 549 aa11.64□□□□□ -0.55
DDX55-206ENST00000539934 DNAJB14Q8TBM8 379 aa11.64□□□□□ -0.55
DDX55-206ENST00000539934 SKA2Q8WVK7 121 aaPredicted RBP11.64□□□□□ -0.55
DDX55-206ENST00000539934 HGDQ93099 445 aa11.64□□□□□ -0.55
DDX55-206ENST00000539934 ZC3HAV1LQ96H79 300 aaKnown RBP11.64□□□□□ -0.55
DDX55-206ENST00000539934 C3orf30Q96M34 536 aa11.64□□□□□ -0.55
DDX55-206ENST00000539934 CNN2Q99439 309 aaKnown RBP11.64□□□□□ -0.55
DDX55-206ENST00000539934 WRAP53Q9BUR4 548 aaKnown RBP11.64□□□□□ -0.55
DDX55-206ENST00000539934 DGCR6LQ9BY27 220 aa11.64□□□□□ -0.55
DDX55-206ENST00000539934 ZFP64Q9NPA5 681 aa11.64□□□□□ -0.55
DDX55-206ENST00000539934 BTRCQ9Y297 605 aa11.64□□□□□ -0.55
DDX55-206ENST00000539934 NR5A2O00482 541 aa11.64□□□□□ -0.55
DDX55-206ENST00000539934 FABP7O15540 132 aa11.64□□□□□ -0.55
DDX55-206ENST00000539934 KLF4O43474 513 aa11.64□□□□□ -0.55
DDX55-206ENST00000539934 LPLP06858 475 aa11.64□□□□□ -0.55
DDX55-206ENST00000539934 BCKDHBP21953 392 aa11.64□□□□□ -0.55
DDX55-206ENST00000539934 NDUFS1P28331 727 aa11.64□□□□□ -0.55
DDX55-206ENST00000539934 GJA4P35212 333 aa11.64□□□□□ -0.55
DDX55-206ENST00000539934 MAGEA2P43356 314 aa11.64□□□□□ -0.55
DDX55-206ENST00000539934 ADARB1P78563 741 aaKnown RBP11.64□□□□□ -0.55
DDX55-206ENST00000539934 ELAVL3Q14576 367 aaKnown RBP11.64□□□□□ -0.55
DDX55-206ENST00000539934 PCBP2Q15366 365 aaKnown RBP eCLIP11.64□□□□□ -0.55
DDX55-206ENST00000539934 SLC9A3R2Q15599 337 aa11.64□□□□□ -0.55
DDX55-206ENST00000539934 C18orf21Q32NC0 220 aaPredicted RBP11.64□□□□□ -0.55
DDX55-206ENST00000539934 TMEM196Q5HYL7 178 aa11.64□□□□□ -0.55
DDX55-206ENST00000539934 LEMD1Q68G75 181 aa11.64□□□□□ -0.55
DDX55-206ENST00000539934 OR8G2PQ6IF36 304 aa11.64□□□□□ -0.55
DDX55-206ENST00000539934 SPRED1Q7Z699 444 aa11.64□□□□□ -0.55
DDX55-206ENST00000539934 CPOQ8IVL8 374 aa11.64□□□□□ -0.55
DDX55-206ENST00000539934 RGL4Q8IZJ4 473 aa11.64□□□□□ -0.55
DDX55-206ENST00000539934 OFCC1Q8IZS5 231 aa11.64□□□□□ -0.55
DDX55-206ENST00000539934 SVBPQ8N300 66 aa11.64□□□□□ -0.55
DDX55-206ENST00000539934 OR4Q3Q8NH05 313 aa11.64□□□□□ -0.55
DDX55-206ENST00000539934 PHYHIPQ92561 330 aa11.64□□□□□ -0.55
DDX55-206ENST00000539934 PPP1R16AQ96I34 528 aa11.64□□□□□ -0.55
DDX55-206ENST00000539934 FBXL20Q96IG2 436 aa11.64□□□□□ -0.55
DDX55-206ENST00000539934 MESP1Q9BRJ9 268 aa11.64□□□□□ -0.55
DDX55-206ENST00000539934 ZNF430Q9H8G1 570 aaPredicted RBP11.64□□□□□ -0.55
DDX55-206ENST00000539934 AKTIPQ9H8T0 292 aa11.64□□□□□ -0.55
DDX55-206ENST00000539934 TMEM138Q9NPI0 162 aa11.64□□□□□ -0.55
DDX55-206ENST00000539934 WIF1Q9Y5W5 379 aa11.64□□□□□ -0.55
DDX55-206ENST00000539934 PTGDR2Q9Y5Y4 395 aa11.64□□□□□ -0.55
DDX55-206ENST00000539934 A0A075B6Q4 140 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 A0A1B0GW55 424 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 OR6C68A6NDL8 312 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 A8MWP6 167 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 NPIPB9F8W1W9 429 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 SOCS6O14544 535 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 XPNPEP2O43895 674 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 GLCEO94923 617 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 OR4F21O95013 312 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 CFDP00746 253 aaPredicted RBP11.63□□□□□ -0.55
DDX55-206ENST00000539934 LINC00032P0C843 101 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 DUX4L2P0CJ85 424 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 DUX4L3P0CJ86 424 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 DUX4L4P0CJ87 422 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 DUX4L5P0CJ88 424 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 DUX4L6P0CJ89 424 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 DUX4L7P0CJ90 424 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 UROSP10746 265 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 GABRR1P24046 479 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 ITGB7P26010 798 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 OPRD1P41143 372 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 CSNK1EP49674 416 aaKnown RBP11.63□□□□□ -0.55
DDX55-206ENST00000539934 TDGF1P3P51864 188 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 MS4A2Q01362 244 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 SCN1BQ07699 218 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 GTF2H2Q13888 395 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 HAGHQ16775 308 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 TM4SF20Q53R12 229 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 CYBRD1Q53TN4 286 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 GTF2H2CQ6P1K8 395 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 SHISA2Q6UWI4 295 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 HSDL2Q6YN16 418 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 TECPR1Q7Z6L1 1165 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms